mRNA_D-herbacea_F_contig1077.698.1 (mRNA) Desmarestia herbacea DmunF female
|
Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 439 bits (1130), Expect = 1.340e-148 Identity = 210/329 (63.83%), Postives = 251/329 (76.29%), Query Frame = 1
Query: 4 LDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP 990
LDD+ + + +P ++ KWLLT++L + G++FYCRG+SIGGDCDELRIQSTG TDFHEVR HGGS+YFE+T+VTSWDTPNK+PQ Y GRSF+NCVSE + E C GQ QN+ GECRMDII SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ SDIHH YYG YSYG QGGVW NN+MHDNHQYGFDPHDDSDYLT +GG A GIFLHRSSD V+DNVVHDMQDAGMA++ES +ADI++N F++VK+GIR+SLG N+V++N+F+ S GLYTYQGSD P
Sbjct: 111 LDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVY------------DGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEP 427
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 445 bits (1144), Expect = 4.250e-146 Identity = 207/330 (62.73%), Postives = 246/330 (74.55%), Query Frame = 1
Query: 1 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP 990
+LDD+ + P+ +T WLL ++L++ G +FYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK PQ+ YENGRSF+NCVSE + + CEG +N+ GECRMDII SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLTIA +GG+ A GIFLHRSSD V+DN + +MQDAG+A++ESFDA I+ N KYGIR+SLG GNN VY N F S+YGLYTY+GSD P
Sbjct: 473 MLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEP 802
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 415 bits (1067), Expect = 6.860e-140 Identity = 203/339 (59.88%), Postives = 242/339 (71.39%), Query Frame = 1
Query: 1 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP 990
+LD + + +PTSVT KWLL ++L+V G+IFYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDTPNK PQ+ YE GRSF+NCVSE + ETC+G +ND GECRMDII SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYG QGGVWTNN+MHDNHQY +A +GG AVGIFLHRSSD+ EVY N + +M DAG+A++ESF+ADIHDN V++GIR+SLG G N+VYDN F+ CS +GLYTY GSD P
Sbjct: 46 MLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEP 372
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 406 bits (1043), Expect = 7.490e-138 Identity = 196/326 (60.12%), Postives = 234/326 (71.78%), Query Frame = 1
Query: 1 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSK 954
+LDD+ + P+ +T WLL ++L++ G +FYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK PQ+ YE GRSF+NCVSE + + CEG +N+ GECRMDII SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLT +GG+ AVGIFLHRSSD V+DN + +MQDAG+A++E+FDA I+ NT KYGIR+SLG GNN VY N F S+
Sbjct: 22 MLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVR------------DGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 393 bits (1010), Expect = 1.600e-131 Identity = 189/331 (57.10%), Postives = 231/331 (69.79%), Query Frame = 1
Query: 1 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEY-ESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP 990
+LD ND + + T+ TGKWLLT+DLFV G+ YCRG +GG+C ELRI+ST +DF E+RGHGG+LYFE+T+VTSWD + PQ+ Y++GRSFI CVSE ++TC N+ GECRMDII SEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+K SDIHHMYYGMYS+G QGGVWTNN MHDNHQYGFDPHDDSDYL IA +GG+ A GIFLHRS D EVY N + +M DAG+A++E+ DIHDN ++GIR+ LG NN V+DNVF G++TY GSD P
Sbjct: 35 VLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEP 362
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 379 bits (974), Expect = 3.250e-127 Identity = 191/263 (72.62%), Postives = 220/263 (83.65%), Query Frame = 1
Query: 1 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVY 789
+LDD+ + + SPTSVT KWLL S+L+V G+IFYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDTPNK PQ+ YE GRSF+NCVSE + ETC+G+ +ND GECRMDII SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYG QGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX +GG +AVGIFLHRSSD+ EVY
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVY 263
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 365 bits (936), Expect = 1.480e-115 Identity = 185/332 (55.72%), Postives = 225/332 (67.77%), Query Frame = 1
Query: 1 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESD--ETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP 990
+LD ND+++ S TG WLL D+ V +GS+ G GGD LRIQSTGS D++E+RGHGGSL F +T VTSWDT K +Y+ RSFI CVSE +D +TC+G N GECRMDII SEMG +G+ +ESYG++WKVRG+C++ NPEVF+ T V GDI +SDI+ MYYG YS+G GG+WT NKMHDN QYGFDPHDDSD L IA +GG AVGIFLHRSSD CEV+ N V+DM+DAGMAIMES A IHDNTFTNVKYGIR+S+G N V +N F +C +YG+YTYQG+D P
Sbjct: 428 VLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKP 757
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 346 bits (887), Expect = 1.390e-110 Identity = 179/338 (52.96%), Postives = 229/338 (67.75%), Query Frame = 1
Query: 1 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDET--CEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP 990
+LD+N+D++ + TG WLL +L V+ GS GT+ GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N ++ +GRSFINCV++++ C+G+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C N E+F+ NVYGDI NS+I+ MYYG YSYG QGGVW +N M DN QYGFDPHDDSD LTI+ +GG AVGIFLHRSSD EV+DNVV++MQDAGMA+MES+DA+I+DN+FTN +YGIR+SLG G N + +N+F ++YGLYTY GSD P
Sbjct: 216 VLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDP 550
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 327 bits (837), Expect = 1.320e-104 Identity = 167/326 (51.23%), Postives = 207/326 (63.50%), Query Frame = 1
Query: 37 TSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEY--ESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPMRLQTG 1008
TS TG WLLT +L+V G G+ GGD DELR+ ST T F +R HGGSL F +T V SWDT SP +D +GRS+I+ +SE + DETCEG +N GE RMDI SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD NVYG++ +SDIHHM +G+Y+YG Q G W NKMHDN YGFDPHDDSD+LTI G + GIFLHRSSD V N VHD DAG+A++ESF+AD+ +NTF N KYG+R S+G +N +N ++Y Y+Y G+D P + +G
Sbjct: 97 TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSG 421
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 326 bits (835), Expect = 2.960e-104 Identity = 168/323 (52.01%), Postives = 205/323 (63.47%), Query Frame = 1
Query: 46 TGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEY--ESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPMRLQTG 1008
TG WLLT +L+V G GT GGD DELR+ ST T + +R HGGSL F T V SWDT SP +D +GRS+I+ VSE + DETCEG +N GE RMDI SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD NVYG++ +SDIHH+ +G+Y+YG Q G W NKMHDN YGFDPHDDSD+LTI G + GIFLHRSSD V N VHD DAG+A++ESF+AD+ +NTF N KYG+R+S+G +N +N+ SKY YTY GSD P + +G
Sbjct: 104 TGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSG 425 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1077.698.1 >prot_D-herbacea_F_contig1077.698.1 ID=prot_D-herbacea_F_contig1077.698.1|Name=mRNA_D-herbacea_F_contig1077.698.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=378bp MYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHback to top mRNA from alignment at D-herbacea_F_contig1077:21625..24144- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1077.698.1 ID=mRNA_D-herbacea_F_contig1077.698.1|Name=mRNA_D-herbacea_F_contig1077.698.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=2520bp|location=Sequence derived from alignment at D-herbacea_F_contig1077:21625..24144- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1077:21625..24144- >mRNA_D-herbacea_F_contig1077.698.1 ID=mRNA_D-herbacea_F_contig1077.698.1|Name=mRNA_D-herbacea_F_contig1077.698.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2268bp|location=Sequence derived from alignment at D-herbacea_F_contig1077:21625..24144- (Desmarestia herbacea DmunF female)back to top |