prot_D-herbacea_M_contig94.15944.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_M_contig94.15944.1
Unique Nameprot_D-herbacea_M_contig94.15944.1
Typepolypeptide
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length224
Homology
BLAST of mRNA_D-herbacea_M_contig94.15944.1 vs. uniprot
Match: D7FKX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKX2_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 1.040e-73
Identity = 146/233 (62.66%), Postives = 163/233 (69.96%), Query Frame = 0
Query:    1 MVLRSLSRAGVEIGVKVVGKGRSVAAISH--KLAGREARHSSSWVGQGQLGRSHASSYRQGGLGAGTQLFKLVETDLMSKELTRYGPSDAEQLGLHSVQDVLADIAAATS-----ALPEAVVAVTNETPEDTEAAPNSAAAPAVPEEDVLAAWGLGPRVSDSAEEE---VEVVSKGGEASLEEGLEKMAIKRTYQPSTIKRKRKHGFLYRAKTRLGKKILQRRQEKGRWRLGI 223
            M LRSLSRAGVE+G +VVG G     + H  +  G   R  SS VGQG   R  A S+RQG LGAGTQLFKLVETDLMSKELTRYGP+DAE LGLHS+QDVL+DIAAAT      A P       +       A    AAAPAV EE+VLAAWGLGP V+D +E E      V + GE   E   EK+AIKRTYQPST+KRKRKHGFLYRAKTRLGKKIL+RRQ+KGRWRLGI
Sbjct:    1 MALRSLSRAGVEMGARVVGTGSKCCRVPHATRHVGGAERKMSSVVGQGPGHR--APSFRQGSLGAGTQLFKLVETDLMSKELTRYGPADAEHLGLHSIQDVLSDIAAATLTPHKLAAPAVTAVAPSAEVASVPATEEPAAAPAVREEEVLAAWGLGPVVTDGSEVEGIQAPPVGEVGEEGGEVSNEKVAIKRTYQPSTLKRKRKHGFLYRAKTRLGKKILRRRQDKGRWRLGI 231          
BLAST of mRNA_D-herbacea_M_contig94.15944.1 vs. uniprot
Match: RL34_THEAB (50S ribosomal protein L34 n=7 Tax=Thermotogales TaxID=2419 RepID=RL34_THEAB)

HSP 1 Score: 60.8 bits (146), Expect = 2.980e-9
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 0
Query:  180 IKRTYQPSTIKRKRKHGFLYRAKTRLGKKILQRRQEKGRWRLGI 223
            +KRTYQPS IKRKR HGFL R KT  G+K+L+ R+ KGRWRL +
Sbjct:    1 MKRTYQPSRIKRKRTHGFLARKKTAGGRKVLKNRRRKGRWRLAV 44          
BLAST of mRNA_D-herbacea_M_contig94.15944.1 vs. uniprot
Match: A0A2N7Q8D5_9BACT (50S ribosomal protein L34 n=5 Tax=cellular organisms TaxID=131567 RepID=A0A2N7Q8D5_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 4.160e-9
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 0
Query:  180 IKRTYQPSTIKRKRKHGFLYRAKTRLGKKILQRRQEKGRWRLGI 223
            +KRTYQPS IK KRKHGF  R KTR G++IL+ R++KGRWRL +
Sbjct:    1 MKRTYQPSRIKMKRKHGFRARMKTRSGRRILKNRRKKGRWRLTV 44          
BLAST of mRNA_D-herbacea_M_contig94.15944.1 vs. uniprot
Match: A0A7S3NIP4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIP4_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 5.830e-9
Identity = 30/49 (61.22%), Postives = 39/49 (79.59%), Query Frame = 0
Query:  173 EGLEKMAIKRTYQPSTIKRKRKHGFLYRAKTRLGKKILQRRQEKGRWRL 221
            E + K AIKRT+QPS I+RKRKHGFL R  ++ G+KI+ RR+ KGRWR+
Sbjct:  109 EPITKQAIKRTFQPSIIRRKRKHGFLSRINSKKGRKIINRRKNKGRWRI 157          
BLAST of mRNA_D-herbacea_M_contig94.15944.1 vs. uniprot
Match: F8C4M3_THEGP (50S ribosomal protein L34 n=5 Tax=cellular organisms TaxID=131567 RepID=F8C4M3_THEGP)

HSP 1 Score: 58.9 bits (141), Expect = 1.570e-8
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0
Query:  180 IKRTYQPSTIKRKRKHGFLYRAKTRLGKKILQRRQEKGRWRLGI 223
            +KRTYQPS IK KR+HGF  R KTR G++IL+ R+ KGRWRL +
Sbjct:    1 MKRTYQPSRIKMKRRHGFRARMKTRSGRRILRNRRRKGRWRLTV 44          
BLAST of mRNA_D-herbacea_M_contig94.15944.1 vs. uniprot
Match: UPI001A97F9D2 (50S ribosomal protein L34 n=1 Tax=Thermosipho ferrireducens TaxID=2571116 RepID=UPI001A97F9D2)

HSP 1 Score: 58.9 bits (141), Expect = 1.570e-8
Identity = 27/44 (61.36%), Postives = 36/44 (81.82%), Query Frame = 0
Query:  180 IKRTYQPSTIKRKRKHGFLYRAKTRLGKKILQRRQEKGRWRLGI 223
            +KRTYQPS IKRKR HGFL R+++  G+KIL+ R+ KGRW+L +
Sbjct:    1 MKRTYQPSRIKRKRTHGFLARSRSASGRKILKNRRRKGRWKLSV 44          
BLAST of mRNA_D-herbacea_M_contig94.15944.1 vs. uniprot
Match: A0A2N7PKN3_9BACT (50S ribosomal protein L34 n=5 Tax=Thermodesulfobacteriaceae TaxID=188711 RepID=A0A2N7PKN3_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 2.230e-8
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0
Query:  181 KRTYQPSTIKRKRKHGFLYRAKTRLGKKILQRRQEKGRWRLGI 223
            KRTYQPS +K KRKHGF  R KTR G++IL+ R+ KGRWRL +
Sbjct:    3 KRTYQPSRLKMKRKHGFRARMKTRSGRRILKNRRRKGRWRLTV 45          
BLAST of mRNA_D-herbacea_M_contig94.15944.1 vs. uniprot
Match: A0A7V5NYF3_9BACT (50S ribosomal protein L34 n=1 Tax=Thermodesulfatator atlanticus TaxID=501497 RepID=A0A7V5NYF3_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 3.050e-8
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 0
Query:  180 IKRTYQPSTIKRKRKHGFLYRAKTRLGKKILQRRQEKGRWRLGI 223
            +KRTYQPS IKRKR HGF  R +TR G++IL  R+ KGRWRL +
Sbjct:    1 MKRTYQPSRIKRKRVHGFRARMRTRAGRRILANRRRKGRWRLTV 44          
BLAST of mRNA_D-herbacea_M_contig94.15944.1 vs. uniprot
Match: A0A7S2CLU0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CLU0_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.290e-8
Identity = 28/46 (60.87%), Postives = 41/46 (89.13%), Query Frame = 0
Query:  178 MAIKRTYQPSTIKRKRKHGFLYRAKTRLGKKILQRRQEKGRWRLGI 223
            +AIKRT+QPST+++KR+HGFL R ++R+G+KI+QRR+ KGR RL +
Sbjct:  159 LAIKRTFQPSTVRKKRQHGFLVRIRSRVGRKIVQRRRNKGRSRLSL 204          
BLAST of mRNA_D-herbacea_M_contig94.15944.1 vs. uniprot
Match: A0A2E9GUB9_9DELT (50S ribosomal protein L34 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E9GUB9_9DELT)

HSP 1 Score: 58.2 bits (139), Expect = 3.400e-8
Identity = 28/44 (63.64%), Postives = 37/44 (84.09%), Query Frame = 0
Query:  180 IKRTYQPSTIKRKRKHGFLYRAKTRLGKKILQRRQEKGRWRLGI 223
            +KRTYQPS I+R+RKHG+  R KTR G++IL+RR+ KGRWRL +
Sbjct:    1 MKRTYQPSRIRRRRKHGWRARMKTRGGREILRRRRAKGRWRLVV 44          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig94.15944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKX2_ECTSI1.040e-7362.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
RL34_THEAB2.980e-965.9150S ribosomal protein L34 n=7 Tax=Thermotogales Ta... [more]
A0A2N7Q8D5_9BACT4.160e-965.9150S ribosomal protein L34 n=5 Tax=cellular organis... [more]
A0A7S3NIP4_9STRA5.830e-961.22Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F8C4M3_THEGP1.570e-863.6450S ribosomal protein L34 n=5 Tax=cellular organis... [more]
UPI001A97F9D21.570e-861.3650S ribosomal protein L34 n=1 Tax=Thermosipho ferr... [more]
A0A2N7PKN3_9BACT2.230e-865.1250S ribosomal protein L34 n=5 Tax=Thermodesulfobac... [more]
A0A7V5NYF3_9BACT3.050e-863.6450S ribosomal protein L34 n=1 Tax=Thermodesulfatat... [more]
A0A7S2CLU0_9STRA3.290e-860.87Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2E9GUB9_9DELT3.400e-863.6450S ribosomal protein L34 n=1 Tax=Deltaproteobacte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunM male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000271Ribosomal protein L34PFAMPF00468Ribosomal_L34coord: 181..221
e-value: 2.4E-18
score: 65.8
IPR000271Ribosomal protein L34TIGRFAMTIGR01030TIGR01030coord: 181..222
e-value: 8.3E-16
score: 55.9
IPR000271Ribosomal protein L34PANTHERPTHR14503MITOCHONDRIAL RIBOSOMAL PROTEIN 34 FAMILY MEMBERcoord: 135..221
IPR000271Ribosomal protein L34HAMAPMF_00391Ribosomal_L34coord: 180..223
score: 13.155
IPR020939Ribosomal protein L34, conserved sitePROSITEPS00784RIBOSOMAL_L34coord: 181..200
NoneNo IPR availablePRODOMPD003101coord: 183..218
e-value: 6.0E-7
score: 127.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig94contigD-herbacea_M_contig94:470722..474314 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig94.15944.1mRNA_D-herbacea_M_contig94.15944.1Desmarestia herbacea DmunM malemRNAD-herbacea_M_contig94 470579..474468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_M_contig94.15944.1 ID=prot_D-herbacea_M_contig94.15944.1|Name=mRNA_D-herbacea_M_contig94.15944.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=224bp
MVLRSLSRAGVEIGVKVVGKGRSVAAISHKLAGREARHSSSWVGQGQLGR
SHASSYRQGGLGAGTQLFKLVETDLMSKELTRYGPSDAEQLGLHSVQDVL
ADIAAATSALPEAVVAVTNETPEDTEAAPNSAAAPAVPEEDVLAAWGLGP
RVSDSAEEEVEVVSKGGEASLEEGLEKMAIKRTYQPSTIKRKRKHGFLYR
AKTRLGKKILQRRQEKGRWRLGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020939Ribosomal_L34_CS
IPR000271Ribosomal_L34