mRNA_D-herbacea_F_contig105.548.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig105.548.1 vs. uniprot
Match: D7G3C3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C3_ECTSI) HSP 1 Score: 261 bits (666), Expect = 2.950e-78 Identity = 200/476 (42.02%), Postives = 234/476 (49.16%), Query Frame = 1
Query: 106 VGFMFDSALPKTTRLFHFGDYSVMVRLVDDDPGAVQSGHYVWPAAPALASYLVDQRRSLPPG-TVVELGAGCGLAGLVAAQLPRTTAVVFTDHDPAGVLDMIRESVAEQSQNPELGGAEAAAKSRCVALPWGPIGIVPSFSMSHPSIFLISSSSTSSIP------FLIVQFTFSHYVNSTLF----GLATRAHVYK-RHQAALGEALASVSPPXXXXXXXAGSKGNLGFDLVIASDVVYSVSVVKPLFDAVHDLLSEG----NSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEVGGEGISVATEASEATRPDRDAGVGLPLPRDGAFTDDADNSRAGTTDLRSAPGSTVGDPPVFIMSQSFGYDSETERAIDCACLQRGLVREVVWDELGIAPAPGHQSQQVKFPAAEQNLGR--------------ESEGVVEAGGGSCFDGLPLSRRWQAGTKLQLFWRA 1443
VGFMFD+ALPKT R F FGD SV VRLVDDDPGAVQSGHYVWPAAPAL++YLVD+R +LP G +ELGAGCGLAGLVAAQLP T AVVFTDHDP GVLDMIRES+ EQ Q PELGG+ AAAKSRCV L WG +G S++H +SS + SS P L+ + V + G + A + + R A G XXXXXX G G + FDLVIASDV+YSVSVV+PLF V +LL S GG+G E V + P PVF+MSQSFGYD ETE+ I+ AC+++GLVREVVWDEL +AP E L +SR +AGTKLQ FWRA
Sbjct: 6 VGFMFDNALPKTRRSFRFGDISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTKAVVFTDHDP-GVLDMIRESIEEQQQQPELGGSAAAAKSRCVQLSWGTVGNAQRASLAHA----LSSVAASSTPRPRRDEALVRTRNLAEEVGGSTSRSGPGRGSGAGLSRGRIDGARGXXXXXXXXXXXXXXXSGG--GGVLFDLVIASDVIYSVSVVEPLFLTVGELLRPRCCPCPSREKRGEVFCAEGAVETGAGEARPPREPAPGKGEEAVERRQAAGTGGDGSGSIVPEEE---------VPVLSPXXXXXXXXXXXXXXXXXXXXXXXXXXADGTPVFLMSQSFGYDPETEKTIERACVEQGLVREVVWDELHLAPTTPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEHPSPXXXXXXXXXXLLVVSRPLRAGTKLQRFWRA 465
BLAST of mRNA_D-herbacea_F_contig105.548.1 vs. uniprot
Match: A0A6H5KXF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXF9_9PHAE) HSP 1 Score: 246 bits (628), Expect = 7.310e-73 Identity = 195/399 (48.87%), Postives = 228/399 (57.14%), Query Frame = 1
Query: 115 MFDSALPKTTRLFHFGDYSVMVRLVDDDPGAVQSGHYVWPAAPALASYLVDQRRSLPPG-TVVELGAGCGLAGLVAAQLPRTTAVVFTDHDPAGVLDMIRESVAEQSQNPELGGAEAAAKSRCVALPWGPIGIVPSFSMSHPSIFLISSSSTSSIP------FLIVQFTFSHYVNSTLFGLATRAH----VYKRHQAALGEALASVSPPXXXXXXXAGSKGNLGFDLVIASDVVYSVSVVKPLFDAVHDLLSEGNSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEVGGEGISVATEASEATRPDRDAGVGLPLPRDGAFTDDADNSRAGTTDLRSAPGSTVGDPPVFIMSQSFGYDSETERAIDCACLQRGLVREVVWDELGIAP 1278
MFD+ALPKT R F FGD SV VRLVDDDPGAVQSGHYVWPAAPAL++YLVD+R +LP G +ELGAGCGLAGLVAAQLP TTAVVFTDHDP GVLDMIRES+ EQ Q PELGG+ AAAKSRCV L WG +G S+++ +SS + SS P L+ + V + G A + +R + XXXXXXX + FDLVIASDV+YSVSVV+PLF V +LL XXXXXXXXXXXXXXXXXX ADN+ PVF+MSQSFGYD+ETE++I+ ACL++GLVREVVWDEL +AP
Sbjct: 1 MFDNALPKTRRSFRFGDISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTTAVVFTDHDP-GVLDMIRESIEEQQQQPELGGSAAAAKSRCVQLSWGSVGNAQRASLANA----LSSVAASSPPRPSRDEALVRTRNLAEEVGGSTSGGAPXXXSGDGLSRRRVDGERSDRSDXXXXXXXXXXXXXXXXGVLFDLVIASDVIYSVSVVEPLFLTVGELLRRRCCSFSSREKPGEEARPPREPEPGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADNT------------------PVFLMSQSFGYDAETEKSIERACLEQGLVREVVWDELHLAP 376
BLAST of mRNA_D-herbacea_F_contig105.548.1 vs. uniprot
Match: A0A836CF84_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF84_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.640e-38 Identity = 74/136 (54.41%), Postives = 98/136 (72.06%), Query Frame = 1
Query: 97 FGDVGFMFDSALPKTTRLFHFGDYSVMVRLVDDDPGAVQSGHYVWPAAPALASYLVDQRRSLPPGTVVELGAGCGLAGLVAAQLPRTTAVVFTDHDPAGVLDMIRESVAEQSQNPELGGAEAAAKSRCVALPWGPI 504
+ ++GFMFD+ LP+T R F FG S ++ VDD+PGAVQSGHY+WPA+P LASYLV+QR S+P G+V+ELGAGCGLAGL AAQL +AVVFTDHD GV+++++E++ Q AA+S L WG +
Sbjct: 2 YAELGFMFDTGLPRTQRTFTFGPISTTLQFVDDEPGAVQSGHYLWPASPCLASYLVEQRESIPAGSVLELGAGCGLAGLTAAQLTGVSAVVFTDHD-FGVIELLQENIEHLRQAGSAKAGVLAAQS----LSWGEV 132
BLAST of mRNA_D-herbacea_F_contig105.548.1 vs. uniprot
Match: A0A1W0A5U5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5U5_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.390e-34 Identity = 76/146 (52.05%), Postives = 93/146 (63.70%), Query Frame = 1
Query: 70 LDDGSADDCFGDVGFMFDSALPKTTRLFHFGDYSVMVRLVDDDPGAVQSGHYVWPAAPALASYLVDQRRSLPPGTVVELGAGCGLAGLVAAQLPRTTAVVFTDHDPAGVLDMIRESVAEQSQNPELGGAEAAAKSRCVALPWGPIG 507
+ DGS D+ DVGFMFD + K T F +G SV++ V+D+PG VQSGHYVWPAAPAL Y+ SLP G VVELGAGCGLAGLV AQL ++ ++FTDHDP GVL I +V QS + AK +L WG +G
Sbjct: 21 MSDGSDDELLTDVGFMFDDRMEKVTCEFKYGRVSVLLSYVEDNPGFVQSGHYVWPAAPALCEYMEANFASLPRGHVVELGAGCGLAGLVFAQLDPSSQIIFTDHDP-GVLKTIEHNVKMQSHREQ-------AKCYTQSLRWGSVG 158
BLAST of mRNA_D-herbacea_F_contig105.548.1 vs. uniprot
Match: A0A067D2D9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D2D9_SAPPC) HSP 1 Score: 136 bits (343), Expect = 2.350e-33 Identity = 78/153 (50.98%), Postives = 91/153 (59.48%), Query Frame = 1
Query: 70 LDDGSADDCFGDVGFMFDSALPKTTRLFHFGD-------YSVMVRLVDDDPGAVQSGHYVWPAAPALASYLVDQRRSLPPGTVVELGAGCGLAGLVAAQLPRTTAVVFTDHDPAGVLDMIRESVAEQSQNPELGGAEAAAKSRCVALPWGPIG 507
+ DGS +D DVGFMFD L K T F +G SVM+ V D+PG VQSGHYVWPAAPAL Y+V SLP G V+ELGAGCGLAGLV AQL + ++FTDHDP GVL I +V Q+ A A +L WGP G
Sbjct: 24 MSDGSDEDLLTDVGFMFDDCLEKVTCEFTYGTSSSGAPRVSVMLSYVQDNPGFVQSGHYVWPAAPALCEYMVSNFESLPRGNVLELGAGCGLAGLVFAQLDPASRIIFTDHDP-GVLKTIEHNVTMQTHR-------AQATCHTQSLRWGPEG 168
BLAST of mRNA_D-herbacea_F_contig105.548.1 vs. uniprot
Match: W4G5T8_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G5T8_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.390e-32 Identity = 78/183 (42.62%), Postives = 105/183 (57.38%), Query Frame = 1
Query: 1 GLRSCVQREL-----LLERSDTMAEAGQLDDGSADDCFGDVGFMFDSALPKTTRLFHFG---------DYSVMVRLVDDDPGAVQSGHYVWPAAPALASYLVDQRRSLPPGTVVELGAGCGLAGLVAAQLPRTTAVVFTDHDPAGVLDMIRESVAEQSQNPELGGAEAAAKSRCVALPWGPIG 507
+++ ++RE+ L+ S + + + + +D DVGFM+D L K T F +G SV + V DDPG VQSGHYVWPAAPAL Y+V + LP G +VELGAGCGLAGLV AQL ++ ++FTDHDP GVL I +V +QS P+ A+ +L WGP G
Sbjct: 6 NMQAALEREMEIIQHKLDISSLLYDDNREGSDADEDLLADVGFMYDDCLEKVTCEFTYGVTSDTDPTPRVSVFLSYVQDDPGFVQSGHYVWPAAPALCEYMVAHFKELPRGNIVELGAGCGLAGLVFAQLDPSSTIIFTDHDP-GVLKTIEHNVTKQSHRPKQ------ARCHTQSLRWGPQG 181
BLAST of mRNA_D-herbacea_F_contig105.548.1 vs. uniprot
Match: A0A024UA67_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UA67_9STRA) HSP 1 Score: 134 bits (336), Expect = 3.790e-32 Identity = 80/155 (51.61%), Postives = 93/155 (60.00%), Query Frame = 1
Query: 73 DDGSAD-DCFGDVGFMFDSALPKTTRLFHFG---------DYSVMVRLVDDDPGAVQSGHYVWPAAPALASYLVDQRRSLPPGTVVELGAGCGLAGLVAAQLPRTTAVVFTDHDPAGVLDMIRESVAEQSQNPELGGAEAAAKSRCVALPWGPIG 507
DD AD D DVGFM+D L K T F FG SV + V DDPG VQSGHYVWPAAPAL Y+ + LP G VVELGAGCGLAGLV AQL ++ ++FTDHDP GVL I +V +QS P AA ++ +L WGP G
Sbjct: 31 DDQEADEDLLADVGFMYDDCLEKVTCEFTFGVTSDSDPTPRVSVFLSYVQDDPGFVQSGHYVWPAAPALCEYMEAHFKELPRGNVVELGAGCGLAGLVFAQLDPSSTIIFTDHDP-GVLKTIEHNVTKQSHRP----VHAACHTQ--SLRWGPQG 178
BLAST of mRNA_D-herbacea_F_contig105.548.1 vs. uniprot
Match: A0A0N7L4X4_PLAHL (Predicted methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4X4_PLAHL) HSP 1 Score: 132 bits (333), Expect = 4.140e-32 Identity = 73/154 (47.40%), Postives = 96/154 (62.34%), Query Frame = 1
Query: 58 EAGQLDDGSADDCFGDVGFMFDSALPKTTRLFHFG---DYSVMVRLVDDDPGAVQSGHYVWPAAPALASYLVDQRRSLPPGTVVELGAGCGLAGLVAAQLPRTTAVVFTDHDPAGVLDMIRESVAEQSQNPELGGAEAAAKSRCVALPWGPIGI 510
E +++DG+ + DVGFMFD+ L K T ++FG D SV++ ++PGA+QSGHYVWPAAPAL YL R ++P G +VELGAGCGL GL AQL V+FTDHDP GVL +I + ++Q + A A +L WGP GI
Sbjct: 2 ETIEMEDGT-EGMLTDVGFMFDAFLEKVTCSYNFGANADVSVLLTYAKEEPGALQSGHYVWPAAPALCEYLTKHRDAIPSGNIVELGAGCGLTGLTVAQLRPDATVIFTDHDP-GVLKVISHNASQQKR--------AQATCHTKSLRWGPDGI 145
BLAST of mRNA_D-herbacea_F_contig105.548.1 vs. uniprot
Match: A0A1V9YXF1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YXF1_9STRA) HSP 1 Score: 132 bits (332), Expect = 7.220e-32 Identity = 75/147 (51.02%), Postives = 89/147 (60.54%), Query Frame = 1
Query: 70 LDDGSADDCFGDVGFMFDSALPKTTRLFHFGD-YSVMVRLVDDDPGAVQSGHYVWPAAPALASYLVDQRRSLPPGTVVELGAGCGLAGLVAAQLPRTTAVVFTDHDPAGVLDMIRESVAEQSQNPELGGAEAAAKSRCVALPWGPIG 507
L +GS ++ DVGFMFD L K T F +G VM+ V D+PG VQSGHYVWPAAPAL Y+ SLP G V+ELGAGCGLAGLV AQL T+ ++FTDHDP GVL I +V Q + A +L WGP G
Sbjct: 23 LSEGSDEELLTDVGFMFDDCLEKVTCEFTYGSRVRVMLSYVQDNPGFVQSGHYVWPAAPALCEYMEANLASLPKGNVIELGAGCGLAGLVFAQLDPTSRIIFTDHDP-GVLKTIEHNVTMQVHREQ-------AVCHTQSLRWGPEG 161
BLAST of mRNA_D-herbacea_F_contig105.548.1 vs. uniprot
Match: H3GJQ4_PHYRM (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=H3GJQ4_PHYRM) HSP 1 Score: 130 bits (328), Expect = 2.120e-31 Identity = 72/155 (46.45%), Postives = 96/155 (61.94%), Query Frame = 1
Query: 58 EAGQLDDGSADDCFGDVGFMFDSALPKTTRLFHFG---DYSVMVRLVDDDPGAVQSGHYVWPAAPALASYLVDQRRSLPPGTVVELGAGCGLAGLVAAQLPRTTAVVFTDHDPAGVLDMIRESVAEQSQNPELGGAEAAAKSRCV--ALPWGPIG 507
E +++DG+ + DVGFMFD+ L K T + +G D SV++ ++PGA+QSGHYVWPAAPAL YL R ++P G VVELGAGCGL GL AQL V+FTDHDP GVL +I + +Q + A++ C+ +L WGP G
Sbjct: 2 ETMEMEDGT-EGMLTDVGFMFDACLEKVTCRYEYGANADVSVLLTYAKEEPGALQSGHYVWPAAPALCEYLTTHRDAIPRGNVVELGAGCGLTGLAVAQLRPEATVIFTDHDP-GVLKVIEHNAGQQER----------AQATCITQSLRWGPDG 144 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig105.548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig105.548.1 >prot_D-herbacea_F_contig105.548.1 ID=prot_D-herbacea_F_contig105.548.1|Name=mRNA_D-herbacea_F_contig105.548.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=482bp GLRSCVQRELLLERSDTMAEAGQLDDGSADDCFGDVGFMFDSALPKTTRLback to top mRNA from alignment at D-herbacea_F_contig105:554346..563275+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig105.548.1 ID=mRNA_D-herbacea_F_contig105.548.1|Name=mRNA_D-herbacea_F_contig105.548.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=8930bp|location=Sequence derived from alignment at D-herbacea_F_contig105:554346..563275+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig105:554346..563275+ >mRNA_D-herbacea_F_contig105.548.1 ID=mRNA_D-herbacea_F_contig105.548.1|Name=mRNA_D-herbacea_F_contig105.548.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2892bp|location=Sequence derived from alignment at D-herbacea_F_contig105:554346..563275+ (Desmarestia herbacea DmunF female)back to top |