mRNA_D-herbacea_M_contig992.16268.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig992.16268.1
Unique NamemRNA_D-herbacea_M_contig992.16268.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig992.16268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig992contigD-herbacea_M_contig992:26116..30301 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size2707
Cds size1611
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig992.16268.1prot_D-herbacea_M_contig992.16268.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig992 26398..28008 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935827.519534-UTR-D-herbacea_M_contig992:26115..263971622935827.519534-UTR-D-herbacea_M_contig992:26115..26397Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig992 26116..26397 +
1690880722.7573001-UTR-D-herbacea_M_contig992:26115..263971690880722.7573001-UTR-D-herbacea_M_contig992:26115..26397Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig992 26116..26397 +
1622935827.5464172-UTR-D-herbacea_M_contig992:28008..280491622935827.5464172-UTR-D-herbacea_M_contig992:28008..28049Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig992 28009..28049 +
1690880722.7868087-UTR-D-herbacea_M_contig992:28008..280491690880722.7868087-UTR-D-herbacea_M_contig992:28008..28049Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig992 28009..28049 +
1622935827.5586495-UTR-D-herbacea_M_contig992:29528..303011622935827.5586495-UTR-D-herbacea_M_contig992:29528..30301Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig992 29529..30301 +
1690880722.8029642-UTR-D-herbacea_M_contig992:29528..303011690880722.8029642-UTR-D-herbacea_M_contig992:29528..30301Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig992 29529..30301 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935827.5300093-CDS-D-herbacea_M_contig992:26397..280081622935827.5300093-CDS-D-herbacea_M_contig992:26397..28008Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig992 26398..28008 +
1690880722.7717805-CDS-D-herbacea_M_contig992:26397..280081690880722.7717805-CDS-D-herbacea_M_contig992:26397..28008Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig992 26398..28008 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig992.16268.1

>prot_D-herbacea_M_contig992.16268.1 ID=prot_D-herbacea_M_contig992.16268.1|Name=mRNA_D-herbacea_M_contig992.16268.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=537bp
MTKECSNQGCTNHASYSTEGSRKTAFCAQHATQGMIGVSNKKAYHCANQG
CTKRSSYGIEGSKKAEFCAQHAKQGMINVRCQTCANEGCTKRPSYGIEGS
KKSEFCAQHARQGMVYFVGGKICANQSCNKRATHGQQGSKKTEFCAPHAK
QGMIDVRSKTCANQGCTILPSYGIESSRKREFCAQHAKQGMINVAGSKAC
AYKGCAKRSSYGIQGSKKIEFCSQHAKQGMVNIANKPCAYQGCTKRPSYG
QKGSKKREFCAEHARQGMINIVVNKTCANQGCAIQPSYGIAGSKKREFCA
QHAKQGMINVAGYKPCANEGCITRPSYGIEGTKKAEFCAQHAKQGMIDVV
TKTCAKRGCNKRPSYGIEGSRKREFCPEHARQGMVDVRKEEGTRQVCRTS
PLVNSVEGRQMRVIDVCVEHTEQAGRTREDRVENSGVEKNSSDILSLVNS
RKRPRRNDDPMAPGSVQAGAVRMRRLGRGFSAGLGISATPEDVAIPDVER
TDVALKSTAIGVETATSGGAIEPLFSPESAVTVKVE*
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mRNA from alignment at D-herbacea_M_contig992:26116..30301+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig992.16268.1 ID=mRNA_D-herbacea_M_contig992.16268.1|Name=mRNA_D-herbacea_M_contig992.16268.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=4186bp|location=Sequence derived from alignment at D-herbacea_M_contig992:26116..30301+ (Desmarestia herbacea DmunM male)
GTGCACCAAGAGCACCAAGGACCCCATAACTCCCTTGCACCAAGGACCTC
ATAACTCCCTTGCGAATTTTTGGATTACCACAACTGGCAAAGCTGGAGGA
AAAAGGGGAGAGTAGACGTGCTTCCAAGTGTGGAAATAATCATATATTTG
ACTTTTTTTTTTTTTTTTGTGTGCTGCAACACAGAGACAGGTGGTGACCG
AATCAGTCAGGTGTTGTGTGTGTAAGGCCATCTCGTCCTCTCATATTTCA
CGCATTCGGTAAAACAGGAACTACACGGGGCGATGACTAAGGAGTGCAGC
AACCAGGGCTGCACCAACCATGCGTCATATAGTACAGAAGGCAGCAGGAA
AACGGCGTTCTGCGCCCAGCATGCCACGCAGGGCATGATCGGCGTCAGCA
ACAAGAAGGCATATCATTGCGCCAACCAGGGTTGCACCAAGCGGTCATCG
TACGGCATAGAAGGCAGCAAGAAAGCGGAGTTCTGCGCCCAGCACGCCAA
GCAGGGCATGATCAACGTGCGCTGCCAGACATGCGCCAACGAGGGTTGCA
CCAAGCGGCCATCGTACGGCATAGAAGGCAGCAAGAAATCAGAGTTCTGC
GCCCAGCACGCCAGGCAGGGCATGGTCTACTTTGTTGGCGGCAAGATATG
CGCCAACCAGAGTTGCAACAAGCGAGCAACACACGGCCAACAAGGCAGCA
AGAAAACAGAGTTCTGCGCCCCGCACGCGAAGCAGGGCATGATCGATGTG
CGCAGCAAGACATGCGCCAACCAGGGCTGCACCATTTTGCCGTCATATGG
CATAGAAAGCAGCAGGAAGCGAGAGTTCTGTGCCCAGCACGCCAAGCAGG
GCATGATCAACGTGGCCGGCAGCAAGGCATGCGCCTACAAAGGTTGCGCC
AAGCGGTCATCATACGGAATACAAGGCAGCAAGAAAATAGAGTTTTGCTC
CCAGCACGCCAAGCAGGGTATGGTTAACATCGCCAACAAGCCATGCGCCT
ATCAGGGTTGCACCAAGCGGCCATCATACGGCCAAAAAGGCAGCAAGAAA
CGAGAGTTCTGTGCCGAGCACGCCAGGCAGGGCATGATCAACATTGTCGT
CAACAAGACATGCGCCAACCAGGGCTGCGCCATTCAGCCGTCATACGGTA
TAGCAGGCAGCAAGAAACGAGAGTTCTGCGCCCAGCACGCCAAGCAGGGC
ATGATCAACGTGGCCGGCTACAAGCCATGCGCCAACGAGGGTTGCATCAC
GCGGCCATCGTACGGCATAGAAGGCACCAAGAAAGCAGAATTCTGCGCCC
AGCACGCCAAGCAGGGCATGATCGACGTCGTCACCAAGACATGCGCCAAG
CGGGGTTGCAACAAGCGGCCATCATACGGCATAGAAGGCAGCAGGAAACG
AGAGTTCTGTCCAGAGCACGCCAGGCAGGGCATGGTCGACGTCCGCAAGG
AGGAGGGAACCCGCCAGGTTTGCAGAACATCGCCGTTAGTTAACAGTGTG
GAAGGCCGCCAGATGCGGGTTATTGACGTTTGCGTCGAACATACGGAGCA
GGCGGGTCGCACGCGGGAGGACCGTGTTGAAAATTCTGGCGTGGAGAAAA
ACTCTTCGGATATACTTAGCCTGGTAAATTCGAGAAAGCGACCACGCCGG
AATGACGATCCTATGGCTCCGGGCTCAGTTCAAGCAGGCGCTGTAAGGAT
GCGTAGACTTGGGCGAGGCTTCTCTGCTGGCCTAGGCATATCGGCCACCC
CAGAAGATGTGGCCATCCCAGATGTGGAGCGTACCGATGTGGCATTGAAA
AGTACCGCGATCGGTGTTGAAACGGCGACTTCAGGTGGAGCCATCGAACC
GCTGTTCTCCCCAGAATCAGCAGTGACGGTCAAGGTGGAATAGGCGTCGT
CTCGGCATGATGGCATACCTGCTAATCGCCACAGGTATTTATAGAGCAGG
GTTTTGTATTTCTACGCTATCAGTTCGTTTCAGCAAATTCAGGACGGGGT
TGGCATAAGGTATGCAGTTAGTTGCTTAACCTTGATTACTTTCTCACCAT
GACGCTGCGCTGCTTTCTCGTATGGGCGTGAAAATGTTCGCACTTGGTAC
GGCCTAGAGGGGGTTTGTTTATATTTCGTCGGAACAGTATTACGCCCGAT
TCACGTGACGAAAGACTCTCGTAATAATATATACATCCCTGCCTTGCTAC
CCCGCAGCCGATTAACGGACCCGCAGTCCCTAAAAATTCACACTTTGCGC
GATGTTCACGTGCAACGGAAAGGGGGTTGGGGAGGCGGCTTCGTGTCGAG
CACTCGCCTACTATCGTATGCTTTTGTTCTCCGTTTGAAGTTTGGTATTG
TTTGAGTGGTAAGCGGGGGCGGTTTGTTTGTGTGATTCCGGACCTTATCA
GACATTTCAGTGCCTAGCGCTGTGAAACCTGACTGCCACATTGCAGTGTA
TGTTTACGCTTCTCAACGATGATTGTCCTACATGTACTGTATGTGCACGA
AAGGATTCACCTTCGTGCTGGTAACGTTGTAGTGCATTAGGGAACCGCTG
CATGAGGGAACCACTTTTGACTTTTGCCTTAGGGAGCCGCTGCCTTAGGG
AACCGCTTTCTACTTTTACTTTGGGGAATCGCTGCATTAGGGAAACGTCC
CACTTTGGCATGAGCGAACCGCCGCATTAGGGAAACGCCCCATTTCGACC
TAGAACACGGCTGCAGTGCTACGGGGCTGAATACGCCATATTACCGACTC
GTTGTCCAGTACGACATCGTACACGGATGCTTTTCTCCATATTGAAAATC
ACCACGTACTGATCTTCATGGAGAAATTTATCCGTGTACGATTTCGTACT
GGACATCACTACTGATCTTCATCATGGAGAAAATTTAGTGCGTACGATTT
CGTCCTGGACAGCGCATCGCTGTTGTGGCATCATTATAATCTCGTAGTAG
CGTAGCGGTTTCGAGGTCAACAGTGGAACCGCGTACGATTCCCTACTGGA
TAGCAGAAGTAATGATCTTGATGTTGGAGAACCTCATCCGTGTACGATGT
CGTACTGGACAGCGAATCTGTGATATGGCATAATTGCAACCTCGTAGCAA
TGCAGCCGTTTTCTAGGTCAAAAGTGGAACGTTTCCCTAATGCAGCGGTT
CCCTAATGCAAAAGTGGAATGTTTCCCTAATGCAGCGATTGCCCATCGCA
AAAGTGGAAATCAGTCCCCTCAGGCAGCGGTTCCCTGAGCGAAGTCGAAA
TCGGTTCCCTGATGCACCGTTTCCCTAATGTACTACAACATCATTGCAGG
ACGTGCCCCCTTGCCACTCTCGCATTTTCCTTACCTGCTTGCTGGATTGA
TCCCACGCCTATCCATCGCTGAGCAAAGTGCACTTCTCTGTCTCGCGCCC
AAAATATTACCAGGTATTGTTTTACTGTTTGCAGGCAAACGGTACCGACG
AGGGCACTATTGGCGTCCTCCGGACAAATTTGGGCCATGTCCGCCTGAAA
AGGATTAATGATCTTCTGCAGGTCACTTGTTTTGCATTCTGGAATTTTAT
AAAAGGTGCAGTACACCATAGTGCTGAGGGTAGACAGTCGTAGTATGGCG
GAGAGAGAATATTCCCATAAGGTGCAGCATGTCTGAGAGTTCAACTCACC
TGTAGTCGCGTGCAGCAATATTCAAGGATACGTGTGTGTTGGCTACGGCT
TTCATATTTCGAGAGCACGTGCCGTATCGTGGATAATAATTCCAGCGTGA
TCGAGGTCTTCTACCATGGCGGGTGCTGCGAGACTTGCCAATTGTACATT
TATTTCGCGCTTGTGGCCACCACCTCGGGGGCGAACGAGTGCATGGGGCC
TCGAGTAAGCGTTATCGCTGCCATGCCGTCGGCTCTTTCCAACATAGGTA
ATCTCAGCGTGGCCCTAATTTGTTGACGCTCGGCAGTCACCATGTTCATT
TGGATAAAACGATTACTAGAGCACCCAGCGATGTAGTCTGTAGGACCAGA
ATTCAAGTCCAGTCACTGCTGCAATGCACAGGAGCAAGAAAGACGTACTG
CCTTACCAATGCCTGACATATTGATTTTCGAGACAGCGTTGAGGGATGCG
CAACCCGAATCCACACACATGCTAAGCGATACTGATACAGATACTACGGT
AGTGATAGTCATTGCTATGCTCGCACGGGAATGCCG
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Coding sequence (CDS) from alignment at D-herbacea_M_contig992:26116..30301+

>mRNA_D-herbacea_M_contig992.16268.1 ID=mRNA_D-herbacea_M_contig992.16268.1|Name=mRNA_D-herbacea_M_contig992.16268.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=3222bp|location=Sequence derived from alignment at D-herbacea_M_contig992:26116..30301+ (Desmarestia herbacea DmunM male)
ATGACTAAGGAGTGCAGCAACCAGGGCTGCACCAACCATGCGTCATATAG
TACAGAAGGCAGCAGGAAAACGGCGTTCTGCGCCCAGCATGCCACGCAGG
GCATGATCGGCGTCAGCAACAAGAAGGCATATCATTGCGCCAACCAGGGT
TGCACCAAGCGGTCATCGTACGGCATAGAAGGCAGCAAGAAAGCGGAGTT
CTGCGCCCAGCACGCCAAGCAGGGCATGATCAACGTGCGCTGCCAGACAT
GCGCCAACGAGGGTTGCACCAAGCGGCCATCGTACGGCATAGAAGGCAGC
AAGAAATCAGAGTTCTGCGCCCAGCACGCCAGGCAGGGCATGGTCTACTT
TGTTGGCGGCAAGATATGCGCCAACCAGAGTTGCAACAAGCGAGCAACAC
ACGGCCAACAAGGCAGCAAGAAAACAGAGTTCTGCGCCCCGCACGCGAAG
CAGGGCATGATCGATGTGCGCAGCAAGACATGCGCCAACCAGGGCTGCAC
CATTTTGCCGTCATATGGCATAGAAAGCAGCAGGAAGCGAGAGTTCTGTG
CCCAGCACGCCAAGCAGGGCATGATCAACGTGGCCGGCAGCAAGGCATGC
GCCTACAAAGGTTGCGCCAAGCGGTCATCATACGGAATACAAGGCAGCAA
GAAAATAGAGTTTTGCTCCCAGCACGCCAAGCAGGGTATGGTTAACATCG
CCAACAAGCCATGCGCCTATCAGGGTTGCACCAAGCGGCCATCATACGGC
CAAAAAGGCAGCAAGAAACGAGAGTTCTGTGCCGAGCACGCCAGGCAGGG
CATGATCAACATTGTCGTCAACAAGACATGCGCCAACCAGGGCTGCGCCA
TTCAGCCGTCATACGGTATAGCAGGCAGCAAGAAACGAGAGTTCTGCGCC
CAGCACGCCAAGCAGGGCATGATCAACGTGGCCGGCTACAAGCCATGCGC
CAACGAGGGTTGCATCACGCGGCCATCGTACGGCATAGAAGGCACCAAGA
AAGCAGAATTCTGCGCCCAGCACGCCAAGCAGGGCATGATCGACGTCGTC
ACCAAGACATGCGCCAAGCGGGGTTGCAACAAGCGGCCATCATACGGCAT
AGAAGGCAGCAGGAAACGAGAGTTCTGTCCAGAGCACGCCAGGCAGGGCA
TGGTCGACGTCCGCAAGGAGGAGGGAACCCGCCAGGTTTGCAGAACATCG
CCGTTAGTTAACAGTGTGGAAGGCCGCCAGATGCGGGTTATTGACGTTTG
CGTCGAACATACGGAGCAGGCGGGTCGCACGCGGGAGGACCGTGTTGAAA
ATTCTGGCGTGGAGAAAAACTCTTCGGATATACTTAGCCTGGTAAATTCG
AGAAAGCGACCACGCCGGAATGACGATCCTATGGCTCCGGGCTCAGTTCA
AGCAGGCGCTGTAAGGATGCGTAGACTTGGGCGAGGCTTCTCTGCTGGCC
TAGGCATATCGGCCACCCCAGAAGATGTGGCCATCCCAGATGTGGAGCGT
ACCGATGTGGCATTGAAAAGTACCGCGATCGGTGTTGAAACGGCGACTTC
AGGTGGAGCCATCGAACCGCTGTTCTCCCCAGAATCAGCAGTGACGGTCA
AGGTGGAATAGATGACTAAGGAGTGCAGCAACCAGGGCTGCACCAACCAT
GCGTCATATAGTACAGAAGGCAGCAGGAAAACGGCGTTCTGCGCCCAGCA
TGCCACGCAGGGCATGATCGGCGTCAGCAACAAGAAGGCATATCATTGCG
CCAACCAGGGTTGCACCAAGCGGTCATCGTACGGCATAGAAGGCAGCAAG
AAAGCGGAGTTCTGCGCCCAGCACGCCAAGCAGGGCATGATCAACGTGCG
CTGCCAGACATGCGCCAACGAGGGTTGCACCAAGCGGCCATCGTACGGCA
TAGAAGGCAGCAAGAAATCAGAGTTCTGCGCCCAGCACGCCAGGCAGGGC
ATGGTCTACTTTGTTGGCGGCAAGATATGCGCCAACCAGAGTTGCAACAA
GCGAGCAACACACGGCCAACAAGGCAGCAAGAAAACAGAGTTCTGCGCCC
CGCACGCGAAGCAGGGCATGATCGATGTGCGCAGCAAGACATGCGCCAAC
CAGGGCTGCACCATTTTGCCGTCATATGGCATAGAAAGCAGCAGGAAGCG
AGAGTTCTGTGCCCAGCACGCCAAGCAGGGCATGATCAACGTGGCCGGCA
GCAAGGCATGCGCCTACAAAGGTTGCGCCAAGCGGTCATCATACGGAATA
CAAGGCAGCAAGAAAATAGAGTTTTGCTCCCAGCACGCCAAGCAGGGTAT
GGTTAACATCGCCAACAAGCCATGCGCCTATCAGGGTTGCACCAAGCGGC
CATCATACGGCCAAAAAGGCAGCAAGAAACGAGAGTTCTGTGCCGAGCAC
GCCAGGCAGGGCATGATCAACATTGTCGTCAACAAGACATGCGCCAACCA
GGGCTGCGCCATTCAGCCGTCATACGGTATAGCAGGCAGCAAGAAACGAG
AGTTCTGCGCCCAGCACGCCAAGCAGGGCATGATCAACGTGGCCGGCTAC
AAGCCATGCGCCAACGAGGGTTGCATCACGCGGCCATCGTACGGCATAGA
AGGCACCAAGAAAGCAGAATTCTGCGCCCAGCACGCCAAGCAGGGCATGA
TCGACGTCGTCACCAAGACATGCGCCAAGCGGGGTTGCAACAAGCGGCCA
TCATACGGCATAGAAGGCAGCAGGAAACGAGAGTTCTGTCCAGAGCACGC
CAGGCAGGGCATGGTCGACGTCCGCAAGGAGGAGGGAACCCGCCAGGTTT
GCAGAACATCGCCGTTAGTTAACAGTGTGGAAGGCCGCCAGATGCGGGTT
ATTGACGTTTGCGTCGAACATACGGAGCAGGCGGGTCGCACGCGGGAGGA
CCGTGTTGAAAATTCTGGCGTGGAGAAAAACTCTTCGGATATACTTAGCC
TGGTAAATTCGAGAAAGCGACCACGCCGGAATGACGATCCTATGGCTCCG
GGCTCAGTTCAAGCAGGCGCTGTAAGGATGCGTAGACTTGGGCGAGGCTT
CTCTGCTGGCCTAGGCATATCGGCCACCCCAGAAGATGTGGCCATCCCAG
ATGTGGAGCGTACCGATGTGGCATTGAAAAGTACCGCGATCGGTGTTGAA
ACGGCGACTTCAGGTGGAGCCATCGAACCGCTGTTCTCCCCAGAATCAGC
AGTGACGGTCAAGGTGGAATAG
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