mRNA_D-herbacea_F_contig1077.698.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig1077.698.1
Unique NamemRNA_D-herbacea_F_contig1077.698.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 439 bits (1130), Expect = 1.340e-148
Identity = 210/329 (63.83%), Postives = 251/329 (76.29%), Query Frame = 1
Query:    4 LDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP 990
            LDD+ + + +P  ++ KWLLT++L +  G++FYCRG+SIGGDCDELRIQSTG TDFHEVR HGGS+YFE+T+VTSWDTPNK+PQ  Y  GRSF+NCVSE  + E C GQ QN+ GECRMDII SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++  SDIHH YYG YSYG QGGVW NN+MHDNHQYGFDPHDDSDYLT                               +GG  A GIFLHRSSD   V+DNVVHDMQDAGMA++ES +ADI++N F++VK+GIR+SLG   N+V++N+F+  S  GLYTYQGSD P
Sbjct:  111 LDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVY------------DGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEP 427          
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 445 bits (1144), Expect = 4.250e-146
Identity = 207/330 (62.73%), Postives = 246/330 (74.55%), Query Frame = 1
Query:    1 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP 990
            +LDD+   +  P+ +T  WLL ++L++  G +FYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK PQ+ YENGRSF+NCVSE  + + CEG  +N+ GECRMDII SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+  SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLTIA                             +GG+ A GIFLHRSSD   V+DN + +MQDAG+A++ESFDA I+ N     KYGIR+SLG GNN VY N F   S+YGLYTY+GSD P
Sbjct:  473 MLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEP 802          
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 415 bits (1067), Expect = 6.860e-140
Identity = 203/339 (59.88%), Postives = 242/339 (71.39%), Query Frame = 1
Query:    1 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP 990
            +LD +   + +PTSVT KWLL ++L+V  G+IFYC G+  GGDCDELRIQSTG  D++EVRGHGGS+YF +T+VTSWDTPNK PQ+ YE GRSF+NCVSE  + ETC+G  +ND GECRMDII SEMGY+G+FDSESYGLTWKVR         GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYG QGGVWTNN+MHDNHQY            +A                             +GG  AVGIFLHRSSD+ EVY N + +M DAG+A++ESF+ADIHDN    V++GIR+SLG G N+VYDN F+ CS +GLYTY GSD P
Sbjct:   46 MLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEP 372          
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 7.490e-138
Identity = 196/326 (60.12%), Postives = 234/326 (71.78%), Query Frame = 1
Query:    1 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSK 954
            +LDD+   +  P+ +T  WLL ++L++  G +FYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK PQ+ YE GRSF+NCVSE  + + CEG  +N+ GECRMDII SE+ YLG+FDSESYG+TWK        VRGFC D SNPEVFD TNVYGD+  SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLT                               +GG+ AVGIFLHRSSD   V+DN + +MQDAG+A++E+FDA I+ NT    KYGIR+SLG GNN VY N F   S+
Sbjct:   22 MLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVR------------DGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335          
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 1.600e-131
Identity = 189/331 (57.10%), Postives = 231/331 (69.79%), Query Frame = 1
Query:    1 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEY-ESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP 990
            +LD ND +  + T+ TGKWLLT+DLFV  G+  YCRG  +GG+C ELRI+ST  +DF E+RGHGG+LYFE+T+VTSWD   + PQ+ Y++GRSFI CVSE    ++TC     N+ GECRMDII SEMGYLG+  SE+YG+TWKVRGFC+D SNP+VFD  NVYGD+K SDIHHMYYGMYS+G QGGVWTNN MHDNHQYGFDPHDDSDYL IA                             +GG+ A GIFLHRS D  EVY N + +M DAG+A++E+   DIHDN     ++GIR+ LG  NN V+DNVF      G++TY GSD P
Sbjct:   35 VLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEP 362          
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 3.250e-127
Identity = 191/263 (72.62%), Postives = 220/263 (83.65%), Query Frame = 1
Query:    1 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVY 789
            +LDD+ + + SPTSVT KWLL S+L+V  G+IFYC G+  GGDCDELRIQSTG  D++EVRGHGGS+YF +T+VTSWDTPNK PQ+ YE GRSF+NCVSE  + ETC+G+ +ND GECRMDII SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYG QGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX                +GG +AVGIFLHRSSD+ EVY
Sbjct:    1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVY 263          
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 1.480e-115
Identity = 185/332 (55.72%), Postives = 225/332 (67.77%), Query Frame = 1
Query:    1 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESD--ETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP 990
            +LD ND+++    S TG WLL  D+ V +GS+    G   GGD   LRIQSTGS D++E+RGHGGSL F +T VTSWDT  K    +Y+  RSFI CVSE  +D  +TC+G   N  GECRMDII SEMG +G+  +ESYG++WKVRG+C++  NPEVF+ T V GDI +SDI+ MYYG YS+G  GG+WT NKMHDN QYGFDPHDDSD L IA                             +GG  AVGIFLHRSSD CEV+ N V+DM+DAGMAIMES  A IHDNTFTNVKYGIR+S+G   N V +N F +C +YG+YTYQG+D P
Sbjct:  428 VLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKP 757          
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 346 bits (887), Expect = 1.390e-110
Identity = 179/338 (52.96%), Postives = 229/338 (67.75%), Query Frame = 1
Query:    1 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDET--CEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP 990
            +LD+N+D++    + TG WLL  +L V+ GS     GT+  GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N   ++   +GRSFINCV++++      C+G+   ++GECRMDII S MG +GWFD+ESYGLTWKVRG C          N E+F+  NVYGDI NS+I+ MYYG YSYG QGGVW +N M DN QYGFDPHDDSD LTI+                             +GG  AVGIFLHRSSD  EV+DNVV++MQDAGMA+MES+DA+I+DN+FTN +YGIR+SLG G N + +N+F   ++YGLYTY GSD P
Sbjct:  216 VLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDP 550          
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 1.320e-104
Identity = 167/326 (51.23%), Postives = 207/326 (63.50%), Query Frame = 1
Query:   37 TSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEY--ESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPMRLQTG 1008
            TS TG WLLT +L+V  G      G+  GGD DELR+ ST  T F  +R HGGSL F +T V SWDT   SP +D  +GRS+I+ +SE   + DETCEG  +N  GE RMDI  SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD  NVYG++ +SDIHHM +G+Y+YG Q G W  NKMHDN  YGFDPHDDSD+LTI                               G   + GIFLHRSSD   V  N VHD  DAG+A++ESF+AD+ +NTF N KYG+R S+G  +N   +N     ++Y  Y+Y G+D P  + +G
Sbjct:   97 TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSG 421          
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 326 bits (835), Expect = 2.960e-104
Identity = 168/323 (52.01%), Postives = 205/323 (63.47%), Query Frame = 1
Query:   46 TGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEY--ESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPMRLQTG 1008
            TG WLLT +L+V  G      GT  GGD DELR+ ST  T +  +R HGGSL F  T V SWDT   SP +D  +GRS+I+ VSE   + DETCEG  +N  GE RMDI  SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD  NVYG++ +SDIHH+ +G+Y+YG Q G W  NKMHDN  YGFDPHDDSD+LTI                               G   + GIFLHRSSD   V  N VHD  DAG+A++ESF+AD+ +NTF N KYG+R+S+G  +N   +N+    SKY  YTY GSD P  + +G
Sbjct:  104 TGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSG 425          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1077.698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM4_ECTSI1.340e-14863.83Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D8LC73_ECTSI4.250e-14662.73Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A6H5JGU8_9PHAE6.860e-14059.88MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KWQ2_9PHAE7.490e-13860.12MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FRR8_ECTSI1.600e-13157.10Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FIU4_ECTSI3.250e-12772.62Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF5_9PHAE1.480e-11555.72MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7G8D9_ECTSI1.390e-11052.96Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7G339_ECTSI1.320e-10451.23Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI2.960e-10452.01Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1077contigD-herbacea_F_contig1077:21625..24144 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score446.4
Seed ortholog evalue1.3e-122
Seed eggNOG ortholog2880.D8LC73
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons5
Model size1160
Cds size1134
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1077.698.1prot_D-herbacea_F_contig1077.698.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig1077 21625..24120 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927482.9814248-CDS-D-herbacea_F_contig1077:21624..216841622927482.9814248-CDS-D-herbacea_F_contig1077:21624..21684Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1077 21625..21684 -
1690790194.805755-CDS-D-herbacea_F_contig1077:21624..216841690790194.805755-CDS-D-herbacea_F_contig1077:21624..21684Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1077 21625..21684 -
1622927482.997948-CDS-D-herbacea_F_contig1077:21910..220531622927482.997948-CDS-D-herbacea_F_contig1077:21910..22053Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1077 21911..22053 -
1690790194.8147001-CDS-D-herbacea_F_contig1077:21910..220531690790194.8147001-CDS-D-herbacea_F_contig1077:21910..22053Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1077 21911..22053 -
1622927483.0072505-CDS-D-herbacea_F_contig1077:22266..224311622927483.0072505-CDS-D-herbacea_F_contig1077:22266..22431Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1077 22267..22431 -
1690790194.8247116-CDS-D-herbacea_F_contig1077:22266..224311690790194.8247116-CDS-D-herbacea_F_contig1077:22266..22431Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1077 22267..22431 -
1622927483.0186465-CDS-D-herbacea_F_contig1077:22616..228541622927483.0186465-CDS-D-herbacea_F_contig1077:22616..22854Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1077 22617..22854 -
1690790194.832828-CDS-D-herbacea_F_contig1077:22616..228541690790194.832828-CDS-D-herbacea_F_contig1077:22616..22854Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1077 22617..22854 -
1622927483.0320592-CDS-D-herbacea_F_contig1077:23592..241201622927483.0320592-CDS-D-herbacea_F_contig1077:23592..24120Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1077 23593..24120 -
1690790194.8404994-CDS-D-herbacea_F_contig1077:23592..241201690790194.8404994-CDS-D-herbacea_F_contig1077:23592..24120Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1077 23593..24120 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927483.0479062-UTR-D-herbacea_F_contig1077:24120..241441622927483.0479062-UTR-D-herbacea_F_contig1077:24120..24144Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig1077 24121..24144 -
1690790194.8498828-UTR-D-herbacea_F_contig1077:24120..241441690790194.8498828-UTR-D-herbacea_F_contig1077:24120..24144Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig1077 24121..24144 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig1077.698.1

>prot_D-herbacea_F_contig1077.698.1 ID=prot_D-herbacea_F_contig1077.698.1|Name=mRNA_D-herbacea_F_contig1077.698.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=378bp
MYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFH
EVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCE
GQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFD
TTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSD
YLTIANNEVYDNVNHGIIASKRCNNLKIYDNEVYNGGSQAVGIFLHRSSD
SCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNV
YDNVFDQCSKYGLYTYQGSDAPMRLQTGGLAITASTAIPSPTPGRASRSQ
KRTTLSSPTTPSRGPLFLSSKTLRKWCG
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mRNA from alignment at D-herbacea_F_contig1077:21625..24144-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig1077.698.1 ID=mRNA_D-herbacea_F_contig1077.698.1|Name=mRNA_D-herbacea_F_contig1077.698.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=2520bp|location=Sequence derived from alignment at D-herbacea_F_contig1077:21625..24144- (Desmarestia herbacea DmunF female)
ATTCTCGACGACAACGACGACATCATGTACAGTCCCACTAGCGTGACAGG CAAGTGGCTCCTCACGTCCGACCTGTTCGTCCTCAAAGGATCCATCTTCT ACTGCCGCGGTACCAGCATAGGTGGCGACTGCGACGAACTGCGAATCCAG TCTACCGGCTCCACCGACTTCCACGAGGTGCGCGGTCACGGTGGAAGCCT GTACTTCGAGAACACCCTTGTCACCTCCTGGGATACCCCAAACAAGAGCC CGCAGGACGATTACGAGAACGGCCGCTCGTTCATCAACTGTGTGTCGGAG TATGAATCAGACGAGACGTGTGAGGGCCAACCTCAGAATGACTATGGAGA GTGCCGCATGGATATCATCGGCTCCGAGATGGGCTACCTGGGATGGTTCG ACTCGGAGTCCTACGGTCTAACCTGGAAGGTCCGCGGGTTCTGCGCCGAC AAGAGCAACCCGGAAGTGTTCGACACAACGAACGTGTACGGTGACATCAA GAACTCCGATATACACCACATGTACTACGGCATGTACTCCTACGGCCAAC AGGTACCATGTCGAGATGCAAATGATTACCTGTCGATGTCATATCAGTTA TCTAGGTGGTATACGATACCTCATTTGGCCGTTTAATGCTATCTGCTGCA CGTAACTGAGATCATTTGAGTGTGTGTGTGTGTGTATTTATTAAATTGCA CATAACCGCGCAATCCGGCCCTGTCATCCTAGTCATTCTATGCCACTCGC ACTGATCCTCCCGAGAGGGGATCAATGATACTTATTATGAAAACCTCTGA TCAGACGCGACAAAGGGGACACACTCTTTCTACTTGTACAATTCTTACTT AAGCCCAGAGTACCTTGTGCTCCCCCCTGCTTCCTTGTTACTCTCTACAT TATCTGAGTTGGCAGCTACTGGACCGACCCTTTCTTTTCTACATCTTTTC CTCTTGCCACCGAAGTCTCCCCGTTTTCCCCTTGGCGTCTACAACTATAT AGCGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTATTAAAATG CACATAACCGCGCAATCCGGCCCTGTCATCGTAGTCATTCTATACAACTC GCATTGATCCTCCCGAGGGGGGATCAATGATACATATTACGAAAACCTCT GATGAGACCAAAAGGGGGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT GTGACCCAAACAATCGCGCGTCAATCATGACGATGTACATGCCTCCGACG CGGTCGTATCGTGTCGTCCTTTGTTTTCCCGACGTTGCAGGGTGGTGTGT GGACGAACAACAAGATGCATGACAACCACCAGTACGGGTTCGACCCCCAC GATGACTCCGACTACCTCACCATCGCCAACAATGAGGTCTACGACAACGT GAACCATGGCATCATCGCGTCGAAGCGTTGCAACAACCTCAAGATCTACG ACAACGAGGTCTACAACGGCGGTTCGCAGGCTGTGGGCATCTTTCTCCAC CGCAGCTCTGACAGCTGTGAGGTCTACGGTGAGCCTGGGAATAACCTTTC AGCGTCGAATTAACTGACCAAGGGCGTGGAACTTGAGATGTCTACACTGA ATCGGGGGCCGTTAGGTATATTCCTCCGGCATGACACTGTTTACACCAAA CCTTGTTGATGTATTTTCGTTCGCCTTCCCTCCTGTTTGTGGATCGCCCT AATGGTGGCGTAGACAATGTCGTTCACGACATGCAGGATGCTGGTATGGC CATCATGGAGTCTTTCGACGCCGACATCCACGACAACACCTTCACGAACG TCAAGTACGGCATCCGTATCAGCCTGGGCGGAGGGAACAACAATGTGTAC GACAACGTGTTCGACCAATGTTCAAAGTGTGAGTACTCATCTACAGTTTA TGGTAACGTTGTTTGCCGTCGTGAACGAAATCATGCCAAATGCACGATAA ATTGCCACGAATAACGAATCCTTCATTTGCGAAGAACGTGCGTGAACTGC CAGTCGCTTCCAACCTCAGAACAACTCATAATATGTCTGTTTCCCGTCTC CCTTTGTGCACGTATCGTACTCCGCTCGGTTCTACTCGCAGACGGTCTGT ACACTTACCAGGGCTCCGACGCCCCGATGCGTCTTCAGACGGGCGGCCTA GCGATAACAGCTTCTACGGCAATACCATCTCCAACACCGGGACGGGCGTC AAGATCGCAGAAGCGGACGACACTGTCATCACCGGTGAGACTACCTGGAG TGCGGTGGAACGAATATTACTTCTTATCCAGTAGCGTATCTGATAGTTTT CGACCAGGAACATCCGTCGATTACGAACGTTTCTGCTATATGTCTTGGGA TTGCGTCGTTTAAATGTGGTGAGGACATTTTGTTCTCAGCGATTATCACC TGCCCCCACCTCTGTCGCTACTGGGCTCTGGCGCTGCCCTTCCTGCCTTG TCCCGAGCAGACAACACCTTCACGGGGACCTCTCTTCTTGAGTTCAAAGA CGCTCAGGAAATGGTGTGGT
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Coding sequence (CDS) from alignment at D-herbacea_F_contig1077:21625..24144-

>mRNA_D-herbacea_F_contig1077.698.1 ID=mRNA_D-herbacea_F_contig1077.698.1|Name=mRNA_D-herbacea_F_contig1077.698.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2268bp|location=Sequence derived from alignment at D-herbacea_F_contig1077:21625..24144- (Desmarestia herbacea DmunF female)
ATGTACAGTCCCACTAGCGTGACAGGCAAGTGGCTCCTCACGTCCGACCT
GTTCGTCCTCAAAGGATCCATCTTCTACTGCCGCGGTACCAGCATAGGTG
GCGACTGCGACGAACTGCGAATCCAGTCTACCGGCTCCACCGACTTCCAC
GAGGTGCGCGGTCACGGTGGAAGCCTGTACTTCGAGAACACCCTTGTCAC
CTCCTGGGATACCCCAAACAAGAGCCCGCAGGACGATTACGAGAACGGCC
GCTCGTTCATCAACTGTGTGTCGGAGTATGAATCAGACGAGACGTGTGAG
GGCCAACCTCAGAATGACTATGGAGAGTGCCGCATGGATATCATCGGCTC
CGAGATGGGCTACCTGGGATGGTTCGACTCGGAGTCCTACGGTCTAACCT
GGAAGGTCCGCGGGTTCTGCGCCGACAAGAGCAACCCGGAAGTGTTCGAC
ACAACGAACGTGTACGGTGACATCAAGAACTCCGATATACACCACATGTA
CTACGGCATGTACTCCTACGGCCAACAGATGTACAGTCCCACTAGCGTGA
CAGGCAAGTGGCTCCTCACGTCCGACCTGTTCGTCCTCAAAGGATCCATC
TTCTACTGCCGCGGTACCAGCATAGGTGGCGACTGCGACGAACTGCGAAT
CCAGTCTACCGGCTCCACCGACTTCCACGAGGTGCGCGGTCACGGTGGAA
GCCTGTACTTCGAGAACACCCTTGTCACCTCCTGGGATACCCCAAACAAG
AGCCCGCAGGACGATTACGAGAACGGCCGCTCGTTCATCAACTGTGTGTC
GGAGTATGAATCAGACGAGACGTGTGAGGGCCAACCTCAGAATGACTATG
GAGAGTGCCGCATGGATATCATCGGCTCCGAGATGGGCTACCTGGGATGG
TTCGACTCGGAGTCCTACGGTCTAACCTGGAAGGTCCGCGGGTTCTGCGC
CGACAAGAGCAACCCGGAAGTGTTCGACACAACGAACGTGTACGGTGACA
TCAAGAACTCCGATATACACCACATGTACTACGGCATGTACTCCTACGGC
CAACAGGGTGGTGTGTGGACGAACAACAAGATGCATGACAACCACCAGTA
CGGGTTCGACCCCCACGATGACTCCGACTACCTCACCATCGCCAACAATG
AGGTCTACGACAACGTGAACCATGGCATCATCGCGTCGAAGCGTTGCAAC
AACCTCAAGATCTACGACAACGAGGTCTACAACGGCGGTTCGCAGGCTGT
GGGCATCTTTCTCCACCGCAGCTCTGACAGCTGTGAGGTCTACGGGTGGT
GTGTGGACGAACAACAAGATGCATGACAACCACCAGTACGGGTTCGACCC
CCACGATGACTCCGACTACCTCACCATCGCCAACAATGAGGTCTACGACA
ACGTGAACCATGGCATCATCGCGTCGAAGCGTTGCAACAACCTCAAGATC
TACGACAACGAGGTCTACAACGGCGGTTCGCAGGCTGTGGGCATCTTTCT
CCACCGCAGCTCTGACAGCTGTGAGGTCTACGACAATGTCGTTCACGACA
TGCAGGATGCTGGTATGGCCATCATGGAGTCTTTCGACGCCGACATCCAC
GACAACACCTTCACGAACGTCAAGTACGGCATCCGTATCAGCCTGGGCGG
AGGGAACAACAATGTGTACGACAACGTGTTCGACCAATGTTCAAAGTACA
ATGTCGTTCACGACATGCAGGATGCTGGTATGGCCATCATGGAGTCTTTC
GACGCCGACATCCACGACAACACCTTCACGAACGTCAAGTACGGCATCCG
TATCAGCCTGGGCGGAGGGAACAACAATGTGTACGACAACGTGTTCGACC
AATGTTCAAAGTACGGTCTGTACACTTACCAGGGCTCCGACGCCCCGATG
CGTCTTCAGACGGGCGGCCTAGCGATAACAGCTTCTACGGCAATACCATC
TCCAACACCGGGACGGGCGTCAAGATCGCAGAAGCGGACGACACTGTCAT
CACCGACGGTCTGTACACTTACCAGGGCTCCGACGCCCCGATGCGTCTTC
AGACGGGCGGCCTAGCGATAACAGCTTCTACGGCAATACCATCTCCAACA
CCGGGACGGGCGTCAAGATCGCAGAAGCGGACGACACTGTCATCACCGAC
AACACCTTCACGGGGACCTCTCTTCTTGAGTTCAAAGACGCTCAGGAAAT
GGTGTGGTACAACACCTTCACGGGGACCTCTCTTCTTGAGTTCAAAGACG
CTCAGGAAATGGTGTGGT
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