mRNA_D-herbacea_M_contig99.16262.1 (mRNA) Desmarestia herbacea DmunM male
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Overview
Homology
BLAST of mRNA_D-herbacea_M_contig99.16262.1 vs. uniprot
Match: D8LBA3_ECTSI (FTCD_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA3_ECTSI) HSP 1 Score: 379 bits (973), Expect = 2.770e-125 Identity = 182/272 (66.91%), Postives = 227/272 (83.46%), Query Frame = 2
Query: 179 AVIYISEGRDKELLDSFSNAAATTSGSDAGVIREFRDPTYHRTGFTIGGRSPSAIVDASLEISRRALRAIDLRMHEASHPRIGVVDHVSVHSVGPQGTGEVSREVGMAIAKGLAEEEKLPVLLYGDLNNGRGLAEVRRSTPYFGSGDMPKTFEANLGPNQVNPSKGMVTVGCTPFVTNYNILLSTDSKKLAASVTRKIREKDGGLPWVEALTLEREDGRYETACNLLRPRETTPAMVLAVAEEQAAVLGIRIMGDYETGFTEEQAMVAISRL 994
AV+Y+SEGR+ LLD+ + AA TT+ AG+IR+FRDP YHRTGFTIGG P A+ AS+E+SRRA+RAIDL HEA+HPRIGVVDHVSVH +G +G+ E++++ G+AIA L ++ LPVLLYGDLNNGR LAEVRRSTPYF G++P T +A+LGPN+V+ S+G+ TVGCTP VTNYNILLSTD K+LA+ VTR +REKDGGLPWVE+LTL+R+DG +E ACNLLRP+ETT A VLAVAEEQAA +GIR++ YETG T+E+A+ AISRL
Sbjct: 37 AVVYVSEGRNSTLLDALAEAARTTAPGTAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEAAHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQRKDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTDEEALAAISRL 308
BLAST of mRNA_D-herbacea_M_contig99.16262.1 vs. uniprot
Match: A0A4D9D4Y2_9STRA (FTCD_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Y2_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.940e-53 Identity = 108/270 (40.00%), Postives = 158/270 (58.52%), Query Frame = 2
Query: 185 IYISEGRDKELLDSFSNAAATTSGSDAGVIREFRDPTYHRTGFTIGGRSPSAIVDASLEISRRALRAIDLRMH-EASHPRIGVVDHVSVHSVGPQGTGEVSREVGMAIAKGLAEEEKLPVLLYGDLNNGRGLAEVRRSTPYFGSGDMPKTFEANL-----GPNQVNPSKGMVTVGCTPFVTNYNILLSTDSKKLAASVTRKIREKDGGLPWVEALTLEREDGRYETACNLLRPRETTPAMVLAVAEEQAAVLGIRIMGDYETGFTEEQAM 976
+Y+SEGR+ LLD ++ A T+S +++ F D YHR+ FT+GG +P +V+ +L + A +D+ H +A+HPR+GVVDHVS H +G EV+R+ A+ + + + +PVLLYG NN + LA+VRRST YF F+A + GP V+P G++ G P+V N+NI L T K++AA VT+ +R +DGG VEALTL E G E ACNLL T A VL +A + A G+ + Y G T ++ +
Sbjct: 19 VYVSEGRNHALLDRLTHLARTSSPGLCALVQRFSDAVYHRSNFTLGG-APEPVVEVALRVINEAFLHVDMTKHVDATHPRVGVVDHVSFHPLGNTPL-EVARKAACALGQRVGGKWPVPVLLYGSCNN-KSLADVRRSTSYF----KKMAFDAQVPHADYGPVDVDPRLGLLCCGAVPYVQNFNIRLKTSEKQIAAMVTKAVRSRDGGPVGVEALTLRHEGGHMEVACNLLDVDTTDTARVLKLATDAARKAGVEVEEAYTVGMTGDEIL 281
BLAST of mRNA_D-herbacea_M_contig99.16262.1 vs. uniprot
Match: A0A8J9WP56_9CHLO (Probable formimidoyltransferase-cyclodeaminase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WP56_9CHLO) HSP 1 Score: 189 bits (479), Expect = 6.930e-52 Identity = 109/275 (39.64%), Postives = 154/275 (56.00%), Query Frame = 2
Query: 185 IYISEGRDKELLDSFSNAAATTSGSDAGVIREFRDPTYHRTGFTIGGRSPSAIVDASLEISRRALRAIDLRMHEASHPRIGVVDHVSVHSVGPQGTGEVSREVGMAIAKGLAEEE-KLPVLLYGDLN-NGRGLAEVRRSTPYF-GSGD----------MPKTFEANLGPNQVNPSKGMVTVGCTPFVTNYNILLSTDSKKLAASVTRKIREKDGGLPWVEALTLEREDGRYETACNLLRPRETTPAMVLAVAEEQAAVLGIRIMGDYETGFTEEQ 970
+YISEG LL+ A+T +G+ ++ F D Y+RTGFT+ P + ++ ++R AL AIDLR+H ASHPR+GVVDH+S H +G T + E I L E E +PV LYG + N + LA++RR+ YF GS +P + + GP ++PS+G+ TVG PFV NYN+LL TD +L+ + R + + GGLP VEA+ L E G E ACNLL ++P V A ++ A GI + Y TG T E+
Sbjct: 15 VYISEGSKLALLEQLKGVASTDTGT--ALVHTFIDKPYNRTGFTLASPGPQQLARTAVHLARAALAAIDLRLHSASHPRLGVVDHISCHPLGTGATLSSATEAARLIGAQLGEGELAVPVFLYGSAHKNQQSLADIRRACGYFKGSKQGAFHGASGIIIPPGLQPDYGPEHLDPSRGLATVGAVPFVVNYNVLLKTDDMQLSRQIARAVSSRGGGLPSVEAMALPHEGG-VEIACNLLDAATSSPEAVGAAVQQHALKHGIVVGDAYMTGRTPEE 286
BLAST of mRNA_D-herbacea_M_contig99.16262.1 vs. uniprot
Match: A0A7S3XW83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW83_HETAK) HSP 1 Score: 187 bits (476), Expect = 5.210e-51 Identity = 107/272 (39.34%), Postives = 149/272 (54.78%), Query Frame = 2
Query: 185 IYISEGRDKELLDSFSNAAATTSGS--DAGVIREFRDPTYHRTGFTIGGRSPSAIVDASLEISRRALRAIDLRMHEASHPRIGVVDHVSVHSVGPQGTGEVSREVGMAIAKGLAEEEKLPVLLYGDLNNGRGLAEVRRSTPYFGSGDMPKTFEANLGPNQVNPSKGMVTVGCTPFVTNYNILLSTDSKKLAASVTRKIREKDGGLPWVEALTLEREDGRYETACNLLRPRETTPAMVLAVAEEQAAVLG-IRIMGDYETGFTEEQAMVAISR 991
+Y+SEGRD++ ++ A +G D ++ +F DP Y+RT F G S++ E++ A+ +++L HEASHPRIGVVDH+SVH +G T + E I E+ +P+L YG LN G+ L+ VRRST YF G + A+LGP V+P +G + VG P V NYN+ +K ++ R +REKDGGLP VEA+ L G YE ACNLL P VLA A AA G I + Y G T + ++R
Sbjct: 57 LYVSEGRDEQFINELHEMAHNKTGETFDCALVNKFSDPHYNRTSFCFAGHY-SSVSRIIKEVAEVAIESLNLEEHEASHPRIGVVDHISVHPLGE--TMVFAEEAAREIGAYFGTEKGIPILFYGSLN-GKRLSAVRRSTSYF-RGGQDREVAADLGPRAVDPRRGAMCVGAVPPVLNYNVRFRCTDRKAVGAIARALREKDGGLPGVEAVALRHAGGNYEAACNLLEADRVGPEEVLAAATAAAAAQGGIEVDAAYTIGLTAAEVADRLAR 323
BLAST of mRNA_D-herbacea_M_contig99.16262.1 vs. uniprot
Match: A8HWL3_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HWL3_CHLRE) HSP 1 Score: 173 bits (439), Expect = 1.720e-46 Identity = 101/269 (37.55%), Postives = 143/269 (53.16%), Query Frame = 2
Query: 185 IYISEGRDKELLDSFSNAAATTSGSDAGVIREFRDPTYHRTGFTIGGRSPSAIVDASLEISRRALRAIDLRMHEASHPRIGVVDHVSVHSVGPQGTGEVSREVGMAIAKGLAEEEK---LPVLLYGDLN-NGRGLAEVRRSTPYFG-----------------SGDMPKTFEANLGPNQVNPSKGMVTVGCTPFVTNYNILLSTDSKKLAASVTRKIREKDGGLPWVEALTLEREDGRYETACNLLRPRETTPAMVLAVAEEQAAVLGI 928
+YISEGRDK L+ AA T G ++ F+D YHRTGFT+ P + +A + +SR AL+ +DLR H+ASHPR+GVVDH+++H +G + G+A +EE+ LPV YG + + RGLA++RR YF +G+ F +LGP + G+VT+G TP+V NYN+ LS A + + I E+ GGLP V+A+ L+ DG E ACNLL P + A E A G+
Sbjct: 3 VYISEGRDKALIGKLEAAAQATPG--VALVNVFQDEPYHRTGFTLVSGQPDRLTEAVVRLSRAALQLLDLRRHDASHPRLGVVDHIALHPLGGLAPAAATHSRGVATTVAGGQEEEVPALPVYFYGHAHPSRRGLADIRRKLGYFRRSPEGGWRGGLEQQQLPAGNDLSAFPPDLGPATASARWGVVTIGATPWVGNYNVPLSGVDMATARKLAKAISERGGGLPGVQAMALQHADGLVEVACNLLDAAAAPPGTLQARLEGIAGAWGL 269
BLAST of mRNA_D-herbacea_M_contig99.16262.1 vs. uniprot
Match: I0YZZ2_COCSC (Formiminotransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZZ2_COCSC) HSP 1 Score: 169 bits (429), Expect = 1.140e-44 Identity = 104/278 (37.41%), Postives = 148/278 (53.24%), Query Frame = 2
Query: 185 IYISEGRDKELLDSFSNAAATTSGSDAGVIREFRDPTYHRTGFTIGGRSPSAIVDASLEISRRALRAIDLRMHEASHPRIGVVDHVSVHSVGPQGTGEVSREVGMAIAKGLAEEE-KLPVLLYGDLNNG-RGLAEVRRSTPYF---------GSGD--MPKTFEANLGPNQVNPSKGMVTVGCTPFVTNYNILLSTDSKKLAASVTRKIREKDGGLPWVEALTLEREDGRY---ETACNLLRPRETTPAMVLAVAEEQAAVLGIRIMGDYETGFTEEQ 970
+YISEG L+ A S + ++ F D Y+RTGFT+ +P + + + ++R AL IDLR H ASHPR+GVVDH+S H +G + E +I L E E +PV LYG + R LA++RR+ YF G+ + MP + GP++++P +G+ TVG P+V N+NILL TD +LA + R + + GGLP VEA+ L E+G E ACNLL + V A +E A GI + Y TG T E+
Sbjct: 10 VYISEGLRSTLVQQLK-VCADKCISGSALVHTFVDKPYNRTGFTLVSPAPHELAGSVVRLARAALETIDLRSHAASHPRLGVVDHISCHPLGRDAALTAAAETARSIGTQLGEGELAVPVFLYGSAGSQQRSLADLRRACGYFKGSKQGAFKGASEISMPAGMRPDFGPSELDPRRGLATVGALPWVVNFNILLQTDDLQLARQIARAVSGRGGGLPSVEAMALPHEEGEILGIEIACNLLDVAVSPTEAVAASVQEHADRHGITVGRGYMTGKTPEE 286
BLAST of mRNA_D-herbacea_M_contig99.16262.1 vs. uniprot
Match: A0A061R7T0_9CHLO (Formimidoyltransferase-cyclodeaminase-like isoform x1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R7T0_9CHLO) HSP 1 Score: 160 bits (405), Expect = 9.920e-42 Identity = 97/263 (36.88%), Postives = 140/263 (53.23%), Query Frame = 2
Query: 185 IYISEGRDKELLDSFSNAAATTSGSDAGVIREFRDPTYHRTGFTIGGRSPSAIVDASLEISRRALRAIDLRMHEASHPRIGVVDHVSVHSVGPQGTGEVSREVGMAIAKGL-----AEEEKLPVLLYGDLN-NGRGLAEVRRSTPYF---------GSGDMPKTFEANLGPNQVNPSKGMVTVGCTPFVTNYNILLSTDSKKLAASVTRKIREKDGGLPWVEALTLEREDGRYETACNLLRPRETTPAMVLAVAEEQAAVLGI 928
+Y SEG + +LL + + +G ++ +F D Y+R+ FT+ A+ E+++ A+ A+DLR HEASHPR+GVVDH+S H + T + E A+A+ + AE PV LYG + GR LA++RRS YF G+ D +LGP V+P G+V VG + ++TNYNILL+T + R++ E+ GGLP V+A+ L +G E ACNLL T P VL AA GI
Sbjct: 2 VYXSEGXNVKLLKTLEQLVSGRNG--VALVNKFTDTPYNRSSFTLASAGVGEAAVAAAELAKAAICALDLRTHEASHPRLGVVDHISCHPL----TAAAAMEDAAALARSIGSIVXAEPTPAPVFLYGAAHPEGRRLADLRRSFGYFEGSAXSSWSGAIDDRHLLTPDLGPVXVSPRTGIVAVGASKWITNYNILLNTADLVTGRKIAREVSERGGGLPHVQAMALRHAEGAVEVACNLLDHEATPPPAVLERVRSLAAAHGI 258
BLAST of mRNA_D-herbacea_M_contig99.16262.1 vs. uniprot
Match: A0A835PU85_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835PU85_VANPL) HSP 1 Score: 154 bits (389), Expect = 4.660e-39 Identity = 99/293 (33.79%), Postives = 160/293 (54.61%), Query Frame = 2
Query: 185 IYISEGRDKELLDSFSNAAATTSGSDAGVIREFRDPTYHRTGFTIGG----RSPS---AIVDASLEISRRALRAIDLRMHEASHPRIGVVDHVSVHSVGPQGTGEVSREVGMAIAKGLAEEEKLPVLLYGDLNNG-RGLAEVRRSTPYFGSG--DMPKTFEA--NLGPNQVNPSKGMVTVGCTPFVTNYNILLSTDSKKLAASVTRKIREKDGGLPWVEALTLEREDGRYETACNLLRPRETTPAMVLAVAEEQAAVLGIRIMGDYETGFTEEQAMVAISRLGE*YVVVVANE 1027
+YISE R+ L+S AA +A ++ F+D +Y+R G+T+ SP+ A+ +A ++ AL++IDL H SHPR+GVVDH+ H +G +VS + ++A + + ++P LYG + R L +RR YF S + FE + GP+++NP+ G+V VG T +V NYN+ + + ++A + R++ + GGL V+AL L DG E ACNLL P + + + + AAV GIR+ Y T F+EE+ + E Y+ +++NE
Sbjct: 11 MYISESRNALALESIEKAAGMHP--EAIIVNRFKDQSYNRVGYTLVSAFFRESPTQNCALREAVFSMAEAALQSIDLAKHIGSHPRLGVVDHICFHPLGEASLDQVSA-LAKSVAADIGSKLQVPTFLYGAAHEEERALDSIRRELGYFKSNLSFRHEFFEVKPDAGPSRLNPANGVVVVGATRWVQNYNVPIWCTNMEVARRIARRVSGRGGGLETVQALALAHGDGWVEVACNLLDPGKVWADQIQSEIQRMAAVEGIRVGQGYFTDFSEEKIV-------ETYLKLISNE 293
BLAST of mRNA_D-herbacea_M_contig99.16262.1 vs. uniprot
Match: A0A0K9RWM6_SPIOL (Uncharacterized protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RWM6_SPIOL) HSP 1 Score: 151 bits (382), Expect = 6.650e-38 Identity = 99/294 (33.67%), Postives = 148/294 (50.34%), Query Frame = 2
Query: 185 IYISEGRDKELLDSFSNAAATTSGSDAGVIREFRDPTYHRTGFTIGGR-SPSA------IVDASLEISRRALRAIDLRMHEASHPRIGVVDHVSVH---SVGPQGTGEVSREVGMAIAKGLAEEEKLPVLLYGDLNN-GRGLAEVRRSTPYF-----------GSGDMPKTFEANLGPNQVNPSKGMVTVGCTPFVTNYNILLSTDSKKLAASVTRKIREKDGGLPWVEALTLEREDGRYETACNLLRPRETTPAMVLAVAEEQAAVLGIRIMGDYETGFTEEQAMVAISRLGE 1000
+YISE R+ LDS AA D +I +F+D TY+R G+T+ + SP + DA+ + AL+A+D MH SHPR+GVVDH+ H S+ + T ++R +A + + ++P LYG + GR L VRR YF G + GP+QV+PSKG+V +G T +V NYN+ + + +++ + E+ GGLP V+A+ L +G E ACNLL P + V A E A G+ Y T F++EQ + A G+
Sbjct: 11 LYISESRNTAALDSIERAAKIFH--DTKIINKFKDETYNRVGYTLVSKLSPKLSSDVFPLKDAAFAMVSSALKAVDYNMHSGSHPRLGVVDHICFHPLASISLEQTANIAR----FLATDIGTKLEVPSFLYGAAHEKGRTLDSVRRELGYFKPNTQGNIWAGGPDSETLPLHPDEGPSQVDPSKGVVVIGSTRWVDNYNVPIFSTDLSAVRKISKLVSERGGGLPSVQAMALTHGEGVIEVACNLLEPSKVGGDQVQAEVERLAREAGMVAGKGYFTDFSQEQIINAFLESGD 298
BLAST of mRNA_D-herbacea_M_contig99.16262.1 vs. uniprot
Match: UPI0009005AB3 (formimidoyltransferase-cyclodeaminase isoform X1 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI0009005AB3) HSP 1 Score: 152 bits (383), Expect = 8.170e-38 Identity = 96/286 (33.57%), Postives = 146/286 (51.05%), Query Frame = 2
Query: 185 IYISEGRDKELLDSFSNAAATTSGSDAGVIREFRDPTYHRTGFTIGGRSPSAIV-------DASLEISRRALRAIDLRMHEASHPRIGVVDHVSVHSVGPQGTGEVSREVGMAIAKGLAEEEKLPVLLYGDLNN-GRGLAEVRRSTPYFGSGDMPKTFEANL----------------GPNQVNPSKGMVTVGCTPFVTNYNILLSTDSKKLAASVTRKIREKDGGLPWVEALTLEREDGRYETACNLLRPRETTPAMVLAVAEEQAAVLGIRIMGDYETGFTEEQ 970
+YISE R+K L+S AA +A +I +F D TY+R G+T+ + P + DA + A +AID +H SHPR+GVVDH+ +H + T E + + ++A+ + + ++PV LYG + GR L +RR YF MP T + N+ GP+QV+PSKG++ +G T +V NYN+ + + + + + I E+ GGLP V+A+ L DG E ACNLL P + V E A G+ Y T T+E+
Sbjct: 38 LYISESRNKAALESIERAAKLFH--EAKLINKFEDETYNRVGYTLVSKLPPKLPSGFFPLKDAPFAMVESAYKAIDFNVHSGSHPRLGVVDHICLHPLA-NATSEQTANIARSLARDIGTKLEVPVFLYGAAHEKGRTLDSIRRELGYF----MPNT-QGNIWAGGPNSENLPICPDEGPSQVDPSKGVIVIGSTRWVDNYNVPIFSTNISAVRRIAKVIGERGGGLPSVQAMALAHGDGTVEVACNLLDPSKVGGDKVQVEVERLAREEGMVAGKGYFTDLTQEE 315 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig99.16262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_M_contig99.16262.1 >prot_D-herbacea_M_contig99.16262.1 ID=prot_D-herbacea_M_contig99.16262.1|Name=mRNA_D-herbacea_M_contig99.16262.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=316bp MLRRCVQLATTTPTSSPVFVFVKNTTTTIARRSCCSSSYCCAVIYISEGRback to top mRNA from alignment at D-herbacea_M_contig99:993638..997908+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_M_contig99.16262.1 ID=mRNA_D-herbacea_M_contig99.16262.1|Name=mRNA_D-herbacea_M_contig99.16262.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=4271bp|location=Sequence derived from alignment at D-herbacea_M_contig99:993638..997908+ (Desmarestia herbacea DmunM male)back to top Coding sequence (CDS) from alignment at D-herbacea_M_contig99:993638..997908+ >mRNA_D-herbacea_M_contig99.16262.1 ID=mRNA_D-herbacea_M_contig99.16262.1|Name=mRNA_D-herbacea_M_contig99.16262.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1896bp|location=Sequence derived from alignment at D-herbacea_M_contig99:993638..997908+ (Desmarestia herbacea DmunM male)back to top |