mRNA_D-herbacea_F_contig106.637.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig106.637.1 vs. uniprot
Match: D8LB51_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB51_ECTSI) HSP 1 Score: 325 bits (833), Expect = 7.480e-91 Identity = 547/790 (69.24%), Postives = 591/790 (74.81%), Query Frame = 1
Query: 346 WGRLDPETVARGKVLAGRIKELGYARDWQGMLQALEEGPKNAIVCTIAVNQLGRMGKWREAVELLDGMGKGGDGSDRPDAFVYAAAITACGKAGRPVEAVALLTEMPSRRVEPDVVCFGAAISALGEVAAGQSTSTWGVKPESTYKNASDGDDGG---VAGGTKAIVPTRAHEKAVALIQQMRRDGPSPNQQCFASAITACARALDPRAALEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGMENAYGIKPSTITYNSAISALSRAGRARDARALLDEMSERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVTKRRVEYIRDKVSGNGNSQKTKPRPRKTPATTTVSSRDLEALSETEPSLSSGGAMAAKTTTTKKVSRGAIHGSKRGGRGAMEEDNEGEGEEEAGADFLAELRDRFAPSDDELASEEDLALAEDGILFGEEKDEVKVEVEVEEMAGTAPVVVGGGRGDSDLELDASDISRSEAKMPPAVVVVGEREGELTTGDGEATGVTPSTSVTLLLEDVKTMKATELKAELRGRGLRLSGNKAELAARLEEALQETAA 2706
WGRLDP+TV +GK+LA RIKEL ARD++GML+ALEEGPKNAIVCT+A+ LG+ GKWREAVE+LDGMGKGGDGSDRPDAF YAA I ACGKAGRPVEAVALLTEMP+RRV+PDVVCFG+AI ALGEVA Q+ STWG K A +G +GG +A PTRAHEKA+ LIQ+MRR+GPSPN QC+ASAITACARA DPR+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GME AYG+K LSRAGRAR+A+ALL+EMSER XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PVTKRRVEYI+ K+SG G + R D + E T + V + AGADFL ELR RFA +ELAS+ DL L D +L +V+ E A T V V G GDS + D SE A V E E GD G + L+LE K MK T+LK EL+GRGLR+SGNKAEL ARLEEALQ+ AA
Sbjct: 178 WGRLDPQTVEKGKMLAARIKELAKARDFEGMLEALEEGPKNAIVCTVAITCLGQAGKWREAVEVLDGMGKGGDGSDRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKPDVVCFGSAIFALGEVAGTQNRSTWG------RKGADEGGEGGDKPIASAVADPKPTRAHEKALELIQEMRREGPSPNSQCYASAITACARAHDPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGMEKAYGVKXXXXXXXXXXXGLSRAGRAREAKALLNEMSERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLPVTKRRVEYIQAKISGGGGGRSXXXR-----------KNDRSRVQE--------------RTKAEDVVATTLR---------------------AGADFLEELRQRFAVETEELASDSDLDLLADDVLLAGAISSGEVKTNGEAGAATTSVDVTGAVGDSPVSGVDGDDRTSEDGRSEADETVAEIADEAVRGDISEQGEEDTNKAQLVLEGFKAMKVTDLKVELKGRGLRVSGNKAELLARLEEALQQPAA 915
BLAST of mRNA_D-herbacea_F_contig106.637.1 vs. uniprot
Match: A0A6H5KL58_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL58_9PHAE) HSP 1 Score: 285 bits (729), Expect = 4.880e-78 Identity = 539/787 (68.49%), Postives = 582/787 (73.95%), Query Frame = 1
Query: 385 VLAGRIKELGYARDWQGMLQALEEGPKNAIVCTIAVNQLGRMGKWREAVELLDGMGKGGDGSDRPDAFVYAAAITACGKAGRPVEAVALLTEMPSRRVEPDVVCFGAAISALGEVAAGQSTSTWGVKPESTYKNASDGD-------DGGVAGGTKAIVPTRAHEKAVALIQQMRRDGPSPNQQCFASAITACARALDPRAALEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGMENAYGIKPSTITYNSAISALSRAGRARDARALLDEMSERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVTKRRVEYIRDKVSGNGNSQKTKPRPRKTPATTTVSSRDLEALSETEPSLSSGGAMAAKTTTTKKVSRGA------IHGSKRGGRGAMEEDNEGEGEEEAGADFLAELRDRFAPSDDELASEEDLALAEDGILFGEEKDEVKVEVEVEEMAGTAPVVVGGGRGDSDLELDASDISRSEAKMPPAVVVVGEREGELTTGDGEATGVTPSTSVTLLLEDVKTMKATELKAELRGRGLRLSGNKAELAARLEEALQETAA 2706
+LA RIKEL ARD++GML+ALEEGPKNAIVCT+A+ LG+ GKWREAVE+LDGMGKGG SDRPDAF YAA I ACGKAGRPVEAVALLTEMP+RRV+PDVVCFG+AI ALGEVA Q+ STWG K A++G D +A PTRAHEKA+ LIQ MRR+GPSPN QC+ASAITACARA DPR+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GME AYG+K IS LSRAGRAR+A+ALL+EMSER XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PVTKRRVEYI+ K+SG G ++ + D+ + K G G+ D GEEEAGADFL ELR RFA +ELAS+ DL L D +L +VE E A T V V G GDS + D E A V E E D G + L+LE KTMK T+LK EL+GRGLR+SGNKAEL ARLE+ALQ+ AA
Sbjct: 1 MLAARIKELAKARDFEGMLEALEEGPKNAIVCTVAITCLGQAGKWREAVEVLDGMGKGG--SDRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKPDVVCFGSAIFALGEVAGTQNRSTWG------RKGANEGGXXXXXXXDMPMAAAVAGPKPTRAHEKALELIQDMRREGPSPNSQCYASAITACARAHDPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGMEKAYGVKXXXXXXXXXISGLSRAGRAREAKALLNEMSERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLPVTKRRVEYIQAKISGGGGRXXXXXXXXRSRVKERTKAEDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQGKSGKGGSQAAD----GEEEAGADFLEELRQRFAVETEELASDSDLDLLADDVLLAGANSYGEVETNGEAGAVTTSVHVTGAVGDSPVSGADGDDRMPEDGRSEADETVAEIADEAVRSDISGQGE-DTNKAQLVLEGFKTMKVTDLKVELKGRGLRVSGNKAELLARLEKALQQPAA 774
BLAST of mRNA_D-herbacea_F_contig106.637.1 vs. uniprot
Match: A0A0M0JSH9_9EUKA (Macrocin-o-methyltransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JSH9_9EUKA) HSP 1 Score: 64.7 bits (156), Expect = 1.230e-6 Identity = 52/172 (30.23%), Postives = 77/172 (44.77%), Query Frame = 1
Query: 433 GMLQALEEGPKNAIVCTIAVNQLGRMGKWREAVELLDGMGKGGDGSDRPDAFVYAAAITACGKAGRPVEAVALLTEMPSRRVEPDVVCFGAAISALGEVAAGQSTSTWGVKPESTYKNASDGDDGGVAGGTKAIVPTRAHEKAVALIQQMRRDGPSPNQQCFASAITACARA 948
G LQ L ++A TIA++ GR+ W++A++LL GMG G P+ + + AA+TAC +AG+ A LL M +V+P+V + I G VA Q + P +E+ L M DG PN + + SAI AC R+
Sbjct: 79 GKLQPL----RSATEYTIAIDACGRVEAWKQALDLLHGMGSADGGGVAPNVYTFTAAMTACTRAGQIEPAYELLASMREAKVKPNVFTY--TILFTGMVAQTQRS------------------------------PGPKYERIDQLWSSMLADGVGPNLRTYRSAILACERS 214 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig106.637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig106.637.1 >prot_D-herbacea_F_contig106.637.1 ID=prot_D-herbacea_F_contig106.637.1|Name=mRNA_D-herbacea_F_contig106.637.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=758bp MLQALEEGPKNAIVCTIAVNQLGRMGKWREAVELLDGMGKGGDGSDRPDAback to top mRNA from alignment at D-herbacea_F_contig106:807473..830942+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig106.637.1 ID=mRNA_D-herbacea_F_contig106.637.1|Name=mRNA_D-herbacea_F_contig106.637.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=23470bp|location=Sequence derived from alignment at D-herbacea_F_contig106:807473..830942+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig106:807473..830942+ >mRNA_D-herbacea_F_contig106.637.1 ID=mRNA_D-herbacea_F_contig106.637.1|Name=mRNA_D-herbacea_F_contig106.637.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=4548bp|location=Sequence derived from alignment at D-herbacea_F_contig106:807473..830942+ (Desmarestia herbacea DmunF female)back to top |