prot_D-herbacea_M_contig93.15912.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_M_contig93.15912.1
Unique Nameprot_D-herbacea_M_contig93.15912.1
Typepolypeptide
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length321
Homology
BLAST of mRNA_D-herbacea_M_contig93.15912.1 vs. uniprot
Match: D8LMF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF5_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 3.100e-86
Identity = 138/188 (73.40%), Postives = 155/188 (82.45%), Query Frame = 0
Query:   75 MQDGSGFDRGAAGGQVPGGDGYAPGPGDQTPSWTPRNTIQDGFHEGVPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAMGVVYGEEETDWFQLEMWNRDAEYGAKVCKKGGRVGVTGALRINAWTDREGNPRTTLRIQVQNLELLDSRAEQASRSDKSDSNLWESERLQKADEA 262
            MQ G+ +  G  G ++PGG GY+   G  +P    R+   DGF EGVPRLN VFLTGYLGQDPKPKYFDSG+VVLNLSLAVKREYHPLERKA+G+V GEEETDWFQLEMWNRDAEY AKVCKKGGRVGVTG L + +W DREGN RTT++I VQNLE+LDSRAEQA RSD+SDSNLWESERL+K D A
Sbjct:    1 MQGGAAYGGGGEGREMPGGYGYSSSSGGASPGGYQRS-FSDGFDEGVPRLNMVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPLERKALGIVQGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGGLSLQSWIDREGNDRTTVKILVQNLEVLDSRAEQAMRSDRSDSNLWESERLEKMDAA 187          
BLAST of mRNA_D-herbacea_M_contig93.15912.1 vs. uniprot
Match: A0A835ZAA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA6_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.310e-46
Identity = 79/127 (62.20%), Postives = 98/127 (77.17%), Query Frame = 0
Query:  116 GFHEGVPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAMGVVYGEEETDWFQLEMWNRDAEYGAKVCKKGGRVGVTGALRINAWTDREGNPRTTLRIQVQNLELLDSRAEQASR 242
            GF E +P+LN V LTG LGQDP  +YFD GK V+ LSLAVKREYH LERKAMG+ YGEEETDWFQLE+W+R+AEY  KV  KG RVG+ G+L I+ W D+EG  R T ++ V N+E+L+++AE A R
Sbjct:   79 GFAESIPKLNAVLLTGRLGQDPVARYFDDGKCVVQLSLAVKREYHALERKAMGIRYGEEETDWFQLELWSREAEYAMKVAAKGLRVGIEGSLVIDCWEDQEGEERATAKVIVSNMEVLETKAEIAMR 205          
BLAST of mRNA_D-herbacea_M_contig93.15912.1 vs. uniprot
Match: A0A7S1YYF7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YYF7_TRICV)

HSP 1 Score: 157 bits (397), Expect = 6.320e-43
Identity = 71/123 (57.72%), Postives = 97/123 (78.86%), Query Frame = 0
Query:  117 FHEGVPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAMGVVYGEEETDWFQLEMWNRDAEYGAKVCKKGGRVGVTGALRINAWTDRE-GNPRTTLRIQVQNLELLDSRAE 238
            F + +PRLN V L+G +G DP+P+YFD GKVVLNLSLA KR+YHPLERK   + YGEEETDW+ LEMW RDAE+ +K   KG R+G+TG+L +++W D+  G PR+  +IQV++L+LL+++AE
Sbjct:  103 FEDHIPRLNIVTLSGRVGNDPEPRYFDDGKVVLNLSLACKRKYHPLERKVRNIKYGEEETDWWPLEMWGRDAEFVSKYVNKGARIGITGSLTMDSWVDKNTGEPRSKYKIQVKHLDLLETKAE 225          
BLAST of mRNA_D-herbacea_M_contig93.15912.1 vs. uniprot
Match: A0A7R9W4H7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W4H7_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.210e-42
Identity = 72/127 (56.69%), Postives = 98/127 (77.17%), Query Frame = 0
Query:  117 FHEGVPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAMGVVYGEEETDWFQLEMWNRDAEYGAKVCKKGGRVGVTGALRINAWTDRE-GNPRTTLRIQVQNLELLDSRAEQASR 242
            F + +PRLN V L+G +G DP+P+YFD GKVVLNLSLAV+R+YHPLERK   + YGEEETDWF LE+W RDAE+ +    KG R+G+TG+L +++W DR  G PRT  +I V++L++L++RAE  +R
Sbjct:  100 FEDHIPRLNIVTLSGRVGNDPEPRYFDDGKVVLNLSLAVQRKYHPLERKVRNIKYGEEETDWFPLELWGRDAEFASNFVDKGARIGITGSLMMDSWEDRNTGEPRTKHKILVKHLDILETRAEAEAR 226          
BLAST of mRNA_D-herbacea_M_contig93.15912.1 vs. uniprot
Match: A0A7S2SIA7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SIA7_9STRA)

HSP 1 Score: 152 bits (385), Expect = 6.590e-41
Identity = 73/123 (59.35%), Postives = 92/123 (74.80%), Query Frame = 0
Query:  117 FHEGVPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAMGVVYGEEETDWFQLEMWNRDAEYGAKVCKKGGRVGVTGALRINAWTDRE-GNPRTTLRIQVQNLELLDSRAE 238
            F E +PR+N+V L G +GQDP PKY D GKVVLNLSLAVKR+YHPLER    +  GEEETDWF LE+W RDAEY +K   KG R+ VTG L+I+ WTDR  G PR   +I V++L++L+++AE
Sbjct:  103 FEEHIPRVNSVTLVGRVGQDPDPKYLDDGKVVLNLSLAVKRKYHPLERNVRNIKSGEEETDWFPLEIWGRDAEYASKYVDKGSRMMVTGTLQIDTWTDRNTGEPRKKAKIIVRHLDILETKAE 225          
BLAST of mRNA_D-herbacea_M_contig93.15912.1 vs. uniprot
Match: A0A7S1ZHN3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZHN3_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.560e-38
Identity = 66/123 (53.66%), Postives = 94/123 (76.42%), Query Frame = 0
Query:  117 FHEGVPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAMGVVYGEEETDWFQLEMWNRDAEYGAKVCKKGGRVGVTGALRINAWTDRE-GNPRTTLRIQVQNLELLDSRAE 238
            F   +P+LN V L+G +G  P+P+YFD GKVVLN+ LAVKR+YHPLERK   + YG+EETDWF LE+W RDAE+ A+   KG R+G+TG+L I++WTD++ G  R   +I V++L++L+++AE
Sbjct:  109 FEPHIPKLNVVTLSGRVGNVPEPRYFDDGKVVLNMGLAVKRKYHPLERKVKNIQYGQEETDWFNLELWGRDAEFAARFVDKGSRIGITGSLAIDSWTDKQTGQYRRKPKIVVRHLDVLETKAE 231          
BLAST of mRNA_D-herbacea_M_contig93.15912.1 vs. uniprot
Match: B8C9K7_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9K7_THAPS)

HSP 1 Score: 141 bits (356), Expect = 2.620e-38
Identity = 68/123 (55.28%), Postives = 88/123 (71.54%), Query Frame = 0
Query:  117 FHEGVPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAMGVVYGEEETDWFQLEMWNRDAEYGAKVCKKGGRVGVTGALRINAWTDR-EGNPRTTLRIQVQNLELLDSRAE 238
            F E +P+LN V L G +G  P PKYFD GKVVLNLS+AVKR+YHPLERK   +  GEEETDWF LE W RDAEY     +KG R+G+TG+L ++ W D+  G  R   +I V+++++L+SRAE
Sbjct:    6 FDEHLPKLNVVTLVGRVGGTPDPKYFDDGKVVLNLSVAVKRKYHPLERKVRNIRSGEEETDWFPLEFWGRDAEYVTNYVEKGARIGITGSLVMDGWVDKMTGEQRRRPKIVVRHIDILESRAE 128          
BLAST of mRNA_D-herbacea_M_contig93.15912.1 vs. uniprot
Match: A0A7S2USN2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2USN2_9STRA)

HSP 1 Score: 142 bits (359), Expect = 9.500e-38
Identity = 69/124 (55.65%), Postives = 94/124 (75.81%), Query Frame = 0
Query:  117 FHEGVPRLNTVFLTGYLGQDP-KPKYFDSGKVVLNLSLAVKREYHPLERKAMGVVYGEEETDWFQLEMWNRDAEYGAKVCKKGGRVGVTGALRINAWTDRE-GNPRTTLRIQVQNLELLDSRAE 238
            F + +P+ N V L+G +G    +PKYFD GKVVL+LSLAVKR+YHPLER+A  +  G+EETDWF LE+W RDAEY AK  +KG R+GVTG+L ++ WTDR  G PR+  +I V+ L++L+++AE
Sbjct:   36 FADHIPKFNVVTLSGRVGNPQLEPKYFDDGKVVLSLSLAVKRKYHPLERRAYNIKSGDEETDWFALEIWGRDAEYAAKYVEKGSRIGVTGSLVVDNWTDRATGEPRSRPKILVKQLDILETKAE 159          
BLAST of mRNA_D-herbacea_M_contig93.15912.1 vs. uniprot
Match: A0A7S1DC37_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DC37_CYCTE)

HSP 1 Score: 143 bits (360), Expect = 2.200e-37
Identity = 69/119 (57.98%), Postives = 89/119 (74.79%), Query Frame = 0
Query:  121 VPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAMGVVYGEEETDWFQLEMWNRDAEYGAKVCKKGGRVGVTGALRINAWTDR-EGNPRTTLRIQVQNLELLDSRAE 238
            +P  N VF+ G +G DP+PKY DSGKVVLNLSLAVKR+YH LER A  +  GEEETDW++LE+W + AEY AK   KG R+G++G+LRI+ W DR  GN R   +I VQ L++L++RAE
Sbjct:   92 IPTFNNVFMVGRVGNDPEPKYLDSGKVVLNLSLAVKRKYHRLERIAKEIKSGEEETDWYRLEIWGQTAEYAAKYVTKGARIGLSGSLRIDQWEDRTSGNMRARPKIVVQELDILETRAE 210          
BLAST of mRNA_D-herbacea_M_contig93.15912.1 vs. uniprot
Match: A0A1Z5KE78_FISSO (Single-strand DNA-binding protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KE78_FISSO)

HSP 1 Score: 141 bits (356), Expect = 5.150e-37
Identity = 64/123 (52.03%), Postives = 93/123 (75.61%), Query Frame = 0
Query:  117 FHEGVPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAMGVVYGEEETDWFQLEMWNRDAEYGAKVCKKGGRVGVTGALRINAWTDRE-GNPRTTLRIQVQNLELLDSRAE 238
            + + V R NTV L+G +G +PK +YFD GKVV+NL+LAV+R+YHPLERK   + YG+EETDWF LE+W R AE+ +K   KG RV V G+L+++ WTD+E G PR+  ++ V+ L+++++RAE
Sbjct:   72 WDDTVARFNTVHLSGRIGAEPKTRYFDDGKVVVNLNLAVQRKYHPLERKHFNIAYGQEETDWFGLEIWGRTAEFASKYVDKGMRVSVIGSLQVDQWTDKESGEPRSRTKVVVRELDIMETRAE 194          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig93.15912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMF5_ECTSI3.100e-8673.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAA6_9STRA1.310e-4662.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1YYF7_TRICV6.320e-4357.72Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7R9W4H7_9STRA1.210e-4256.69Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2SIA7_9STRA6.590e-4159.35Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1ZHN3_9STRA1.560e-3853.66Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
B8C9K7_THAPS2.620e-3855.28Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S2USN2_9STRA9.500e-3855.65Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1DC37_CYCTE2.200e-3757.98Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1Z5KE78_FISSO5.150e-3752.03Single-strand DNA-binding protein n=2 Tax=Fistulif... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunM male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011344Single-stranded DNA-binding proteinTIGRFAMTIGR00621TIGR00621coord: 124..265
e-value: 1.9E-27
score: 94.6
IPR011344Single-stranded DNA-binding proteinPANTHERPTHR10302SINGLE-STRANDED DNA-BINDING PROTEINcoord: 124..261
IPR011344Single-stranded DNA-binding proteinHAMAPMF_00984SSBcoord: 124..237
score: 23.444
NoneNo IPR availableGENE3D2.40.50.140coord: 122..299
e-value: 5.4E-29
score: 103.1
NoneNo IPR availablePANTHERPTHR10302:SF10SINGLE-STRANDED DNA-BINDING PROTEINcoord: 124..261
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..321
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.752
IPR000424Primosome PriB/single-strand DNA-bindingPFAMPF00436SSBcoord: 124..233
e-value: 4.0E-22
score: 78.2
IPR000424Primosome PriB/single-strand DNA-bindingPROSITEPS50935SSBcoord: 124..234
score: 25.83
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 124..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig93contigD-herbacea_M_contig93:787710..809938 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig93.15912.1mRNA_D-herbacea_M_contig93.15912.1Desmarestia herbacea DmunM malemRNAD-herbacea_M_contig93 787641..809938 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_M_contig93.15912.1 ID=prot_D-herbacea_M_contig93.15912.1|Name=mRNA_D-herbacea_M_contig93.15912.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=321bp
MQWRCRHALAACFLVIPAADSFCPAVGRPHTFTTSLRQYGVPEAASGWRR
STASQRRPAASGIPKTAAKDVPLRMQDGSGFDRGAAGGQVPGGDGYAPGP
GDQTPSWTPRNTIQDGFHEGVPRLNTVFLTGYLGQDPKPKYFDSGKVVLN
LSLAVKREYHPLERKAMGVVYGEEETDWFQLEMWNRDAEYGAKVCKKGGR
VGVTGALRINAWTDREGNPRTTLRIQVQNLELLDSRAEQASRSDKSDSNL
WESERLQKADEAAARKREGSAGKGAGAASSAGGGGVYQSPENLEQQARKK
EAEDKWWSAEPDAPKGGSGVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR000424Primosome_PriB/ssb
IPR011344ssDNA-bd