mRNA_D-herbacea_M_contig97.16094.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig97.16094.1
Unique NamemRNA_D-herbacea_M_contig97.16094.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig97.16094.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig97contigD-herbacea_M_contig97:117512..118903 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score113.2
Seed ortholog evalue7.1e-23
Seed eggNOG ortholog2880.D7FLR4
KEGG koko:K01280
Hectar predicted targeting categoryother localisation
EggNOG free text desc.sulfuric ester hydrolase activity
EggNOG OGsCOG3119@1,KOG3867@2759
EC3.4.14.10
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03110
Exons2
Model size349
Cds size309
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig97.16094.1prot_D-herbacea_M_contig97.16094.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig97 117526..118877 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935794.3494532-UTR-D-herbacea_M_contig97:117511..1175251622935794.3494532-UTR-D-herbacea_M_contig97:117511..117525Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig97 117512..117525 +
1690880706.94999-UTR-D-herbacea_M_contig97:117511..1175251690880706.94999-UTR-D-herbacea_M_contig97:117511..117525Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig97 117512..117525 +
1622935794.3927944-UTR-D-herbacea_M_contig97:118877..1189031622935794.3927944-UTR-D-herbacea_M_contig97:118877..118903Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig97 118878..118903 +
1690880706.9838502-UTR-D-herbacea_M_contig97:118877..1189031690880706.9838502-UTR-D-herbacea_M_contig97:118877..118903Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig97 118878..118903 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935794.3618128-CDS-D-herbacea_M_contig97:117525..1176781622935794.3618128-CDS-D-herbacea_M_contig97:117525..117678Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig97 117526..117678 +
1690880706.9634023-CDS-D-herbacea_M_contig97:117525..1176781690880706.9634023-CDS-D-herbacea_M_contig97:117525..117678Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig97 117526..117678 +
1622935794.37914-CDS-D-herbacea_M_contig97:118721..1188771622935794.37914-CDS-D-herbacea_M_contig97:118721..118877Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig97 118722..118877 +
1690880706.973953-CDS-D-herbacea_M_contig97:118721..1188771690880706.973953-CDS-D-herbacea_M_contig97:118721..118877Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig97 118722..118877 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig97.16094.1

>prot_D-herbacea_M_contig97.16094.1 ID=prot_D-herbacea_M_contig97.16094.1|Name=mRNA_D-herbacea_M_contig97.16094.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=103bp
MDASVACGNVSECQDCYDGCASDTAYLFGDRLVNLGEDPREENNLIFEYP
EIASMLRARAEEIVFSEWTSSNYKEINVDSYQVWRAHDWWMVPWVDYLSP
ES*
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mRNA from alignment at D-herbacea_M_contig97:117512..118903+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig97.16094.1 ID=mRNA_D-herbacea_M_contig97.16094.1|Name=mRNA_D-herbacea_M_contig97.16094.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=1392bp|location=Sequence derived from alignment at D-herbacea_M_contig97:117512..118903+ (Desmarestia herbacea DmunM male)
AGACGGATCCTCATATGGACGCTTCCGTCGCGTGCGGTAACGTCTCCGAG
TGTCAAGACTGCTACGATGGTTGCGCAAGCGACACCGCGTATCTTTTCGG
CGATCGTCTCGTCAACCTGGGTGAAGACCCTCGAGAAGAGAACAACCTCA
TCTTCGAATATCCCGAGGTGCACAGCCATGATTACTCGTTTTTGCGTGAC
CGTCGGTTTGATTTTTTCTGTAGGGAAGGCGAGGCCTCTGTGTCCCTACA
ACGCCGGGGTGGACGGTACGACAATGCCTAAATGATGCAAAATATCCTGT
GTTAGATTTATTGCAGTTCTCGTTCGTGTACTCCCTTTGTCCCGAAGCCC
ATCATGACTATACCGCTTGCACACATACCTGGGAAGGAAGACGGGCAGAG
ATCTGTGACTACCGCTTGAACAGAACACCGCGCCGAGCGGTGAGCTCGTG
TGAGCTGGTGGACTGGGAAGTTACAAAATGAAGGATAATGGTTTGCTATA
TAATGTCGCATTTGGAAACCTGCTGTTGCTGCGTTGGAACTCCCATTTGT
TTGTTTGTTTGTTTGTCTTTAACGTAACTCGACCGGCATCCTCATCTTCT
GCCTCATTGCATTAGCTTGCTCTAACACTCTACTGCCTCGTCGATCGTCG
AACGCTTCCATCGATCGGTCGCTCCGAGGACTTGCTCTTTATTTAGTTGC
AGCCCCCGCAAAAGCGACAGAGGTCCTGTCCAGGACGCCATGTAGCGCAG
ACTGTGTCGATTTATGAGGGGGAAAGGGTGCCATTATGGGAGGAAACAGC
TAGTTGCAGCAAACCGCCCGCCGACGGCTAGTGTTCGGCGGGCATCTTGT
TCACATTCATGTTTCGTACAATGCTTCCTTGTATGTGCTGTAGCTCCCAG
CTCTCCTCCGTGTCGCAAGAAGAAGAGTTGATAACAATCAATCGTTCCCT
CTCCATGGTCCCAGTCCCTGCTGGGATTTTTGTAGTACATGGGGCGGTCA
GGGAGCTATTGAATATAGTGTTTTAGATCGTTACCGAGGCTTTAACCTGC
GCTTGAATGGGTCTCCCCTGTCTTTGTCGACAATCGACAGCTTGCCTTGC
GTCGCGTTCTAAAATTCGACGAAAGCCCGAATTTTGTTTTATCTCTTTTT
TTTTGGTGGCATTTTGTAACCAACTCCAGCCCCGTCAATCCTCCCCGATC
TTGCACACAGATTGCGTCGATGCTGAGAGCACGAGCAGAGGAAATAGTGT
TCTCAGAGTGGACGTCGTCGAACTACAAGGAGATCAACGTAGACAGCTAC
CAAGTCTGGAGAGCGCACGATTGGTGGATGGTGCCGTGGGTAGACTACTT
GTCTCCAGAATCGTAGCCTGTGTCGTAGGGCTGGGACCGGGG
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Coding sequence (CDS) from alignment at D-herbacea_M_contig97:117512..118903+

>mRNA_D-herbacea_M_contig97.16094.1 ID=mRNA_D-herbacea_M_contig97.16094.1|Name=mRNA_D-herbacea_M_contig97.16094.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=618bp|location=Sequence derived from alignment at D-herbacea_M_contig97:117512..118903+ (Desmarestia herbacea DmunM male)
ATGGACGCTTCCGTCGCGTGCGGTAACGTCTCCGAGTGTCAAGACTGCTA
CGATGGTTGCGCAAGCGACACCGCGTATCTTTTCGGCGATCGTCTCGTCA
ACCTGGGTGAAGACCCTCGAGAAGAGAACAACCTCATCTTCGAATATCCC
GAGATGGACGCTTCCGTCGCGTGCGGTAACGTCTCCGAGTGTCAAGACTG
CTACGATGGTTGCGCAAGCGACACCGCGTATCTTTTCGGCGATCGTCTCG
TCAACCTGGGTGAAGACCCTCGAGAAGAGAACAACCTCATCTTCGAATAT
CCCGAGATTGCGTCGATGCTGAGAGCACGAGCAGAGGAAATAGTGTTCTC
AGAGTGGACGTCGTCGAACTACAAGGAGATCAACGTAGACAGCTACCAAG
TCTGGAGAGCGCACGATTGGTGGATGGTGCCGTGGGTAGACTACTTGTCT
CCAGAATCGTAGATTGCGTCGATGCTGAGAGCACGAGCAGAGGAAATAGT
GTTCTCAGAGTGGACGTCGTCGAACTACAAGGAGATCAACGTAGACAGCT
ACCAAGTCTGGAGAGCGCACGATTGGTGGATGGTGCCGTGGGTAGACTAC
TTGTCTCCAGAATCGTAG
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