prot_D-herbacea_M_contig96.16049.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_M_contig96.16049.1
Unique Nameprot_D-herbacea_M_contig96.16049.1
Typepolypeptide
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length218
Homology
BLAST of mRNA_D-herbacea_M_contig96.16049.1 vs. uniprot
Match: A0A6H5JWZ4_9PHAE (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ4_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 2.680e-42
Identity = 79/99 (79.80%), Postives = 88/99 (88.89%), Query Frame = 0
Query:  122 KEGSSRP---KRPREKDLPVGLPKSMVRRIMKLGEDTRNVSNEALVVVVKASELFLEKFAARAFGHAEKLGRRTIKYQDVSDVRVNDANLLFLEAVVPP 217
            KEG S+P   KRPR+  LPVGLP SMVRRIMKLGE+TRN+S EALV+VVKASE+FLEKFAARAF HAEKLGR+TIKY+DVSDVR+ D NLLFLEAVVPP
Sbjct:  115 KEGGSQPRSAKRPRDTPLPVGLPPSMVRRIMKLGEETRNISKEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVRLEDPNLLFLEAVVPP 213          
BLAST of mRNA_D-herbacea_M_contig96.16049.1 vs. uniprot
Match: D8LBX1_ECTSI (Histone-like transcription factor family (CBF/NF-Y) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX1_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 2.400e-41
Identity = 78/99 (78.79%), Postives = 87/99 (87.88%), Query Frame = 0
Query:  122 KEGSSRP---KRPREKDLPVGLPKSMVRRIMKLGEDTRNVSNEALVVVVKASELFLEKFAARAFGHAEKLGRRTIKYQDVSDVRVNDANLLFLEAVVPP 217
            KEG S+P   KRPR+  LPVGLP SMV+RIMKLGE+TRN+S EALV+VVKASE+FLEK AARAF HAEKLGR+TIKY+DVSDVRV D NLLFLEAVVPP
Sbjct:  119 KEGGSQPRSAKRPRDTPLPVGLPPSMVKRIMKLGEETRNISKEALVIVVKASEIFLEKLAARAFDHAEKLGRKTIKYRDVSDVRVEDPNLLFLEAVVPP 217          
BLAST of mRNA_D-herbacea_M_contig96.16049.1 vs. uniprot
Match: A0A7S2G0X5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G0X5_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.280e-15
Identity = 38/79 (48.10%), Postives = 58/79 (73.42%), Query Frame = 0
Query:  138 VGLPKSMVRRIMKLGEDTRNVSNEALVVVVKASELFLEKFAARAFGHAEKLGRRTIKYQDVSDVRVNDANLLFLEAVVP 216
            + +PK+ V+RIMKL +D + V  EA+++V KA+ELFLE FA  +  HA K+ R+ IKY+D+ + RV D+NL FL+ ++P
Sbjct:   51 LAIPKNAVKRIMKLEDDVKQVQAEAVLLVAKATELFLESFALDSHKHAVKMERKQIKYEDLLETRVADSNLEFLKHIIP 129          
BLAST of mRNA_D-herbacea_M_contig96.16049.1 vs. uniprot
Match: F0Y9H8_AURAN (CBFD_NFYB_HMF domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9H8_AURAN)

HSP 1 Score: 74.3 bits (181), Expect = 4.940e-14
Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 0
Query:  140 LPKSMVRRIMKLGEDTRNVSNEALVVVVKASELFLEKFAARAFGHAEKLGRRTIKYQDVSDVRVNDANLLFLEAVVP 216
            +PK+ V+RIMKL  +   V+N+A+++V KA+E+FLEKF+A A   A    R T+KY+D++D    D N  FL  V+P
Sbjct:    4 IPKAAVKRIMKLDPEVNQVANDAVILVAKATEMFLEKFSAEARAQATLRSRTTVKYEDIADTVSGDKNYEFLATVIP 80          
BLAST of mRNA_D-herbacea_M_contig96.16049.1 vs. uniprot
Match: W7TNB3_9STRA (Histone-like transcription factor family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNB3_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.950e-13
Identity = 34/82 (41.46%), Postives = 57/82 (69.51%), Query Frame = 0
Query:  135 DLPVGLPKSMVRRIMKLGEDTRNVSNEALVVVVKASELFLEKFAARAFGHAEKLGRRTIKYQDVSDVRVNDANLLFLEAVVP 216
            D  + +P++ ++RIMKL  DT+ +S +A++V+ KA+ELF++K A  +   A    R+TIKY+D++D R +  N+ FL+ VVP
Sbjct:  115 DTTLAIPRASIKRIMKLDPDTKQLSQDAIMVMAKATELFIDKLAKASHSMAVTNKRKTIKYEDIADARFSQKNMEFLDGVVP 196          
BLAST of mRNA_D-herbacea_M_contig96.16049.1 vs. uniprot
Match: A0A7S2RT01_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT01_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 4.820e-13
Identity = 36/80 (45.00%), Postives = 57/80 (71.25%), Query Frame = 0
Query:  138 VGLPKSMVRRIMKLGEDTRNVSNEALVVVVKASELFLEKFAARAFGHAEKLGRRTIKYQDVSDVRVNDANLL-FLEAVVP 216
            V +P++ V+RIMKL ED + V  EA+++V KA+ELFLEKFA  +   +++  R+ +KY+D+ + R+ND N L FL  ++P
Sbjct:   74 VAIPRNAVKRIMKLQEDVKQVQAEAVLLVAKATELFLEKFAKDSHATSQRAERKQLKYEDLLETRLNDENTLAFLTHIIP 153          
BLAST of mRNA_D-herbacea_M_contig96.16049.1 vs. uniprot
Match: A0A7S2UXP1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP1_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.730e-12
Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 0
Query:  140 LPKSMVRRIMKLGEDTRNVSNEALVVVVKASELFLEKFAARAFGHAEKLGRRTIKYQDVSDVRVNDANLLFLEAVVP 216
            LPK+ VRRIMKL ++T+ V+ EA+ +  KA+E+ +EK A  +F  A+  G R I+Y+DV+  R+ D NL FL+ V+P
Sbjct:   65 LPKNAVRRIMKLDQETKTVTQEAVYLAGKATEILVEKLARDSFEQAKTRGGRMIRYEDVAKARIADPNLDFLKDVMP 141          
BLAST of mRNA_D-herbacea_M_contig96.16049.1 vs. uniprot
Match: A0A7S3JZM4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZM4_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 8.700e-12
Identity = 33/81 (40.74%), Postives = 52/81 (64.20%), Query Frame = 0
Query:  137 PVGLPKSMVRRIMKLGEDTRNVSNEALVVVVKASELFLEKFAARAFGHAEKLGRRTIKYQDVSDVRVNDANLLFLEAVVPP 217
            P+ +PK  ++RIMK+  D   V+N+A+++V KA+ELF+EK    A   A   GR+ I Y D+ + R  D+ L F+E ++PP
Sbjct:   61 PLTIPKGSIKRIMKIDGDVNQVANDAIILVAKATELFMEKLTKDAHDIATANGRKIINYNDLVNARELDSELHFMEPILPP 141          
BLAST of mRNA_D-herbacea_M_contig96.16049.1 vs. uniprot
Match: A0A835YPZ2_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ2_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 7.310e-10
Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 0
Query:  131 PREKDLPVGLPKSMVRRIMKL-GEDTRNVSNEALVVVVKASELFLEKFAARAFGHAEKLGRRTIKYQDVSDVRVNDANLLFLEAVVP 216
            P  + L +  PK  V+ IM+L G+D   +SNEA+ +V KASE FLEK+A   +  A    RR I+YQD+    ++   L+FL  VVP
Sbjct:   57 PYSQQLELAFPKGKVKSIMRLAGDDIEKISNEAISLVGKASECFLEKYAQDCWTVATDNRRRVIQYQDLRQTHLSSEALVFLRGVVP 143          
BLAST of mRNA_D-herbacea_M_contig96.16049.1 vs. uniprot
Match: F0ZTN1_DICPU (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZTN1_DICPU)

HSP 1 Score: 61.2 bits (147), Expect = 3.080e-8
Identity = 29/77 (37.66%), Postives = 50/77 (64.94%), Query Frame = 0
Query:  140 LPKSMVRRIMKLGEDTRNVSNEALVVVVKASELFLEKFAARAFGHAEKLGRRTIKYQDVSDVRVNDANLLFLEAVVP 216
            LP + ++RIMK  +D + +S++AL++V K++ELFL+ F   A+   +  GR+ + Y+D+S    +  NL FL  +VP
Sbjct:   84 LPIARIKRIMKNDKDVKLISSDALMLVTKSTELFLDYFCKEAYKKTKSQGRKILSYKDISSAIKDIENLTFLTEIVP 160          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig96.16049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWZ4_9PHAE2.680e-4279.80CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ec... [more]
D8LBX1_ECTSI2.400e-4178.79Histone-like transcription factor family (CBF/NF-Y... [more]
A0A7S2G0X5_9STRA1.280e-1548.10Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0Y9H8_AURAN4.940e-1445.45CBFD_NFYB_HMF domain-containing protein (Fragment)... [more]
W7TNB3_9STRA2.950e-1341.46Histone-like transcription factor family protein n... [more]
A0A7S2RT01_9STRA4.820e-1345.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2UXP1_9STRA2.730e-1246.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3JZM4_9STRA8.700e-1240.74Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A835YPZ2_9STRA7.310e-1042.53CBFD_NFYB_HMF domain-containing protein n=1 Tax=Tr... [more]
F0ZTN1_DICPU3.080e-837.66CBFD_NFYB_HMF domain-containing protein n=1 Tax=Di... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunM male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 140..199
e-value: 3.2E-15
score: 56.2
IPR009072Histone-foldGENE3D1.10.20.10coord: 122..216
e-value: 3.8E-18
score: 67.8
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 122..216
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 121..216
NoneNo IPR availablePANTHERPTHR10252:SF93DNA POLYMERASE EPSILON SUBUNIT Ccoord: 121..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig96contigD-herbacea_M_contig96:401174..408371 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig96.16049.1mRNA_D-herbacea_M_contig96.16049.1Desmarestia herbacea DmunM malemRNAD-herbacea_M_contig96 400221..408433 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_M_contig96.16049.1 ID=prot_D-herbacea_M_contig96.16049.1|Name=mRNA_D-herbacea_M_contig96.16049.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=218bp
MDIEARPEVSPAPATPQSYVPPLPPPSQLGQEQAQVPPPPAETPDTAAVA
GITQEGVDTTSSAVVATTVTATDKFAQPPQEGSSIAPASATPADDSRTDG
GGGGGGGEDSKDGGESREGGGKEGSSRPKRPREKDLPVGLPKSMVRRIMK
LGEDTRNVSNEALVVVVKASELFLEKFAARAFGHAEKLGRRTIKYQDVSD
VRVNDANLLFLEAVVPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003958CBFA_NFYB_domain