prot_D-herbacea_M_contig94.15953.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_M_contig94.15953.1
Unique Nameprot_D-herbacea_M_contig94.15953.1
Typepolypeptide
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length231
Homology
BLAST of mRNA_D-herbacea_M_contig94.15953.1 vs. uniprot
Match: D7FKW4_ECTSI (Chloroplast 50S ribosomal protein L15 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW4_ECTSI)

HSP 1 Score: 377 bits (967), Expect = 9.600e-131
Identity = 193/232 (83.19%), Postives = 207/232 (89.22%), Query Frame = 0
Query:    1 MKASLATATLFFVGTANAFFAPTAFTGQQL-AGVSAPSHTS-GVTMKIFDWKRRQNPEGIVLDEVRADTLKSAPGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTSLYRRLPKMVGRPMGPGHTKKQFNLIHLDALNTVDADSTVNFDSLLADGKLTKTKHKWHKVVGGQELMTTGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNAVLVMDEDDEE 230
            MKA+LAT  LF VG ANAFFAPTAFTGQQL AG SAPS T+ GVTMKIFDWKRR++ +G+VLD V  DTLK APGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQ  LYRRLPK+VGRPMGPGHTKKQFNLI LDALN +D  +TVNF+SL A GK+TKTKH+WHKVVGG EL TTGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTN VL MDE++EE
Sbjct:    1 MKATLATTALFCVGVANAFFAPTAFTGQQLTAGTSAPSRTTTGVTMKIFDWKRRESEDGLVLDRVAVDTLKPAPGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRAAGKVTKTKHRWHKVVGGMELETTGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVLSMDEEEEE 232          
BLAST of mRNA_D-herbacea_M_contig94.15953.1 vs. uniprot
Match: A0A835Z4H5_9STRA (Chloroplast 50S ribosomal protein L15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4H5_9STRA)

HSP 1 Score: 254 bits (648), Expect = 2.560e-82
Identity = 133/225 (59.11%), Postives = 162/225 (72.00%), Query Frame = 0
Query:    1 MKASLATATLFFVGTANAFFAPTAFTGQQLAGVSAPSHTSGVTMKIFDWKRRQNPE-GIVLDEVRADTLKSAPGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTSLYRRLPKMVGRPMGPGHTKKQFNLIHLDALNTVDADSTVNFDSLLADGKLTKTKHKWHKVVGGQELMTTGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNAVLVM 224
            M++ L  A    +   +  F  +AF GQ L   +  + +S ++MKIFDWKRR++    + + E+   TL  +PGSR R  RKGRGI+AGQGASCGFGMRGQ+SRSGPGVRAGFEGGQ  LYRRLPK VGRPMGPGHTKK+F+LI L+ALN+    +TV+F++L   G LTKT  +WHKVVG  EL   GLTVQAH FT SA EAIE  GGKCQLLSPTTN ++ M
Sbjct:    1 MRSFLYLAACLVIAAVSDAFTASAFHGQALCAATGKA-SSSISMKIFDWKRRESDSFNLAVTELSPATLTPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVVGNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIVDM 224          
BLAST of mRNA_D-herbacea_M_contig94.15953.1 vs. uniprot
Match: A0A836CHQ3_9STRA (Chloroplast 50S ribosomal protein L15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ3_9STRA)

HSP 1 Score: 253 bits (646), Expect = 5.320e-82
Identity = 134/213 (62.91%), Postives = 156/213 (73.24%), Query Frame = 0
Query:   13 VGTANAFFAPTAFTGQQLAGVSAPSHTSGVTMKIFDWKRRQNPEG-IVLDEVRADTLKSAPGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTSLYRRLPKMVGRPMGPGHTKKQFNLIHLDALNTVDADSTVNFDSLLADGKLTKTKHKWHKVVGGQELMTTGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNAVLVM 224
            V  A+A+ A +AF GQ + G      ++ V+MKIFDWKRR +      + E+   TL  +PGSR R  RKGRGI+AGQGASCGFGMRGQ+SRSGPGVRAGFEGGQ  LYRRLPK VGRPMGPGHTKK+F+LI L+ALN+    STV+F++L   G LTKT  KWHKVVG  EL    LTVQAH FT SA EAIE  GGKCQLLSPTTN ++ M
Sbjct:   14 VAVADAWVATSAFNGQAV-GTHTCKASNAVSMKIFDWKRRDDDSANTAVKELSPATLVPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGSTVSFETLHEQGTLTKTSLKWHKVVGNGELNVKNLTVQAHAFTGSAKEAIEGAGGKCQLLSPTTNEIVDM 225          
BLAST of mRNA_D-herbacea_M_contig94.15953.1 vs. uniprot
Match: A0A448ZNF8_9STRA (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNF8_9STRA)

HSP 1 Score: 228 bits (580), Expect = 4.980e-72
Identity = 122/203 (60.10%), Postives = 144/203 (70.94%), Query Frame = 0
Query:   25 FTGQQLAGVSAPSHTSGVTMKIFDWKRRQNPEGIVLD----EVRADTLKSAPGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTSLYRRLPKMVGRPMGPGHTKKQFNLIHLDALNTVDADSTVNFDSLLADGKLTKTKHKWHKVVGGQELMTT-GLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNAVL 222
            FTG +LA VS  S  + ++MK+ DWKRR   E  + D    E   D+L+ APGSR++  RKGRGI+AGQGA+CGFGMRGQKSRSG   R GFEGGQ  LYRRLPK  GRPMGPGHTKK++NLI LDALN V   ST NF+SL     +TK+KH  HKVV G+E  T   +TVQAH FTKSA  AIE  GGKC+LL P+T  V+
Sbjct:   21 FTGTRLAAVSTSSANT-LSMKLHDWKRRTADESDINDVENYEFTLDSLRPAPGSRKKKTRKGRGISAGQGATCGFGMRGQKSRSGRPTRPGFEGGQQPLYRRLPKFTGRPMGPGHTKKEYNLIQLDALNGVAPGSTCNFESLFESKAVTKSKHSTHKVVVGREEFTAKDITVQAHAFTKSARAAIEGAGGKCELLKPSTGEVI 222          
BLAST of mRNA_D-herbacea_M_contig94.15953.1 vs. uniprot
Match: A0A7S2V549_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V549_9STRA)

HSP 1 Score: 228 bits (581), Expect = 5.170e-72
Identity = 130/215 (60.47%), Postives = 154/215 (71.63%), Query Frame = 0
Query:   20 FAPTAFTGQQLAGVSAPSHTSGVTMKIFDWKRRQ-NPEGIVLDEVRADTLKSAPGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTSLYRRLPKMVGRPMGPGHTKKQFNLIHLDALNTVDADSTVNFDSLLADGKLTK----TKHKWH-------KVVGGQELMTTGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNAVL 222
            F+P++F GQQLA V   S T+ V+MKI+DWK RQ N + I   E     L+ APGS +RHKRKGRGIAAGQGASCGFGMRGQKSRSG  VR GFEGGQT LYRR+PK+ GRPMGPGH K ++ L+  + L+ V+  STVNF+SL A GK+ K    TKHK +       KVVGG++L T GLTVQAH FT SA +AIE  GGKC +LS TTN  L
Sbjct:   18 FSPSSFGGQQLARVQGTS-TNTVSMKIYDWKNRQKNWKHIDEVEFTHTNLRPAPGSTKRHKRKGRGIAAGQGASCGFGMRGQKSRSGKSVRPGFEGGQTPLYRRIPKIRGRPMGPGHQKIEYALMQFNFLDGVEEGSTVNFESLRAAGKMPKQGKRTKHKRNSGNHQLIKVVGGRDLNTKGLTVQAHAFTASAKKAIEEAGGKCVVLSKTTNKPL 231          
BLAST of mRNA_D-herbacea_M_contig94.15953.1 vs. uniprot
Match: A0A7S1BKP2_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKP2_9STRA)

HSP 1 Score: 228 bits (580), Expect = 5.480e-72
Identity = 122/189 (64.55%), Postives = 135/189 (71.43%), Query Frame = 0
Query:   39 TSGVTMKIFDWKRRQNPEGIVLDEVR----ADTLKSAPGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTSLYRRLPKMVGRPMGPGHTKKQFNLIHLDALNTVDADSTVNFDSLLADGKLTKTKHKWHKVVGGQELMTT-GLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNAVL 222
            TS +TMK+FDWKRR+  E  + D        D LK APGSR R KRKGRGIAAGQGA+CGFGMRGQKSRSG   RAGFEGGQ  LYRRLPK VG+PMGPGH+K  +NLI LD LN     STVNF SL   G +TK+K   HKVV G++  T  GL VQAH FT SA  AIE  GGKC+LLSPTT AVL
Sbjct:   34 TSSLTMKVFDWKRREADESAINDAENFVFTLDNLKPAPGSRHRKKRKGRGIAAGQGATCGFGMRGQKSRSGRPTRAGFEGGQQPLYRRLPKFVGKPMGPGHSKTVYNLIKLDELNGAAEGSTVNFASLFESGDITKSKVGIHKVVTGKKEFTAKGLIVQAHAFTSSAQTAIEGAGGKCELLSPTTGAVL 222          
BLAST of mRNA_D-herbacea_M_contig94.15953.1 vs. uniprot
Match: A0A1Z5JPE4_FISSO (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPE4_FISSO)

HSP 1 Score: 227 bits (579), Expect = 8.290e-72
Identity = 121/193 (62.69%), Postives = 136/193 (70.47%), Query Frame = 0
Query:   34 SAPSHTSGVTMKIFDWKRRQNPEGIVLD----EVRADTLKSAPGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTSLYRRLPKMVGRPMGPGHTKKQFNLIHLDALNTVDADSTVNFDSLLADGKLTKTKHKWHKVVGGQELMTTGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNAVL 222
            S P  +S + MKIFDWKRR   E ++ D    E   D LK APGSR R  RKGRGIAAGQGASCGFGMRGQKSR+G   R GFEGGQ  LYRRLPK VG+P GPGH K  +N+I  DAL    A STV FDSLL    +TK+K   HKVV G+    + LTVQAH FTKSA +AIEA GGKC+LLSPTTNAV+
Sbjct:   35 SVPKSSSCLKMKIFDWKRRTADESLLNDVEKTEFTLDNLKPAPGSRHRKSRKGRGIAAGQGASCGFGMRGQKSRAGSPTRPGFEGGQIPLYRRLPKFVGKPTGPGHEKTIYNVISTDALEKAAAGSTVTFDSLLESKIVTKSKFDLHKVVMGKGTPASNLTVQAHAFTKSARQAIEAAGGKCELLSPTTNAVI 227          
BLAST of mRNA_D-herbacea_M_contig94.15953.1 vs. uniprot
Match: A0A7S3L4I4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4I4_9STRA)

HSP 1 Score: 227 bits (579), Expect = 8.570e-72
Identity = 117/199 (58.79%), Postives = 144/199 (72.36%), Query Frame = 0
Query:   32 GVSAPSHTSGVTMKIFDWKRRQNPEGIVLDEVRAD----TLKSAPGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTSLYRRLPKMVGRPMGPGHTKKQFNLIHLDALNTVDADSTVNFDSLLADGKLTKTKHKWHKVVGGQEL---MTTGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNAVLV 223
            G++ P   S +TMK+FDWKRR+  E  + +   A+    TLK+APGSR+   RKGRGIAAGQGA+CG+GMRGQKSR+G   R GFEGGQT LYRRLPK VG+P GPGHTK  +N I  D L  VDA STVNF+ LL  G +TK+K+  HK+VGG+     +++ LTVQAHGFT +A  AIE  GGKC++LSPTT  VLV
Sbjct:   30 GLAVPKSQSTLTMKVFDWKRREADESALNNPDGAEWTLATLKAAPGSRKPKTRKGRGIAAGQGATCGYGMRGQKSRAGRPTRPGFEGGQTPLYRRLPKFVGKPTGPGHTKTIYNTISTDVLQKVDAGSTVNFEGLLESGLITKSKYSIHKIVGGKNTDGAISSNLTVQAHGFTSAARTAIEGAGGKCEVLSPTTGQVLV 228          
BLAST of mRNA_D-herbacea_M_contig94.15953.1 vs. uniprot
Match: A0A1E7FLQ7_9STRA (Ribosomal protein L15 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLQ7_9STRA)

HSP 1 Score: 225 bits (574), Expect = 5.950e-71
Identity = 114/188 (60.64%), Postives = 137/188 (72.87%), Query Frame = 0
Query:   41 GVTMKIFDWKRRQNPEGIVLD----EVRADTLKSAPGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTSLYRRLPKMVGRPMGPGHTKKQFNLIHLDALNTVDADSTVNFDSLLADGKLTKTKHKWHKVVGGQELMTT-GLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNAVLV 223
            G+TMK++DWKRR   E  + D    E   D L+ APGSR+   RKGRGIAAGQGA+CGFGMRGQKSRSG   R GFEGGQT LYRRLPK  GRPMGPGH+KKQ+N+I LD LN VD+ S  NF+SL   G +TK+K+  HK+V G++  T   +TVQAH FTK+A  AIE  GGKC+LL P+T  V+V
Sbjct:   44 GMTMKLYDWKRRDADESAINDVESFEFTLDNLRPAPGSRKSRTRKGRGIAAGQGATCGFGMRGQKSRSGRPTRPGFEGGQTPLYRRLPKFTGRPMGPGHSKKQYNIIKLDQLNNVDSGSVCNFESLFTAGSVTKSKYDTHKIVVGKDDFTAKDITVQAHAFTKTARTAIEDAGGKCELLKPSTGEVIV 231          
BLAST of mRNA_D-herbacea_M_contig94.15953.1 vs. uniprot
Match: A0A7S2K337_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K337_9STRA)

HSP 1 Score: 224 bits (572), Expect = 8.120e-71
Identity = 119/202 (58.91%), Postives = 138/202 (68.32%), Query Frame = 0
Query:   25 FTGQQLAGVSAPSHTSGVTMKIFDWKRRQNPEGIVLD----EVRADTLKSAPGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTSLYRRLPKMVGRPMGPGHTKKQFNLIHLDALNTVDADSTVNFDSLLADGKLTKTKHKWHKVVGGQELMTTGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNAVL 222
            F+G QL   +  S+ S + MK++DWKRR+  E  + D    E   D +K APGSR+R  RKGRGI+AGQGA+CGFGMRGQK+RSG   R GFEGGQ  LYRRLPK VGRP GPGH K  +N I L  LN     STVNFDSL      TK+K+  HK+VGG EL   GLTVQAH FTKSA EAIEA GGKC+LL  TT  V+
Sbjct:   23 FSGNQLQCTT--SNQSNLNMKLYDWKRREADESAINDVENFEFTLDNIKPAPGSRKRFTRKGRGISAGQGATCGFGMRGQKARSGRPTRPGFEGGQQPLYRRLPKFVGRPTGPGHEKTIYNTIKLSELNGAAEGSTVNFDSLFETKATTKSKYSIHKIVGGTELTAKGLTVQAHAFTKSAREAIEASGGKCELLKATTGEVI 222          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig94.15953.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKW4_ECTSI9.600e-13183.19Chloroplast 50S ribosomal protein L15 n=1 Tax=Ecto... [more]
A0A835Z4H5_9STRA2.560e-8259.11Chloroplast 50S ribosomal protein L15 n=1 Tax=Trib... [more]
A0A836CHQ3_9STRA5.320e-8262.91Chloroplast 50S ribosomal protein L15 n=1 Tax=Trib... [more]
A0A448ZNF8_9STRA4.980e-7260.10Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A7S2V549_9STRA5.170e-7260.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1BKP2_9STRA5.480e-7264.55Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A1Z5JPE4_FISSO8.290e-7262.69Ribosomal_L18e/L15P domain-containing protein n=2 ... [more]
A0A7S3L4I4_9STRA8.570e-7258.79Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1E7FLQ7_9STRA5.950e-7160.64Ribosomal protein L15 n=1 Tax=Fragilariopsis cylin... [more]
A0A7S2K337_9STRA8.120e-7158.91Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunM male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.100.10.10coord: 135..215
e-value: 3.8E-14
score: 54.4
NoneNo IPR availablePANTHERPTHR12934:SF1154S RIBOSOMAL PROTEIN L10, MITOCHONDRIALcoord: 63..220
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..230
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.676
IPR005749Ribosomal protein L15, bacterial-typeTIGRFAMTIGR01071TIGR01071coord: 67..211
e-value: 7.1E-33
score: 111.4
IPR005749Ribosomal protein L15, bacterial-typePANTHERPTHR1293450S RIBOSOMAL PROTEIN L15coord: 63..220
IPR021131Ribosomal protein L18e/L15PPFAMPF00828Ribosomal_L27Acoord: 89..212
e-value: 2.7E-25
score: 89.5
IPR030878Ribosomal protein L15HAMAPMF_01341Ribosomal_L15coord: 65..214
score: 16.172
IPR036227Ribosomal L18e/L15P superfamilySUPERFAMILY52080Ribosomal proteins L15p and L18ecoord: 67..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig94contigD-herbacea_M_contig94:624702..631141 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig94.15953.1mRNA_D-herbacea_M_contig94.15953.1Desmarestia herbacea DmunM malemRNAD-herbacea_M_contig94 624645..639184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_M_contig94.15953.1 ID=prot_D-herbacea_M_contig94.15953.1|Name=mRNA_D-herbacea_M_contig94.15953.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=231bp
MKASLATATLFFVGTANAFFAPTAFTGQQLAGVSAPSHTSGVTMKIFDWK
RRQNPEGIVLDEVRADTLKSAPGSRQRHKRKGRGIAAGQGASCGFGMRGQ
KSRSGPGVRAGFEGGQTSLYRRLPKMVGRPMGPGHTKKQFNLIHLDALNT
VDADSTVNFDSLLADGKLTKTKHKWHKVVGGQELMTTGLTVQAHGFTKSA
VEAIEAKGGKCQLLSPTTNAVLVMDEDDEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036227L18e/L15P_sf
IPR030878Ribosomal_L15
IPR021131Ribosomal_L18e/L15P
IPR005749Ribosomal_L15_bac-type