prot_D-herbacea_M_contig9.15669.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_M_contig9.15669.1
Unique Nameprot_D-herbacea_M_contig9.15669.1
Typepolypeptide
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length527
Homology
BLAST of mRNA_D-herbacea_M_contig9.15669.1 vs. uniprot
Match: A0A6H5KLF7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF7_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 2.680e-67
Identity = 197/466 (42.27%), Postives = 226/466 (48.50%), Query Frame = 0
Query:  113 GDDKRPDAFALLLQGSALSAAAHSSPDTPASRTPDQGMA---WGRFPDSGGDGKENRENAFSRMLA--------SAGK------KRKRPA-----------GSWSSNGAVKSGMATRFCECPVCGKTVIIERCGEHLDKECDG----PTTATTDASSPLSIGDSQTAGSNSISVESPPTATSPSPPAATPKYVAVPPLLAGAGACESALPTLSSSPAASAACHPGEVGAPADNEDEARRNAGGADDASR------------------ASRVPLPVANRDADTGVGEPKRAACLTQKRSQRAATTAARDGAAALAAAPAVMTTCPVCAKHVRADLCSLHLDTDCAGGA-KGKRLRQTERG--GCSSSSAAEDAKVVCMEDRPGEDESEAAGGLTALAAELTCPICLCLFEDAHALPCSHRFCLDCIQGCFRSSKRQECPLCKVPAWKRDLKRDVPLQNILLAYRRMA 525
            G D R DAFA LL  SA +  A SS  T ++  P  G A   W  F  S GDGK                    S G+      KRKRPA           G   + GA  +   TRFCECPVCGK V+IE C +HLD EC+G    P  AT  A SPLS        S  I             P ATP     PP    AG+C S L           A  P E G   D+   AR  A  A+DA R                  AS  P P A+   +                    A    R   AA  A    MT CPVC K ++ADLCSLHLDTDC+G    G  L++  R   G  +   A+  K V  +D      SEAAGGL ALAAELTCPICLC+FEDAH+LPCSHRFCL+CI GCF+SSKRQECPLCK+PAWKRDL RDV +QNI+ AYRRMA
Sbjct:   37 GSDCREDAFARLL--SAANRPAGSSTTTASTSQPAAGPASSSWDPFA-STGDGKXXXXXXXXXXXXXXXXXXXXSKGRSGPSSAKRKRPAVGSTLLSAAAAGGARAGGAGNAEALTRFCECPVCGKRVLIEMCSKHLDTECNGLDATPPAATETAKSPLSAATESRGASEPI-------------PPATP-----PPSALAAGSCRSVL-----------ASPPLEEGKGDDS--RARTAARVAEDAPRGQGQQPSGDAASSSARAAASTFPAPAASPAFEXXXXXXXXXXXXXXXXXXSRARKLGRKRVAAAEA----MTACPVCGKQIQADLCSLHLDTDCSGVTPSGGGLKEEVRDEVGSGNGGEADSGKAVPKKDVG----SEAAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKIPAWKRDLTRDVSIQNIIAAYRRMA 460          
BLAST of mRNA_D-herbacea_M_contig9.15669.1 vs. uniprot
Match: D8LC67_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC67_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 6.890e-58
Identity = 97/144 (67.36%), Postives = 113/144 (78.47%), Query Frame = 0
Query:  382 MTTCPVCAKHVRADLCSLHLDTDCAGGAKGKRLRQTERGGCSSSSAAEDAKVVCMEDRPGEDESEAAGGLTALAAELTCPICLCLFEDAHALPCSHRFCLDCIQGCFRSSKRQECPLCKVPAWKRDLKRDVPLQNILLAYRRMA 525
            MTTCPVC + V+ADLCSLHLDTDC+GG + + +R  +  G  +   A+  K V   D      SEAAGGL ALAAELTCPICLC+FEDAH+LPCSHRFCL+CI GCF+SSKRQECPLCK+PAWKRDL RDV +QNI+ AYRRMA
Sbjct:    1 MTTCPVCGEQVQADLCSLHLDTDCSGGGRKEEVR--DEVGSGNGGEADSGKTVPKRDTG----SEAAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKIPAWKRDLTRDVSIQNIIAAYRRMA 138          
BLAST of mRNA_D-herbacea_M_contig9.15669.1 vs. uniprot
Match: A0A8J5XEH0_DIALT (RING-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XEH0_DIALT)

HSP 1 Score: 77.8 bits (190), Expect = 2.110e-11
Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 0
Query:  447 AAGGL--TALAAELTCPICLCLFEDAHALPCSHRFCLDCIQGCFRSSKRQECPLCKVPAWKRDLKRDVPLQNIL 518
            AA GL    L AEL C ICL  F+D H+LPC H FCL CI     +++  +CPLC+ PAW+R L+++  L NI+
Sbjct:  479 AANGLPLACLEAELCCQICLATFDDPHSLPCQHTFCLSCIISHMVATRVNDCPLCRQPAWRRQLRKNHKLANIV 552          
BLAST of mRNA_D-herbacea_M_contig9.15669.1 vs. uniprot
Match: A0A4W3GZY8_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GZY8_CALMI)

HSP 1 Score: 65.5 bits (158), Expect = 1.120e-8
Identity = 29/74 (39.19%), Postives = 42/74 (56.76%), Query Frame = 0
Query:  453 ALAAELTCPICLCLFEDAHALPCSHRFCLDCIQGCFRSSKRQECPLCKVPAWKRDLKRDVPLQNILLAYRRMAI 526
            +LA +LTCP+CL LF D  +L C H FC  CI GC+   +   CP C+     R+L+   PL N+    R +++
Sbjct:    9 SLAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQEAHSCPECRRACPGRELRASRPLANLSERARNLSL 82          
BLAST of mRNA_D-herbacea_M_contig9.15669.1 vs. uniprot
Match: UPI001C3FC9B5 (nuclear factor 7, brain-like n=1 Tax=Callorhinchus milii TaxID=7868 RepID=UPI001C3FC9B5)

HSP 1 Score: 65.5 bits (158), Expect = 2.100e-8
Identity = 29/74 (39.19%), Postives = 42/74 (56.76%), Query Frame = 0
Query:  453 ALAAELTCPICLCLFEDAHALPCSHRFCLDCIQGCFRSSKRQECPLCKVPAWKRDLKRDVPLQNILLAYRRMAI 526
            +LA +LTCP+CL LF D  +L C H FC  CI GC+   +   CP C+     R+L+   PL N+    R +++
Sbjct:    9 SLAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQETHSCPECRRACPGRELRASRPLANLSERARNLSL 82          
BLAST of mRNA_D-herbacea_M_contig9.15669.1 vs. uniprot
Match: UPI0007BA9366 (LOW QUALITY PROTEIN: zinc-binding protein A33-like n=1 Tax=Poecilia formosa TaxID=48698 RepID=UPI0007BA9366)

HSP 1 Score: 60.8 bits (146), Expect = 8.510e-8
Identity = 26/67 (38.81%), Postives = 42/67 (62.69%), Query Frame = 0
Query:  457 ELTCPICLCLFEDAHALPCSHRFCLDCIQGCFRSSKRQECPLCKVPAWKRDLKRDVPLQNILLAYRR 523
            +L CP+CL +F++   L CSH FC +C++ C+R    +ECP+CK  + K D   ++ L+N+ L   R
Sbjct:    8 DLCCPVCLEIFKNPVILSCSHSFCKECLEKCWREKPVRECPVCKRRSSKADPLCNLALKNLCLLQER 74          
BLAST of mRNA_D-herbacea_M_contig9.15669.1 vs. uniprot
Match: A0A4W3GVR5_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GVR5_CALMI)

HSP 1 Score: 64.3 bits (155), Expect = 1.720e-7
Identity = 29/74 (39.19%), Postives = 42/74 (56.76%), Query Frame = 0
Query:  453 ALAAELTCPICLCLFEDAHALPCSHRFCLDCIQGCFRSSKRQECPLCKVPAWKRDLKRDVPLQNILLAYRRMAI 526
            +LA +LTCP+CL LF D  +L C H FC  CI GC+   +   CP C+     R+L+   PL N+    R +++
Sbjct:    9 SLAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQEAHFCPECRRACPGRELRASRPLANLSERARNLSL 82          
BLAST of mRNA_D-herbacea_M_contig9.15669.1 vs. uniprot
Match: A0A671WZZ6_SPAAU (Uncharacterized protein n=5 Tax=Sparus aurata TaxID=8175 RepID=A0A671WZZ6_SPAAU)

HSP 1 Score: 63.5 bits (153), Expect = 4.770e-7
Identity = 26/66 (39.39%), Postives = 40/66 (60.61%), Query Frame = 0
Query:  457 ELTCPICLCLFEDAHALPCSHRFCLDCIQGCFRSSKRQECPLCKVPAWKRDLKRDVPLQNILLAYR 522
            +L CP+C  +F +   L CSH FC DC+Q C+R  + QECP+C+  +  R     + L+N+  A+R
Sbjct:   11 DLCCPVCQDVFREPVVLSCSHSFCKDCLQSCWRQKQTQECPVCRTVSSTRQPPVSLVLKNLCEAFR 76          
BLAST of mRNA_D-herbacea_M_contig9.15669.1 vs. uniprot
Match: A0A8C0YH75_CYPCA (RING-type domain-containing protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C0YH75_CYPCA)

HSP 1 Score: 60.1 bits (144), Expect = 7.020e-7
Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 0
Query:  451 LTALAAELTCPICLCLFEDAHALPCSHRFCLDCIQGCFRSS-KRQECPLCK-VPAWKRDLKRDVPLQNILLAYRRMA 525
            L  L  ELTC ICLCLFE+  +L C H FC +C++  +  S     CP C+ V   K +LK++  L  +L AYR  A
Sbjct:    7 LLGLEEELTCSICLCLFENPVSLICGHSFCANCLEATWNDSVSSMSCPQCRMVFLSKPELKKNTVLSAVLDAYRIKA 83          
BLAST of mRNA_D-herbacea_M_contig9.15669.1 vs. uniprot
Match: A0A3Q4GKW0_NEOBR (Uncharacterized protein n=2 Tax=Neolamprologus brichardi TaxID=32507 RepID=A0A3Q4GKW0_NEOBR)

HSP 1 Score: 62.8 bits (151), Expect = 8.510e-7
Identity = 26/65 (40.00%), Postives = 41/65 (63.08%), Query Frame = 0
Query:  457 ELTCPICLCLFEDAHALPCSHRFCLDCIQGCFRSSKRQECPLCKVPAWKRDLKRDVPLQNILLAY 521
            +L+CP+C  +F+D   L CSH FC DC+Q C+R  + + CP+CK      D  R++ L+N+  A+
Sbjct:    5 DLSCPVCHDIFKDPVILSCSHSFCKDCLQLCWRDKQIKSCPICKTIPLLNDPPRNLALKNLCEAF 69          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig9.15669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLF7_9PHAE2.680e-6742.27RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LC67_ECTSI6.890e-5867.36RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A8J5XEH0_DIALT2.110e-1148.65RING-type domain-containing protein n=1 Tax=Diacro... [more]
A0A4W3GZY8_CALMI1.120e-839.19Uncharacterized protein n=1 Tax=Callorhinchus mili... [more]
UPI001C3FC9B52.100e-839.19nuclear factor 7, brain-like n=1 Tax=Callorhinchus... [more]
UPI0007BA93668.510e-838.81LOW QUALITY PROTEIN: zinc-binding protein A33-like... [more]
A0A4W3GVR5_CALMI1.720e-739.19Uncharacterized protein n=1 Tax=Callorhinchus mili... [more]
A0A671WZZ6_SPAAU4.770e-739.39Uncharacterized protein n=5 Tax=Sparus aurata TaxI... [more]
A0A8C0YH75_CYPCA7.020e-742.86RING-type domain-containing protein n=1 Tax=Cyprin... [more]
A0A3Q4GKW0_NEOBR8.510e-740.00Uncharacterized protein n=2 Tax=Neolamprologus bri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunM male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006642Zinc finger, Rad18-type putativeSMARTSM00734c2hc_5coord: 382..406
e-value: 0.059
score: 19.9
coord: 202..226
e-value: 1.3
score: 10.7
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 460..499
e-value: 1.1E-5
score: 34.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 460..500
score: 12.297
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 460..499
e-value: 6.9E-8
score: 32.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 442..525
e-value: 1.3E-18
score: 68.6
IPR031099BRCA1-associatedPANTHERPTHR13763BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1coord: 448..524
IPR011364Breast cancer type 1 susceptibility protein (BRCA1)PANTHERPTHR13763:SF0BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEINcoord: 448..524
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 475..484
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 450..521

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig9contigD-herbacea_M_contig9:1791663..1796010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig9.15669.1mRNA_D-herbacea_M_contig9.15669.1Desmarestia herbacea DmunM malemRNAD-herbacea_M_contig9 1791543..1796893 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_M_contig9.15669.1 ID=prot_D-herbacea_M_contig9.15669.1|Name=mRNA_D-herbacea_M_contig9.15669.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=527bp
MPGGLSSWLDDDTKANTINKRNSSSSSSSSSNRGNTTNNPLTTRAVPRSV
QAQPNRQPLTAVKGARALEISIIDVDAENPSDNDEEKTRVLGKTTPSDTP
NEPRSSCSSNLAGDDKRPDAFALLLQGSALSAAAHSSPDTPASRTPDQGM
AWGRFPDSGGDGKENRENAFSRMLASAGKKRKRPAGSWSSNGAVKSGMAT
RFCECPVCGKTVIIERCGEHLDKECDGPTTATTDASSPLSIGDSQTAGSN
SISVESPPTATSPSPPAATPKYVAVPPLLAGAGACESALPTLSSSPAASA
ACHPGEVGAPADNEDEARRNAGGADDASRASRVPLPVANRDADTGVGEPK
RAACLTQKRSQRAATTAARDGAAALAAAPAVMTTCPVCAKHVRADLCSLH
LDTDCAGGAKGKRLRQTERGGCSSSSAAEDAKVVCMEDRPGEDESEAAGG
LTALAAELTCPICLCLFEDAHALPCSHRFCLDCIQGCFRSSKRQECPLCK
VPAWKRDLKRDVPLQNILLAYRRMAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017907Znf_RING_CS
IPR011364BRCA1
IPR031099BRCA1-associated
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR001841Znf_RING
IPR006642Znf_Rad18_put