prot_D-herbacea_M_contig94.15971.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_M_contig94.15971.1
Unique Nameprot_D-herbacea_M_contig94.15971.1
Typepolypeptide
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length366
Homology
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BLAST of mRNA_D-herbacea_M_contig94.15971.1 vs. uniprot
Match: A0A6H5KR72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR72_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 2.270e-47
Identity = 214/323 (66.25%), Postives = 241/323 (74.61%), Query Frame = 0 
Query:   15 GAQDLVVHHTWHPPASPAPALQNSRATAGIEGAAGIRSLENSPERTLRPRAAKKSAFNMKGLIKSVSTHSFTRRSAEGATTNRTQNPTLEPKGWLLEKQGKLDEAEMMYSRHCLRSQKHHGKESLSLANDLDRLAHLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIAKRVAHAYETKLGPDDIKVASSLNNLAGLLASLGETDEALPLFTRSHDIYVRQLGEYHPHTVATQLWLQQLSTPXXXXXRRHRPSLDGR 337
            G  +L+ H TWHP AS A A    R    ++  A   SL NSPER  R  A KKS FNMKGL+ SVS+HSF+RR+  G    +  +  ++ KGW LEKQGKLD+AE+MYSRHC+R+QK+HGKESLSLA++LDRL H+LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                         NN+AGLLA+ G+ +EALPLF RSHDIYVR LGE HPH+VATQLW+QQLS P     R  RP+   R
Sbjct:    7 GKGELLGHSTWHPEASSA-AEAAPRPNGLVQDGAST-SLNNSPERARRA-APKKSGFNMKGLLSSVSSHSFSRRTKPGGA--KKSSSEVDTKGWFLEKQGKLDQAELMYSRHCVRAQKNHGKESLSLADNLDRLVHVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNVAGLLATTGKPEEALPLFARSHDIYVRHLGENHPHSVATQLWVQQLSAPAPPPRRARRPAYPPR 324
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig94.15971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KR72_9PHAE2.270e-4766.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunM male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 142..175
e-value: 40.0
score: 9.7
coord: 100..133
e-value: 390.0
score: 1.0
coord: 268..301
e-value: 25.0
score: 11.4
coord: 184..217
e-value: 0.3
score: 20.2
NoneNo IPR availablePFAMPF13424TPR_12coord: 228..298
e-value: 2.2E-11
score: 43.9
coord: 147..215
e-value: 5.1E-14
score: 52.3
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 180..316
coord: 109..252
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 180..316
coord: 109..252
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 102..251
e-value: 3.0E-31
score: 110.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 252..320
e-value: 2.6E-14
score: 55.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 106..297
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 142..217
score: 9.8
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 268..301
score: 7.105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig94contigD-herbacea_M_contig94:876449..904340 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig94.15971.1mRNA_D-herbacea_M_contig94.15971.1Desmarestia herbacea DmunM malemRNAD-herbacea_M_contig94 876218..904495 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_M_contig94.15971.1 ID=prot_D-herbacea_M_contig94.15971.1|Name=mRNA_D-herbacea_M_contig94.15971.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=366bp
MSDEQSGPGGRGDGGAQDLVVHHTWHPPASPAPALQNSRATAGIEGAAGI
RSLENSPERTLRPRAAKKSAFNMKGLIKSVSTHSFTRRSAEGATTNRTQN
PTLEPKGWLLEKQGKLDEAEMMYSRHCLRSQKHHGKESLSLANDLDRLAH
LLHIEGKLEEAEPLSRRALEIRRKALGEENEQVATAYVNLGRILEEKESY
ADSLSYLKKGLAIRERVLEDGHPDTVSALAWIGDIHCKRENYQEGLLIAK
RVAHAYETKLGPDDIKVASSLNNLAGLLASLGETDEALPLFTRSHDIYVR
QLGEYHPHTVATQLWLQQLSTPPPPPPRRHRPSLDGRPAIGDRLPSPPPP
LMEGNAESEDGSVGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat