mRNA_D-herbacea_F_contig110.910.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: D8LTY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY0_ECTSI) HSP 1 Score: 252 bits (643), Expect = 2.260e-76 Identity = 145/223 (65.02%), Postives = 160/223 (71.75%), Query Frame = 2
Query: 356 APSQSSARMSRALLVSGGAGSAXXXXTAGGVSSG-PSGFGLGSAWGVLSVVFILMNAVKRLAPIALQPFSRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLD-------SRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPEEAK 1000
AP + M +AL V+GG A G G P+GFG+ SAWGV+SVVFILMNAVKRLAPIA+QPFSR GFQKKFSPLVVKRALTLD + GG AGPLRL+LAGPYSMGLFHATKKR+TVSW+LTAGVLCLVQ+VKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARA++GKAP+IDPALPEE K
Sbjct: 117 APKNTLPLMGKALFVTGGGAGA------GAAGKGEPAGFGVASAWGVVSVVFILMNAVKRLAPIAMQPFSRASL----------------------GFQKKFSPLVVKRALTLDQAAAAVPAADGGQKRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEEKK 311
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A836CIU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIU2_9STRA) HSP 1 Score: 225 bits (573), Expect = 1.500e-66 Identity = 123/217 (56.68%), Postives = 151/217 (69.59%), Query Frame = 2
Query: 353 GAPSQSSARMSRALLVSGGAGSAXXXXTAGGVSSGPSGFGLGSAWGVLSVVFILMNAVKRLAPIALQPFSRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPEEAKA 1003
G ++ +R++ AL +SGGA + + +SG S FGL SAWGVLSV+ IL NAVKRLAPIA+QPF GD W MY FA LMAYAEG+K FQKKFSP+VV+RALTLD +AGPLRL+LAGPYSMGLFHA++KR+ VSW L+ VL LVQ V++LPYPWRSI+D GVV GLS+G+ +I W R+ G P +D LP E A
Sbjct: 61 GCSAERRSRLATALRMSGGAAADDNTVAS---TSGRSSFGLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDK---------SAGPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLPLEEPA 265
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A6H5KSH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSH0_9PHAE) HSP 1 Score: 214 bits (545), Expect = 3.620e-64 Identity = 109/141 (77.30%), Postives = 121/141 (85.82%), Query Frame = 2
Query: 593 MYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGA-------AGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPEE 994
MY F+A+MAYAEGFKGFQ+KFSPLVVKRALTLD AGPLRL+LAGPYSMGLFHATKKR+TVSW+LTAGVLCLVQ+VKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARA++G+AP+IDPALPE+
Sbjct: 1 MYAGFSAIMAYAEGFKGFQQKFSPLVVKRALTLDPAAXXXXXXXXXXXXXXRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAVLGRAPSIDPALPEK 141
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A835ZF77_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF77_9STRA) HSP 1 Score: 209 bits (533), Expect = 3.570e-61 Identity = 105/177 (59.32%), Postives = 128/177 (72.32%), Query Frame = 2
Query: 461 SGFGLGSAWGVLSVVFILMNAVKRLAPIALQPFSRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPE 991
S FG SAWGVLSV+ IL A++RL PIALQPF GD + WA+Y F ALMAY EG K FQKKFSP+VV+RALTLD A + GPLR+ILAGPY MGLF+AT+KR+ VSW L V+ LV +V++LPYPWRSI+DAGVV GLS+G +I W R+ G+AP +D +PE
Sbjct: 45 SSFGFASAWGVLSVLSILAGALRRLVPIALQPFKAGDLSYGHWALYMSFVALMAYVEGHKAFQKKFSPMVVQRALTLDQ------ARTSFGPLRIILAGPYCMGLFYATRKRKIVSWTLYISVIALVTVVRQLPYPWRSIIDAGVVAGLSWGASAILYFWVRSWFGRAPGVDAQMPE 215
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A7S3SW48_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SW48_EMIHU) HSP 1 Score: 191 bits (485), Expect = 6.570e-54 Identity = 99/177 (55.93%), Postives = 124/177 (70.06%), Query Frame = 2
Query: 470 GLGSAWGVLSVVFILMNAVKRLAPIALQPFSRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPEEAK 1000
GL +AWGV + IL A+ RLAPIA+QP + D +QW +YG A AY EG+K FQ KFSPLVV+RA+TL +R S L +LA YSMGLFHA+KKR+TVSW+++ GV C++ LVKRLPYPWRS+VDAGV GL +G SI VI+ RAL GK+P +DP LP+E K
Sbjct: 72 GLRTAWGVCGFLGILAQAIGRLAPIAMQPILQRDITMLQWGLYGGTMAFFAYTEGYKAFQCKFSPLVVQRAMTLSTR------SPPPPLLHSVLAPFYSMGLFHASKKRKTVSWSISLGVACIIGLVKRLPYPWRSVVDAGVCTGLLWGGTSIGVIYLRALAGKSPGVDPELPKEDK 242
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: W7TVP9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVP9_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.350e-53 Identity = 105/184 (57.07%), Postives = 128/184 (69.57%), Query Frame = 2
Query: 467 FGLGSAWGVLSVVFILMNAVKRLAPIALQPFSRGD----FNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPL-RLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPEEAKA 1003
F L + WGV+ VV +L NA++RL PIAL+PF + F + WA Y FA +MAYAEG+KGFQ KFSPLVVKRALTL R PL +LA PYSMGLFHA+KKR+ VSW + GV+ LV+ VK L +P+RSIVDAGVV GLS+G LSI I+A+AL G P+IDPALP+ KA
Sbjct: 116 FSLSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGPRS----------PLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPDVKKA 289
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A0M0JX49_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JX49_9EUKA) HSP 1 Score: 183 bits (465), Expect = 2.970e-51 Identity = 92/176 (52.27%), Postives = 120/176 (68.18%), Query Frame = 2
Query: 470 GLGSAWGVLSVVFILMNAVKRLAPIALQPFSRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPEEA 997
G+ AWGV + IL +A+KRLAPIA+QPF + D + +QW YG + AY EG+ FQKKFSPLVV+RA+TL + P+ + LA YSMGL HATKKR+ VSW+++ V +V +VKRLPYPWRSIVDAGV GL++G +SI +I+ARAL G P +DP LP +
Sbjct: 55 GIAVAWGVCGFLGILASAIKRLAPIAMQPFLQRDLSWLQWGFYGGSMGIFAYVEGYGAFQKKFSPLVVERAMTLKQ---------STSPVHIALAPFYSMGLMHATKKRKIVSWSVSMSVAMVVGIVKRLPYPWRSIVDAGVCTGLAWGAVSIVIIYARALAGTPPGVDPCLPSSS 221
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A7R9U4X8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4X8_9STRA) HSP 1 Score: 184 bits (467), Expect = 6.940e-51 Identity = 99/202 (49.01%), Postives = 126/202 (62.38%), Query Frame = 2
Query: 404 GGAGSAXXXXTAGGVSSGPSGFGLG---SAWGVLSVVFILMNAVKRLAPIALQPFSRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPEEAK 1000
GG G A AGG SS S G G + WGVL V ++L+N ++RL PIA++PF RGDF WA Y FA MAYAEG KGFQKKF P VV+RA L G+ PL I A + MGLFHA+KKR+ +SW+L GV ++Q+ KRL YPW +IVDAG VVGL +G +S+ + R+L G+ P+I LP E +
Sbjct: 79 GGTGPAKATVAAGGASSEASAVGYGGVAATWGVLGVFYVLLNGLRRLVPIAVEPFQRGDFGLGLWAAYAGFAVFMAYAEGVKGFQKKFCPFVVRRAQLLK---------GSTNPLHCIFAPFFCMGLFHASKKRKILSWSLLIGVFGIIQVAKRLAYPWNAIVDAGAVVGLGWGCISLGATYVRSLFGQVPSISAELPSETE 271
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A8J6CDI7_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDI7_DIALT) HSP 1 Score: 171 bits (433), Expect = 1.290e-46 Identity = 90/170 (52.94%), Postives = 112/170 (65.88%), Query Frame = 2
Query: 479 SAWGVLSVVFILMNAVKRLAPIALQPFSRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALP 988
S WGV+ V+ IL NA+ RLAPIA +PF G + WA Y A AY EG+K FQ KFSPLVV RA TL + G A A LR +LA YSMGLFHAT+KR+ +SW ++ V+ +V +VKRLPYPWRSIVDAGVV GL++G SI I+ +A+ G P + LP
Sbjct: 53 SHWGVVGVMAILANAIGRLAPIAAEPFRYGGLAPLHWASYAATIAAFAYVEGYKAFQLKFSPLVVSRAFTLGPQGGRATA------LRSVLAPFYSMGLFHATRKRKVISWTISLAVIVIVGVVKRLPYPWRSIVDAGVVAGLTWGVTSIGWIYVKAIGGSLPNVSTELP 216
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A7S2WJT5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJT5_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.880e-46 Identity = 92/179 (51.40%), Postives = 115/179 (64.25%), Query Frame = 2
Query: 458 PSGFGLGSAWGVLSVVFILMNAVKRLAPIALQPF-SRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALM-GKAPAIDPALP 988
P GF + S WG L V++IL N +KRL P+ALQPF S GD +A+ W Y ++ M Y EG+K FQ KF PLVV RA TL+ + G LR LA YSMGLFHA+KKR VSW+ G+ +V VKRLPYPWRSI+D GVV GLS+G SI ++ R + G+ P +DP LP
Sbjct: 121 PLGF-IASTWGALGVMYILANPIKRLLPVALQPFASPGDLSAMHWVAYALWCVFMGYTEGYKAFQLKFCPLVVSRAATLERQD----CRGPGWWLRAALAPLYSMGLFHASKKRLIVSWSFVIGISAIVATVKRLPYPWRSIIDGGVVFGLSWGAASIAYLYLRKIFTGQIPEVDPQLP 294 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig110.910.1 >prot_D-herbacea_F_contig110.910.1 ID=prot_D-herbacea_F_contig110.910.1|Name=mRNA_D-herbacea_F_contig110.910.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=294bp MRVIGVVVLAMSGVLSASGSSGSRSLAFVGAATPASPQAFRASGGRHFGRback to top mRNA from alignment at D-herbacea_F_contig110:586076..590319- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig110.910.1 ID=mRNA_D-herbacea_F_contig110.910.1|Name=mRNA_D-herbacea_F_contig110.910.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=4244bp|location=Sequence derived from alignment at D-herbacea_F_contig110:586076..590319- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig110:586076..590319- >mRNA_D-herbacea_F_contig110.910.1 ID=mRNA_D-herbacea_F_contig110.910.1|Name=mRNA_D-herbacea_F_contig110.910.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1764bp|location=Sequence derived from alignment at D-herbacea_F_contig110:586076..590319- (Desmarestia herbacea DmunF female)back to top |