mRNA_D-herbacea_M_contig96.16037.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig96.16037.1
Unique NamemRNA_D-herbacea_M_contig96.16037.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig96.16037.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig96contigD-herbacea_M_contig96:199639..200679 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size507
Cds size504
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935780.0722203-CDS-D-herbacea_M_contig96:199639..1998341622935780.0722203-CDS-D-herbacea_M_contig96:199639..199834Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 199640..199834 -
1690880701.1007547-CDS-D-herbacea_M_contig96:199639..1998341690880701.1007547-CDS-D-herbacea_M_contig96:199639..199834Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 199640..199834 -
1622935780.092948-CDS-D-herbacea_M_contig96:200370..2006791622935780.092948-CDS-D-herbacea_M_contig96:200370..200679Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 200371..200679 -
1690880701.1111183-CDS-D-herbacea_M_contig96:200370..2006791690880701.1111183-CDS-D-herbacea_M_contig96:200370..200679Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 200371..200679 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig96.16037.1prot_D-herbacea_M_contig96.16037.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig96 199640..200679 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig96.16037.1

>prot_D-herbacea_M_contig96.16037.1 ID=prot_D-herbacea_M_contig96.16037.1|Name=mRNA_D-herbacea_M_contig96.16037.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=168bp
LSTCVCVREGGRTEKGKVFDLGRLEVNERHRVSVELKSIYIDAKVAPRGG
REGGGSSHQISAVVVDVMKRETDGAAGTPQPNNKTASRRTKKSAAGPAGE
SDQRREGKTRSASTPSVAAVSTGGIVAPNTIKDYYALPLGGVVQHSSSSS
SRGGSNDGCCGGVGVGAE
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mRNA from alignment at D-herbacea_M_contig96:199639..200679-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig96.16037.1 ID=mRNA_D-herbacea_M_contig96.16037.1|Name=mRNA_D-herbacea_M_contig96.16037.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=1041bp|location=Sequence derived from alignment at D-herbacea_M_contig96:199639..200679- (Desmarestia herbacea DmunM male)
CTAAGTACGTGTGTTTGTGTGAGAGAGGGAGGGAGAACAGAGAAAGGGAA
AGTGTTTGATTTGGGAAGATTGGAAGTGAACGAGAGACACCGAGTAAGCG
TAGAACTGAAATCGATTTATATCGACGCAAAGGTGGCGCCGAGAGGGGGC
CGAGAGGGTGGGGGGAGTAGTCACCAAATCTCGGCAGTAGTAGTAGATGT
TATGAAGAGGGAGACAGACGGGGCTGCAGGAACGCCACAACCCAACAATA
AGACGGCCTCGCGCAGGACTAAGAAGAGCGCCGCGGGACCTGCTGGAGAG
AGCGACCAGGTACGCCTCGTAATTTTGTTTCGCTCTGGTTGCTAGACTGC
CTTGACGAGGAATCGATCGAAAAAAAGAATCGACATCAAATCCGGGCTGA
TGTAAACAAAAATTAGCATCCTTGACATCTAACATCTATCTATCTGTCTG
TTGATTTCGAAACTGCTTCTTTCCATCGCATTTCAGCGCACATGGCGAGC
GCTTTATCAGAAGTAGCAGCAGACACTATCTATGCTCGCCCAAGCTCCCC
AGCGACCGCACTTCCACGCAGCATCCCCCTCCCCCAAGCTTTTGCTTCCG
TGAGATCATTTTCCACGTCTATCCCGCTCTCTAAAAAGGCCCACAGCAAG
TTACGCAAAATACGGTGGACTCTATATCTAGGATAGTCTTTTTCTGACCC
GCAACCAACGTAAAACAACAAGCAAGCGCGTCTTATTATCCTATTAAGTG
AGTGATAAGGATTCCTTCGCCCCCCGCCCTCCCTCGCCCGCGCCCCGGCC
CCGCATGTCCCCAACACACCACACCCGCCCGACACACCCACCCAGCGTCG
AGAGGGAAAAACCCGATCAGCATCCACTCCTTCTGTTGCCGCCGTGAGCA
CGGGAGGAATCGTGGCGCCAAATACCATTAAAGACTATTATGCCTTGCCA
TTAGGCGGGGTGGTGCAACACTCCTCTTCCTCCTCCTCACGAGGGGGATC
GAACGATGGTTGTTGCGGCGGGGTTGGAGTCGGAGCCGAAG
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Coding sequence (CDS) from alignment at D-herbacea_M_contig96:199639..200679-

>mRNA_D-herbacea_M_contig96.16037.1 ID=mRNA_D-herbacea_M_contig96.16037.1|Name=mRNA_D-herbacea_M_contig96.16037.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1008bp|location=Sequence derived from alignment at D-herbacea_M_contig96:199639..200679- (Desmarestia herbacea DmunM male)
CTAAGTACGTGTGTTTGTGTGAGAGAGGGAGGGAGAACAGAGAAAGGGAA
AGTGTTTGATTTGGGAAGATTGGAAGTGAACGAGAGACACCGAGTAAGCG
TAGAACTGAAATCGATTTATATCGACGCAAAGGTGGCGCCGAGAGGGGGC
CGAGAGGGTGGGGGGAGTAGTCACCAAATCTCGGCAGTAGTAGTAGATGT
TATGAAGAGGGAGACAGACGGGGCTGCAGGAACGCCACAACCCAACAATA
AGACGGCCTCGCGCAGGACTAAGAAGAGCGCCGCGGGACCTGCTGGAGAG
AGCGACCAGCTAAGTACGTGTGTTTGTGTGAGAGAGGGAGGGAGAACAGA
GAAAGGGAAAGTGTTTGATTTGGGAAGATTGGAAGTGAACGAGAGACACC
GAGTAAGCGTAGAACTGAAATCGATTTATATCGACGCAAAGGTGGCGCCG
AGAGGGGGCCGAGAGGGTGGGGGGAGTAGTCACCAAATCTCGGCAGTAGT
AGTAGATGTTATGAAGAGGGAGACAGACGGGGCTGCAGGAACGCCACAAC
CCAACAATAAGACGGCCTCGCGCAGGACTAAGAAGAGCGCCGCGGGACCT
GCTGGAGAGAGCGACCAGCGTCGAGAGGGAAAAACCCGATCAGCATCCAC
TCCTTCTGTTGCCGCCGTGAGCACGGGAGGAATCGTGGCGCCAAATACCA
TTAAAGACTATTATGCCTTGCCATTAGGCGGGGTGGTGCAACACTCCTCT
TCCTCCTCCTCACGAGGGGGATCGAACGATGGTTGTTGCGGCGGGGTTGG
AGTCGGAGCCGAACGTCGAGAGGGAAAAACCCGATCAGCATCCACTCCTT
CTGTTGCCGCCGTGAGCACGGGAGGAATCGTGGCGCCAAATACCATTAAA
GACTATTATGCCTTGCCATTAGGCGGGGTGGTGCAACACTCCTCTTCCTC
CTCCTCACGAGGGGGATCGAACGATGGTTGTTGCGGCGGGGTTGGAGTCG
GAGCCGAA
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