prot_D-herbacea_M_contig93.15890.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_M_contig93.15890.1
Unique Nameprot_D-herbacea_M_contig93.15890.1
Typepolypeptide
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length191
Homology
[Close]
BLAST of mRNA_D-herbacea_M_contig93.15890.1 vs. uniprot
Match: A0A6H5J7A0_9PHAE (DUF1713 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7A0_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 6.000e-18
Identity = 77/201 (38.31%), Postives = 94/201 (46.77%), Query Frame = 0 
Query:    1 MLSVLRREARRLPGIRSLIPQAIDSVVEFPKSSRNSRLFS---VCSFVNGSSDERHQLTETLAVLGGW--HAVGNSEPWLWKRERQR-EGMS-SAKISEMLGGFEQTAKGLLRQWGHPLALFGTLPRVFTGTELGLLRQPLDEHEELRGEGNGWEGELFD--------GVWQTSVKRKRVTKMRKHKWRKRRRALRQSASR 186
            M S+  R+ARR  G+ +    ++   VE  ++   SRLF    +C F     D R    E   V  G         + W W       EG S   K+ E + G +Q   GLL+ W  PLAL G  P V  G     L     EH++   E    E E  D        GVW TSVKRKRVTKMRKHKWRKRR+  RQSASR
Sbjct:    1 MFSLPGRQARRSLGMGA----SVYRTVERYQTLGYSRLFGTSDLCVF----DDSRRTWVERGEVDKGTAQKPAAGGQMWRWTSPTGTWEGSSLPIKVYEAVQGLKQATAGLLQHWASPLALSGAFPFVLPGVGRPALLPQSPEHDQGCEEDEDEEEEGVDLIGGLSEGGVWATSVKRKRVTKMRKHKWRKRRKLQRQSASR 193
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig93.15890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J7A0_9PHAE6.000e-1838.31DUF1713 domain-containing protein n=2 Tax=Ectocarp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunM male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013177Domain of unknown function DUF1713SMARTSM01155DUF1713_2coord: 156..190
e-value: 0.0089
score: 25.2
IPR013177Domain of unknown function DUF1713PFAMPF08213DUF1713coord: 158..182
e-value: 2.3E-5
score: 24.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig93contigD-herbacea_M_contig93:195766..207132 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig93.15890.1mRNA_D-herbacea_M_contig93.15890.1Desmarestia herbacea DmunM malemRNAD-herbacea_M_contig93 195265..207155 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_M_contig93.15890.1 ID=prot_D-herbacea_M_contig93.15890.1|Name=mRNA_D-herbacea_M_contig93.15890.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=191bp
MLSVLRREARRLPGIRSLIPQAIDSVVEFPKSSRNSRLFSVCSFVNGSSD
ERHQLTETLAVLGGWHAVGNSEPWLWKRERQREGMSSAKISEMLGGFEQT
AKGLLRQWGHPLALFGTLPRVFTGTELGLLRQPLDEHEELRGEGNGWEGE
LFDGVWQTSVKRKRVTKMRKHKWRKRRRALRQSASRRVNN*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013177DUF1713