mRNA_D-herbacea_M_contig96.16030.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig96.16030.1
Unique NamemRNA_D-herbacea_M_contig96.16030.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
BLAST of mRNA_D-herbacea_M_contig96.16030.1 vs. uniprot
Match: D8LIV8_ECTSI (Cir_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIV8_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 8.220e-94
Identity = 175/236 (74.15%), Postives = 193/236 (81.78%), Query Frame = 3
Query:   75 HPATTWNQKKIWEAEQKDAKRKKDEASANKELKRDADRKRYEHMAGGGGEPDPSTSALNFMYNPPPGFQQPEEEELNDEDDAVKKFKALAKMKKDPNFSAAASCSELEKLVGRKINPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECKVTENPNDTERRLREDPMSHMTSAXXXXXXXXXXXXXXXXPPGDSAEVNGDPDSAFLSSLS 782
            HPATTWNQKKIWEAEQ D K+KKDEASANKELKRD+DR+ YE++AGG  + D S +ALNFMYNPP               +AVKKFKALAKMK DPNFSAA   SELEKLVGR++NPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDREC V ENP+D ER+ REDPMS+M + XXXXXXXXXXXXXXXX        + DPDS +++SLS
Sbjct:   43 HPATTWNQKKIWEAEQADLKQKKDEASANKELKRDSDRRFYENLAGGKPQ-DASAAALNFMYNPPXXXXXXXXXXXXXXXEAVKKFKALAKMKADPNFSAATQSSELEKLVGRRVNPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECSVDENPHDAERQKREDPMSYMAAXXXXXXXXXXXXXXXXX------XXSVDPDSEYVNSLS 271          
BLAST of mRNA_D-herbacea_M_contig96.16030.1 vs. uniprot
Match: A0A8K1C5M5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5M5_PYTOL)

HSP 1 Score: 181 bits (459), Expect = 7.060e-49
Identity = 111/283 (39.22%), Postives = 163/283 (57.60%), Query Frame = 3
Query:   39 IMSLSFLFCKPWHPATTWNQKKIWEAEQKDAKRKKDEASANKELKRDADRKRYEHMAGGGGEPDPSTSA----LNFMYNPPPGFQQPEEEELNDE--DDAVKKFKALAKMK-----KDPNFSAAASCSELEKLVGRKINPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECKVTE-NPNDTERRLREDPMSHMTSAXXXXXXXXXXXXXXXXPPGD-----------SAEVNGDPDSAFLSSLSTKEKRRLLRRLQ 818
            +  + FL  K WHP+   NQK+IW AEQ    R++ E  A  E++++A+ +R++ +A   G+ + +       + FMY PPPG Q+ EE  + DE  DDAV++F+   + K     +DP  +       LE+ VGR+ +  +++ EQ ERFPFLKDAPVE  Y + VKVNFKP    +R+VRC+RCG+WGH+SGDREC + + NP D  R+ REDPM+ M                     G+           S E + DP+ AFL+ LS++EKR LL++L+
Sbjct:    1 MAGIKFLNLKGWHPSNARNQKRIWIAEQTAKAREQQEQEAAAEVRKNAEIQRFQELAAARGDVESARRVAQQQVGFMYAPPPGLQKVEETTVQDEAEDDAVREFRRKMEKKTGSTQEDPRDTQRT----LERYVGRRPDEPLTIKEQVERFPFLKDAPVEGNYTSSVKVNFKPMGRQLRNVRCLRCGQWGHQSGDRECAMRDQNPLDAARQAREDPMTFMAQLKKQELVLRKAALPLEMQ-GEAGKAQEYDIILSEEEDADPEKAFLAKLSSREKRSLLKKLR 278          
BLAST of mRNA_D-herbacea_M_contig96.16030.1 vs. uniprot
Match: A0A1V9YC20_9STRA (Cir_N domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YC20_9STRA)

HSP 1 Score: 177 bits (448), Expect = 2.410e-48
Identity = 108/273 (39.56%), Postives = 158/273 (57.88%), Query Frame = 3
Query:   48 LSFLFCKPWHPATTWNQKKIWEAEQKDAKRKKDEASANKELKRDADRKRYEHMAGGGGEPDP----STSALNFMYNPPPGFQQPEEEE-LNDEDDAVKKFKALAKMKKDPNFSAAASCSELEKLVGRKINPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECKVTE-NPNDTERRLREDPM----------SHMTSAXXXXXXXXXXXXXXXXPPGDSAEVNGDPDSAFLSSLSTKEKRRLLRRLQ 818
            + FL  K WHP+   NQK+IW AEQK   +++ E  A  E+K+DA+  RY+ +A   G+ D      +  ++F+Y PPPG Q+ +E     + D+AV+ F+   + KK  +  A  S   LE+ VGR+ +  VS+ EQ ERFP LKDAPVE  Y + ++VNF+P    +R+V+C+RCGEWGH+SGDREC + E NP D  R+  EDPM          + +                    P D  +   DP+ A+L+SLS+KEK+RLL++L+
Sbjct:    5 MKFLNLKGWHPSNKTNQKRIWIAEQKAKAKEQAEKDAAAEIKKDAELLRYQQIAASKGDSDAYKRMDSQKVSFLYQPPPGLQKIDETAGAGEADEAVQAFRERFE-KKAASKEAVKSQRALERYVGRRPSEAVSIKEQVERFPMLKDAPVEGDYTSNIRVNFQPVGVRLRNVKCIRCGEWGHQSGDRECNLREFNPLDAARQAMEDPMQLINKINARKNDLVMKKLPLEMQTELSGDFDILPSDDDDA-ADPERAYLASLSSKEKKRLLKKLK 275          
BLAST of mRNA_D-herbacea_M_contig96.16030.1 vs. uniprot
Match: A0A024GR32_9STRA (Cir_N domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GR32_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.250e-47
Identity = 111/278 (39.93%), Postives = 157/278 (56.47%), Query Frame = 3
Query:   48 LSFLFCKPWHPATTWNQKKIWEAEQKDAKRKKDEASANKELKRDADRKRYEHMAGGGGEPDPSTS----ALNFMYNPPPGFQQPEEEELND--EDDAVKKFKALA--KMKKDPNFSAAASCSELEKLVGRKINPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECKVTE-NPNDTERRLREDPMSHMTS-------------AXXXXXXXXXXXXXXXXPPGDSAEVNGDPDSAFLSSLSTKEKRRLLRRL 815
            L FL  K WHP+   NQK+IW AEQK+  +++ E  A  EL+++A+  R++ +A   G+    T     ++ FMY PPPG Q+ ++   +D  EDDAV++F+     K K   N  A  +  +LE+ VGR+ +  +++ EQ ERFPFLKDAPVE  Y   VKVNFKP    +R+VRC+RCGEWGH SGDREC++   NP+D  R+  EDP S+M               A                      + + D +SAFL  L+TKEK+ LL++L
Sbjct:    5 LKFLNLKGWHPSNKANQKRIWIAEQKEKAKEEREKEAASELRKNAELYRFQKIAAAKGDERSVTQLASQSVEFMYAPPPGLQKIDKSVESDMREDDAVREFRRRMEKKTKTHKNEQAKKTQRKLERYVGRRPDESLTIDEQVERFPFLKDAPVEGDYTGNVKVNFKPMGVQLRNVRCLRCGEWGHLSGDRECELRNFNPHDAARQALEDPFSYMNKMTQVNKQELVLRRAAIPFEMQTEHISKDYELISSEDDSDCDSESAFLQKLTTKEKKMLLKKL 282          
BLAST of mRNA_D-herbacea_M_contig96.16030.1 vs. uniprot
Match: A0A485LG33_9STRA (Aste57867_20626 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LG33_9STRA)

HSP 1 Score: 174 bits (440), Expect = 6.080e-47
Identity = 103/269 (38.29%), Postives = 153/269 (56.88%), Query Frame = 3
Query:   48 LSFLFCKPWHPATTWNQKKIWEAEQKDAKRKKDEASANKELKRDADRKRYEHMAGGGGEPDPS----TSALNFMYNPPPGFQQPEEEELNDEDDAVKKFKALAKMKKDPNFSAAASCSELEKLVGRKINPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECKVTE-NPNDTERRLREDPMSHMTSAXXXXXXXXXXXXXXXXP--PGDSAEV-----NGDPDSAFLSSLSTKEKRRLLRRLQ 818
            L FL  K WHP+   NQKKIW AEQK   +++ E  A +E+ +D +  R++ +A   G+ D +    T  +NF+Y PPPG ++ +E+         +  +A  +  +     +A+    LEK VGR+ N  V++++Q ERFP LKDAPVE  Y + +KVNF+P    +R+VRC RC  WGH+SGDREC++ + NPND  R+  EDPMS++                       GD   +     + DP+  FL+SLSTKEK+ LL++L+
Sbjct:   40 LKFLNLKGWHPSNKQNQKKIWIAEQKAKNKEQSEKDAAREVHKDNELMRFQQVAASKGDTDAARRMDTQKVNFLYQPPPGLKKVDEKRAXXXXXXXEAVRAFRQKIEKKTKGSASFQRPLEKYVGRRPNEPVTISDQVERFPMLKDAPVEGEYTSNIKVNFQPVGMRLRNVRCARCQVWGHQSGDRECEMRDQNPNDAFRQTIEDPMSYINQGRKNDLSLKKTALPLEMARDTGDYEMIPTDDDDSDPERKFLASLSTKEKKALLKKLK 308          
BLAST of mRNA_D-herbacea_M_contig96.16030.1 vs. uniprot
Match: W4GLN7_9STRA (Cir_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLN7_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.940e-46
Identity = 106/269 (39.41%), Postives = 152/269 (56.51%), Query Frame = 3
Query:   48 LSFLFCKPWHPATTWNQKKIWEAEQKDAKRKKDEASANKELKRDADRKRYEHMAGGGGEPDPS----TSALNFMYNPPPGFQQPEE------EELNDEDDAVKKFKALAKMKKDPNFSAAASCSELEKLVGRKINPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECKVTE-NPNDTERRLREDPMSHMTSAXXXXXXXXXXXXXXXXPPGDSAEV---------NGDPDSAFLSSLSTKEK 794
            L FL  K WHP+   NQKKIW AEQ+   +++ E  A +E+ +D +  R++ +A   G+ D S    +  ++F+Y PPPG ++ ++      +EL +EDDAVK F+ L   KK+      +    LEKL+GR+ N  V++ +Q ERFP LKDAPVE  Y   +KVNF+P    +R+VRC RC  WGH+SGDREC++ + NPND  R+  EDPMS +                      D+ E          + DP+  +L+SLSTKEK
Sbjct:    5 LKFLNLKGWHPSNKQNQKKIWIAEQRHKAKEESEKDAAREVLKDNELLRFQQVAATRGDVDASRRIDSQKVSFLYQPPPGLKKVDDKRGGDTDELENEDDAVKAFR-LKMEKKNAGKDHQSYQRPLEKLIGRRANDPVTIKDQVERFPMLKDAPVEGEYTQNIKVNFQPVGMKLRNVRCARCQVWGHQSGDRECEMRDQNPNDAFRQNIEDPMSSINQMRQSNLTLKKSAMPLEMQSRDATEYAMVPTDEDESDDPERKYLASLSTKEK 272          
BLAST of mRNA_D-herbacea_M_contig96.16030.1 vs. uniprot
Match: K3X636_GLOUD (Cir_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X636_GLOUD)

HSP 1 Score: 170 bits (431), Expect = 8.230e-45
Identity = 97/219 (44.29%), Postives = 137/219 (62.56%), Query Frame = 3
Query:   42 MSLSFLFCKPWHPATTWNQKKIWEAEQKDAKRKKDEASANKELKRDADRKRYEHMAGGGGEPDPST----SALNFMYNPPPGFQQPEEEELND--EDDAVKKFKALAKMKK-----DPNFSAAASCSELEKLVGRKINPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECKVTE-NPNDTERRLREDPMSHM 662
            MSL FL  K WHP+   NQK+IW AEQK   +++ E  A  E+++ AD +R++ +A   G+ + +       + FMY PPPG Q+ +E    D  EDDAV++F+   + K+     DP  +       LE+ VGR+ +  +++  Q ERFPFLKDAPVE  Y   VKVNFKP    +R+V+C+RCGEWGH+SGDREC + + NP+D  R+  EDPMS+M
Sbjct:    1 MSLKFLNMKGWHPSNKTNQKRIWIAEQKAKDKEQREKEAASEVRKSADLQRFQQLAAAKGDQEAAKRMEMQQVGFMYAPPPGLQKVDESAERDMTEDDAVREFRMKMEKKRGNVVDDPRENQR----NLERYVGRRPDENLTIKTQVERFPFLKDAPVEGEYTDSVKVNFKPVGVQLRNVKCIRCGEWGHQSGDRECSLRDFNPHDAARQAMEDPMSYM 215          
BLAST of mRNA_D-herbacea_M_contig96.16030.1 vs. uniprot
Match: A0A397DVK8_9STRA (Cir_N domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DVK8_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.010e-44
Identity = 101/268 (37.69%), Postives = 149/268 (55.60%), Query Frame = 3
Query:   48 LSFLFCKPWHPATTWNQKKIWEAEQKDAKRKKDEASANKELKRDADRKRYEHMAGGGGEPDPS----TSALNFMYNPPPGFQQPEE------EELNDEDDAVKKFKALAKMKKDPNFSAAASCSELEKLVGRKINPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECKVTE-NPNDTERRLREDPMSHMTSAXXXXXXXXXXXXXXXXPPGDSAEVNGDPDSAFLSSLSTKEKRRLLRRLQ 818
            L FL  K WHP+   NQKKIW AEQ+   +++ E  A +E+ +D +  R++ +A   G+ D S    +  ++F+Y PPPG ++ ++      +EL +EDDAVK F+ L   KK+      +    LEKL+GR+ N  V++ +Q ERFP LKDAPVE  Y   +KVNF+P    +R+VRC RC  WGH+SGDREC++ + NPND                                        + DP+  +L+SLSTKEK++LL++L+
Sbjct:    5 LKFLNLKGWHPSNKQNQKKIWIAEQRHKAKEESEKDAAREVLKDNELLRFQQVAATRGDVDASRRIDSQKVSFLYQPPPGLKKVDDKRGGNTDELENEDDAVKAFR-LKMEKKNAGKDHQSYQRPLEKLIGRRANDPVTIKDQVERFPMLKDAPVEGEYTQNIKVNFQPVGMKLRNVRCARCQVWGHQSGDRECEMRDQNPNDE---------------------------------------SDDPERKYLASLSTKEKKQLLKKLK 232          
BLAST of mRNA_D-herbacea_M_contig96.16030.1 vs. uniprot
Match: A0A1W0A6W9_9STRA (Cir_N domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6W9_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.040e-44
Identity = 110/288 (38.19%), Postives = 160/288 (55.56%), Query Frame = 3
Query:   48 LSFLFCKPWHPATTWNQKKIWEAEQKDAKRKKDEASANKELKRDADRKRYEHMAGGGGEPDPS----TSALNFMYNPPPGFQQPEEEELNDEDD-AVKKFKALAKMKKDPNFSAAASCSELEKLVGRKINPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECKVTE-NP--------------NDTERRLREDPM---SHMTSAXXXXXXXXXXXXXXXXP--------PGDSAEVNGDPDSAFLSSLSTKEKRRLLRRLQ 818
            + FL  K WHP+   NQKKI+ AE+   +R + E     E+K+DA+  R++ +A   G+ D +    +  ++FMY PPPG Q+ +E++   EDD AVK F+   + KK    S       LE+ VGR+ N  VS+ EQ ERFP LKDAPVE  Y + +KVNF+P    +R+++C+RCGEWGH+SGDREC + E NP               D  R+ REDPM   + M +A                         P D  ++  DP+  +L+SLS+KEK++LL++L+
Sbjct:    5 MKFLNLKGWHPSNKTNQKKIFIAEENAKQRAQAEKDRAAEIKKDAELLRFQQIAAAKGDTDAARRIDSQKVSFMYQPPPGLQKVDEKQDGVEDDEAVKAFRDKFERKKSSEASKLQK--PLERYVGRRPNEPVSIKEQVERFPMLKDAPVEGEYTSNIKVNFQPVGVKLRNIKCIRCGEWGHQSGDRECSLREFNPLGMNKIIFTYLTTLQDAARQAREDPMQIINKMNAARKNSLVLKNLPLEMQTELSGEFDIIPSDDEDL--DPEREYLASLSSKEKKKLLKKLK 288          
BLAST of mRNA_D-herbacea_M_contig96.16030.1 vs. uniprot
Match: A0A024UPL4_9STRA (Cir_N domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UPL4_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.320e-43
Identity = 93/215 (43.26%), Postives = 134/215 (62.33%), Query Frame = 3
Query:   48 LSFLFCKPWHPATTWNQKKIWEAEQKDAKRKKDEASANKELKRDADRKRYEHMAGGGGEPDPS----TSALNFMYNPPPGFQQPEEE-----ELNDEDDAVKKFKALAKMKKDPNFSAAASCSELEKLVGRKINPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECKVTE-NPNDTERRLREDPMSHM 662
            L FL  K WHP+   NQKKIW AEQK   +++ E  A +E+ +D +  R++ +A   G+ D      +  ++F+Y PPPG ++ +++     EL +EDDAVK F+ L   K++      +    LEKL GR+ N  V++ +Q ERFP LKDAPVE  Y   +KVNF+P    +R+VRC RC  WGH+SGDREC++ + NPND  R+  EDPMS++
Sbjct:    5 LKFLNLKGWHPSNKQNQKKIWIAEQKHKAKEESEKDAAREVHKDNELLRFQQIAATKGDADAERRIHSQKVSFLYQPPPGLKKVDDKHGDDGELENEDDAVKAFR-LKMEKRNAGRDHQSYQRPLEKLTGRRANDPVTIKDQVERFPMLKDAPVEGEYTQNIKVNFQPVGMKLRNVRCARCQVWGHQSGDRECEMRDQNPNDAFRQNIEDPMSYI 218          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig96.16030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIV8_ECTSI8.220e-9474.15Cir_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A8K1C5M5_PYTOL7.060e-4939.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9YC20_9STRA2.410e-4839.56Cir_N domain-containing protein n=1 Tax=Achlya hyp... [more]
A0A024GR32_9STRA1.250e-4739.93Cir_N domain-containing protein n=1 Tax=Albugo can... [more]
A0A485LG33_9STRA6.080e-4738.29Aste57867_20626 protein n=1 Tax=Aphanomyces stella... [more]
W4GLN7_9STRA2.940e-4639.41Cir_N domain-containing protein n=1 Tax=Aphanomyce... [more]
K3X636_GLOUD8.230e-4544.29Cir_N domain-containing protein n=1 Tax=Globispora... [more]
A0A397DVK8_9STRA1.010e-4437.69Cir_N domain-containing protein n=9 Tax=Aphanomyce... [more]
A0A1W0A6W9_9STRA1.040e-4438.19Cir_N domain-containing protein n=1 Tax=Thraustoth... [more]
A0A024UPL4_9STRA1.320e-4343.26Cir_N domain-containing protein n=2 Tax=Aphanomyce... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig96contigD-herbacea_M_contig96:47050..54839 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.1
Seed ortholog evalue2e-79
Seed eggNOG ortholog2880.D8LIV8
Preferred nameCIR1
KEGG koko:K06066,ko:K14558
KEGG Pathwayko03008,ko04330,map03008,map04330
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000981,GO:0003006,GO:0003674,GO:0003676,GO:0003700,GO:0003705,GO:0003712,GO:0003714,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005815,GO:0005856,GO:0006139,GO:0006355,GO:0006357,GO:0006725,GO:0006807,GO:0007276,GO:0007281,GO:0007292,GO:0008150,GO:0008152,GO:0009451,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0015630,GO:0016070,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0019219,GO:0019222,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0034641,GO:0042826,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043621,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0048468,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090304,GO:0090305,GO:0097159,GO:0140110,GO:1901360,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.RNA splicing
EggNOG OGsKOG3794@1,KOG3794@2759
Ec32 ortholog descriptionCBF1-interacting co-repressor CIR, N-terminal domain
Ec32 orthologEc-20_001740.1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Exons6
Model size1368
Cds size1272
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig96.16030.1prot_D-herbacea_M_contig96.16030.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig96 47105..54798 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935781.2299685-UTR-D-herbacea_M_contig96:47049..471041622935781.2299685-UTR-D-herbacea_M_contig96:47049..47104Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig96 47050..47104 -
1690880701.5860431-UTR-D-herbacea_M_contig96:47049..471041690880701.5860431-UTR-D-herbacea_M_contig96:47049..47104Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig96 47050..47104 -
1622935781.500532-UTR-D-herbacea_M_contig96:54798..548391622935781.500532-UTR-D-herbacea_M_contig96:54798..54839Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig96 54799..54839 -
1690880701.6683714-UTR-D-herbacea_M_contig96:54798..548391690880701.6683714-UTR-D-herbacea_M_contig96:54798..54839Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig96 54799..54839 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935781.331821-CDS-D-herbacea_M_contig96:47104..474351622935781.331821-CDS-D-herbacea_M_contig96:47104..47435Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 47105..47435 -
1690880701.6045148-CDS-D-herbacea_M_contig96:47104..474351690880701.6045148-CDS-D-herbacea_M_contig96:47104..47435Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 47105..47435 -
1622935781.3862944-CDS-D-herbacea_M_contig96:47690..481631622935781.3862944-CDS-D-herbacea_M_contig96:47690..48163Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 47691..48163 -
1690880701.6140158-CDS-D-herbacea_M_contig96:47690..481631690880701.6140158-CDS-D-herbacea_M_contig96:47690..48163Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 47691..48163 -
1622935781.399716-CDS-D-herbacea_M_contig96:49162..493341622935781.399716-CDS-D-herbacea_M_contig96:49162..49334Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 49163..49334 -
1690880701.6240478-CDS-D-herbacea_M_contig96:49162..493341690880701.6240478-CDS-D-herbacea_M_contig96:49162..49334Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 49163..49334 -
1622935781.4172065-CDS-D-herbacea_M_contig96:51644..516971622935781.4172065-CDS-D-herbacea_M_contig96:51644..51697Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 51645..51697 -
1690880701.6365466-CDS-D-herbacea_M_contig96:51644..516971690880701.6365466-CDS-D-herbacea_M_contig96:51644..51697Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 51645..51697 -
1622935781.4731846-CDS-D-herbacea_M_contig96:52484..526951622935781.4731846-CDS-D-herbacea_M_contig96:52484..52695Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 52485..52695 -
1690880701.6474488-CDS-D-herbacea_M_contig96:52484..526951690880701.6474488-CDS-D-herbacea_M_contig96:52484..52695Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 52485..52695 -
1622935781.485038-CDS-D-herbacea_M_contig96:54766..547981622935781.485038-CDS-D-herbacea_M_contig96:54766..54798Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 54767..54798 -
1690880701.6577642-CDS-D-herbacea_M_contig96:54766..547981690880701.6577642-CDS-D-herbacea_M_contig96:54766..54798Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig96 54767..54798 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig96.16030.1

>prot_D-herbacea_M_contig96.16030.1 ID=prot_D-herbacea_M_contig96.16030.1|Name=mRNA_D-herbacea_M_contig96.16030.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=424bp
MSLSFLFCKPWHPATTWNQKKIWEAEQKDAKRKKDEASANKELKRDADRK
RYEHMAGGGGEPDPSTSALNFMYNPPPGFQQPEEEELNDEDDAVKKFKAL
AKMKKDPNFSAAASCSELEKLVGRKINPGVSLAEQQERFPFLKDAPVEHA
YAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECKVTENPNDTERRLR
EDPMSHMTSAAAGGGREGGGGGATVVPPGDSAEVNGDPDSAFLSSLSTKE
KRRLLRRLQEMEATDGADESEVRRKRKKERKGAAGGARSRSDEGVGKDGG
GSRGHKKKDKRRKASKKGKARDDVESGRSKRSRHDRGESEERRSRTVNAR
RDGQGRSESGWSKPPRDDGEESKERRGKKGKWRRDDESYRESGAKRSRDD
GEESEEERRSKKSKSRRKDEGRG*
back to top

mRNA from alignment at D-herbacea_M_contig96:47050..54839-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig96.16030.1 ID=mRNA_D-herbacea_M_contig96.16030.1|Name=mRNA_D-herbacea_M_contig96.16030.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=7790bp|location=Sequence derived from alignment at D-herbacea_M_contig96:47050..54839- (Desmarestia herbacea DmunM male)
GTTGGAGAGAGCAAGGCGTGCATCGTCGAAGTCTAGAAATCATGTCGCTG TCCTTCCTCTTCTGTAAACCATGGTGAGTGTGGCGGAGTTCCTTGAGTGT GCTTGTGCGGCTGCATTTTTGGAGGTCGGCTGCACGACTGAAGCGTCGGT CTTTCATCGTCTTTTGCTTACCTTTTTGCTTACTCCAAGTTTACAACTTG TACAGCTGCCGCGAGTTGCTTGCGTGCTTTCATTCTCCAGCCTCCGTCGC GCCACAGCTTACGTGACTCATATAGTGGCTCGCAACACACTTGGTCGCTA TATATTTTTCTCCCACGTCATCAGGGTACGGGTGGTGATGTTGAATGCTT GGCTATTATATTTTGGTAGGTTAGTCAGTAAGTCATACCGACAAAGGCCT TAGAGTACTCCACACGTCGCGGTATATAGCATCGTTTCGAGGCGTGTTCC ACACATCGCAGCGACAGGCAGTACGAGTACTTCGAAGTATAAAGCAGCTA CCACCCACACAGGGCTGGGCACCGTCATGTGTTGGGTTGATTGGTCTTTT GTGTTTTGGGAGAGAGCCTACCACATAGTAGTTACCGCCGATTCAATAGA CGCTAATATATGATAAACTGGAACACAACCCTTGTTGACATTGCATATTC ACAGTCCCGTCACCAGGCGCTCTTACAACAACAGTAGTAACACTACAGAC AGTACAATTATTAATAGTTGTATATTGACAGGGGTGGCCCAGTGGTCTAA TGGCTAGGGTATTTCCTCTGTTGGCGGAAGTTGGGGGTTCGATTCCCGGT GGCACTTTTCTGTGTTATTTTCCGTCGCGGAAAACGCAAGAAGTGCGCGA GTAAGCACAACTCGATGAAAGTCGACGAGGGAAGAAAGTGCTGCACTCTT CTCGCGATAAAAATGTAGGCACGTACCGTAGTGGGAAAGGCAGGAGGAGC GCCTGTTATGTGACCCCGGATCTGAGTTACGAAGAGAGATGGAGCTAGAG AAAGAATCGGGCGCAGATAATAAATGGGACGGAAAAAAAAAGAAAAAAAA GCAGAGGTCAGTATTCCCATAGCTCGTCGACTTCCATATAGTTTTGCTCA TGTGCGCTCTCGCTCTTTCCGCGACGGAAGATGGCGCAGAAAAATGTAAT TTTGTTTTTACAACGCCGGGATTCGAACCCCGTACCTCCGCCACCAGAGG GTCAAGCTCTAATACCCACTAGACCATAGCGTCACCCTGTAATTCATATT ATACTGTTACACGAATACGTCCGACCCTGCGGGGCGGCTCTGAAATCACA GGGAGCTTGACGCACCCCTCTAACACCAATCAACAGCCGTGATGCCTACT CCAGCTCGAGCGCCCCGGACCACCTTCACGCGTCGACATGGTATGGCAGA CTGCGTCATCGCTGCTCAACCGTGAAACCGTACTAACTACAGTAGTCTAT AGATTTTCTGCGCTTTTTATCCAGTCTAGGGCTCCATAACCGCCAAAAGT GAGAAAATTGATTCCTTTACTGATGCGGACCTACCTCGCTCGACGTGGGA CGTCAACAATGACGATGACCCCTCTGGCTGGCCCCCGAACGGGTTTGGCG CGTTGCCGCTGATGTATTTGTAATTTTTAATGACAACGCAAGACACAGCA TTCAACACATCCATGCACTAGTTAGTCACGCTACTTTCGCGCACCCCTTT GACATATGCTGCTCCTGGCACCATCTCACCTCGGCGATCCGTGCAGCTTT TCGGGTTGTCAAAGATCGCCTGCCGCGCGCGCTTTACACGGGAGAAAAAC CTTCGACATGACCCCACACAACTTCGTGTTTTTCAAGAGGCAGACTCTTT CTCATATATTTGTCGCAACATGTAACAACTCGCATACCCACTCGCATGCA CCCACTCGCATGTATGATTCTTGTCAAGACAGGAGTGGTCTTAAACAAGA TTTGCCATGGGACGGCCTCGTGTTTTGGTCTCATCGTGTTCGTTCTGGTC TCTTACATAAAGAAAACCGTAAGTGGACCCAGAAAAGCCCAACCCACTTG GTGTAACGTTTTTACAACAGTACCATACTTGTGAGACCCCGACAATTAAA AAACAAAAAAATCGCCCCTGCTTCGAATATCACACGCCACACAGGCATCC AGCGACAACCTGGAACCAGAAGAAAATCTGGGAAGCCGAACAGAAGGACG CGAAGCGCAAAAAGGACGAGGCGAGCGCTAACAAGGAGCTTAAGCGAGAC GCGGACAGGAAGCGGTATGAGCACATGGCCGGGGGGGGTGGGGAGCCGGA CCCATCGACGTCCGCCTTGAACTTCATGTACAACCCGCCCCCCGGGTTTC AGCAGGTGGGGGGAGATATATGCATTCTGTTTTGACATACGGGAATGTGG GTGTAACGTGCGTGGAAAAATAGTAGAAGCAGACGCCCTTGGACCTCTCG CTAAAAGGATGACTATAGCCAGTTTCGGTGGTGGTGTGTTCAAGATTTAG GTTTTGTTGTAGATGGGTCTTTTAGTTGGTGTAACATGATGGTTGCTACG TTTAGAGGATTTCACACAAGCGAACATGGCTATGGCGGTCATTTTCATGG CGTCGTTTTGTTCTCTGCTCGTATATACCACATATGTGTATGATGCTGGC GTAAATCGGCTATCACAGCTTTTTATATATATGTATGCCTGTACGAAGTA CTACGTAGAATTTCAATTTTTATGCCACGTTTTGTCTTGTTTTTTTTCCC CTGGTCGTGTCGTGTTTACGGGTATGAGAACGCCAACAGCACTGAAGACA GCACAAAGGGCGGAACGAACCTCCGTTCTTATCCCGTTTCGATCACCCAA CTTCTTCGACTGCTGTGGAATCGCTTGCTGTTGAACACGAAGTGTGGTGC ACCACATTTGTGAAGGGCAAGCAGTGATTCGGTGTAGACGGAGCACCTGC CGCGTTTGTTTTGTCTATGAGTATATATGCTCCATACAATTGAGTTGCAT TTGCCGCCCACCCCCTTCCCATTGACCAGCATCAAGTGCGCCTCTGTCCT GACTCGCTTTCTCTCTTTTTTTTTGCGATCCCGATTGTCATTTTTGTTTT TTCCCCCTTTCGGTCTCGGGTGTTGGCGCCCCCTCGATGCAGCCGGAGGA GGAGGAGCTCAACGACGAAGATGATGCCGTGAAAAAGTTCAAAGCGTGAG TTTCTCAGTACATGTTAAGTGCGGCTAGCATTTTGTTGGAAGGTTATTGC TCACTACTAGTACAGGGGGGTCATTTGGGCTTAGGGCTAGATGTAGATTT TTTATTAGCATTTTCTGTACCCTCGGTCGATACTATTATTATTTAACTTA CAAAAACATCAGCCGTGACGTTCCAAACTGGTTCGGGGGCCAGGGGATAA TCGTCAACCACACTGTGTGATACATCGGTCGCGCGGATTCTATCGGTCCT CAGATAAGTTATGACGCAATGACTCCCCTGGGGTGTCCCAGGCTCTACAG GATAATTTTGGGAAACAAGTCCCATTATCGTGTGCACTGGATCATAATCT TTCGGAGGGGGACGGGAACTAGCTGTACATGTGTGACGTTTTCACATCAT GTGTACGTACCTGATATTATGTACGAGCACGTGCGACGACGGCGACCTCG GGAAGGCCGTCTGGTCGACCGACTGACCGACCGACCAACCGACTATCCAA CCCCAACGCAACGCGTGCGACGACAGCACCCTTTTGCCTCTGTAGGTCAC GGGTTCAACCCCCCCCCTCCGCCGTTCCTTTCCCCCCTTTTGGGGGGGGG TATCCCCATCGTGGAAGGCATTTTTGACCAGAAACTAAGAACTTTACGTC TCCGGGTTTGGTGGAGATCCCGAATCATGGAAGGTTCTCCGACCCCGAGA ATAATCTTGTTTCGTCCTCGGGTTTGGCGTTTTTTCCCTCTTGCCTCAGT AGGTCACGGGTTCGAGCCCCCTCGACACGTTTCTTTTTTTGGGGGGGGTT TCCCCACATGGAAGGTGTTTTGACCCGAGGGTGATTTGGTTTCGTCCCCT TTGTTTGCTGGAGGTGTTGCCGAGTCCGGGGGGCCCGGGGGCAGTTAAGA GACCAAAACCCACACGTGTTCCAAGTATTTAGGGTCACAGACAGACACAC CAGGCAGACAGATATGAAGTGAAGTATATACAGATAATCGTATACATAGC AAACGCGTGCGACGATGGCGGCTTGGGAAGGCCGTCTGGCCGACCGACCG ACCGACCGACCGACTATAACCATCCCCAACCCACCGGGGGCGGCGACGAC GATCTTGGGAAGGCCGCCTGGTCGACCGACAGTCTCAGAGTATCCTTTTC CCAGTGTGTGAAGCGTGTCCATTGCAATCCCATTAGATACACTCGTAGGT GTTTCTTGTCCTCGCCGTGCAGTCAATATAGTCTTAACGACGAAGGCAGT GCCTCTTGCTATAATTCGAGCCACGAAAGAAACCAATACCTCTAAATAAA TGAAACCCCTCTGCCTCAGTAGGTTACGGGTACGAGCCCCCCCACCACCT TTCCTTTTTTCCCCGCTCCCTTTCTGCACGGTGTAATTAACACCGATATC AACAGGGACTAAAAAAAAAAGGATACTATTGAGTCCGTCAGTCTGCCAGG CGGTCATGCCAAGGCCGCCGTCATCGCTTGGGGTTGGGTAGTCGGTCGGT CGGTCGGTCGGTCGGTCGGTCGGTCGGTCGATCGGTCGGTCGGCCTTCTC AAAGCCGCCATCGTCGCACGCGCTTGTAGAGATATTAGCAACAACGAATA TCCATCTAAACAAGTAAGCTACAGTACTACCTCGAGGTGCCACTCCACCG TGTGTAGTGCTAGCCTGTGCAGGCACTCTCGGCGCAATTTTCCCGTTACT TCCCGGCGTCCAACACCGTACAGTATCGTGTCGAGACTATCGATAATATT GAGGTGTACATGTTTTGCACAAATAAAAAGAAAAGAGGCAACTCGCGCTG TCACGCTCGTGTTTTTTCTACCTCCATCTATTAATAGGCAGTGTTCGACG TTCCTTGGTGATGGATAGTTCGCACGGATTGTTAGCGCTGTTGCAGCTTG TTGTGGTTCTCTTCGTGTCTTGGGAAGCGACGGCGGTACGCCACGGGTAA CTATTCTAATGTGCACGGACATGGCAACGATACGTTCTTAGAAGTTATCA TATACACGAGCGAATCGCCTAGAGGACACGGACGGTATCCCAAGCACCTA CGCCCGTCGGTACTTGCCGTCGGTAGTTTTATCTTGAGAACGGTACAGAG AATGAGCTCTTGCGATTATGGCAAGCATCCCCTGATGTTTGTGCCGCTCT CTCGTTTTTTTTTCGTTGTTGTAATTTTTATGCGACCGCGGAGCCGTGAT AAGAATTGGACCGGCAAATCGGTTGCAGCAGGCGTTTTTACAATATTAGT TGACAACGCATCGATTGTCCTTGGCTGGATGGACGCCTTACAATTCGCCG CGCAGTCTCGCGAAGATGAAAAAGGACCCCAATTTTTCTGCGGCGGCGAG CTGCTCGGAGCTGGAGAAGCTGGTGGGAAGAAAAATTAACCCGGGCGTAT CGCTCGCAGAACAGCAGGAACGGTTCCCGTTCCTCAAGGACGCGCCTGTG GAGCATGCGTACGCTGCGGGGGTGAAGGTAAGGGTTACCCCCGACTTTCC AAGAAATTTACTCGAAATTGGCTATTGCTAGGGGAGAAGGTATACGGATT TTTTTTTTGGAGGGGGGGGGGCGTTCATACACGGACCTCTTACGTTAATA TAGTAGTTTATGTGGGTTAGGGCTGGTGTTCGGGTTTCATTTTTTATGTT TTATTACTTTTTTTTTATACTAGTTTTAGCATATGGGTCCCCGTATATTT GACGGGCCACTAGAGGTCCACGTACCATCCCCCTAATGCTACGTAGCTAC TGTATATGGTTGGTCGTGTGGAAAGCCATCCGCGATAAATGTCCCAGGTG GGTACCGGGGATGGGTGGCGGGGGGCATGATGGTAGGGGTGCATCATTTT GTACATGCCTCAGAGGTATTGATATTCTCATGAAGTACAAGCTTACTGAA GTCATATGTTTTGCGATGAACGCTTGGTGTAGCGACGATGCTATCGCGAG GGCCCCTAATAAATAAGGCCCAAAACACTTATATTGACGTGTGTATCGCG AGACAGACAGACGCGGCATGAATCGCGGATCTCGTTCTTTTTTATCATGC GGTGGCAGTAGACTTATCAACGATGCTACATTTTCATTCTTCGGGGCGGG GGGGATCGGGAAGAAGGATACTTGCGCGAGCCCTTTTTCACCTTGTTTTG GGCCTATTTGTTATCTGTTTTGGATGCGGGCAGGTATGGTACTCGATATA CGGTTCAATAGCGGCGGGTGGTGGTTGGCCGTTACACCTCCCTATATGTA GCGTTTTCGTACATCGTTGCGTCACGCGAGGGGTACCGACAAGCTCTCTC TCTCTCTGTATCTTTTTTTTTTACTCGTCGCTTGTTTCGGATACACTATC ATTGTAGGCGCCGTATGTACATGGATTCAAGCATTCCTTCCAAAATTGGG CTGCTTATATATGTCAACACTTCGACTAACCCGTGTACCCTCGGACCCCG GAATGTCGTCTGTATTTTCTTGATAGGTTAACTTCAAGCCTTTCAACAAT GTGATTCGGCATGTGCGGTGTATGCGATGCGGAGAGTGGGGACACCGAAG CGGGGACCGCGAGTGCAAGGTCACCGAGAACCCTAACGATACCGAGCGTA GGCTGAGGGAAGATCCGATGTCGCACATGACTTCTGCCGCGGCGGGCGGG GGACGGGAAGGCGGCGGGGGCGGTGCGACGGTGGTCCCGCCCGGGGATAG CGCCGAAGTGAATGGAGACCCCGACTCGGCGTTTTTGAGTAGCCTGTCGA CGAAGGAGAAGCGGCGGCTCTTGCGGCGGTTGCAGGAGATGGAGGCGACG GATGGGGCGGATGAGAGCGAGGTTAGAAGGAAGCGGAAGAAGGAGCGCAA AGGTGCAGCTGGTGGCGCGCGGAGCAGATCAGATGAAGGTGTCGGAAAGG ACGGCGGTGGATCTAGGGGGCATAAGAAGAAGGACAAGAGGAGGAAGGCG TTATCGTCGTCTTCTGATGGGGACGAAAGCGGTGCTGACACTAAAAAGAG TAGCAGAAAAAGGAGAAGAGAAGGAGGCTCGTCGCTGACGGGTGCTTCCG CGGGAATAGCGAAACGGTCGCGGAACGATGGGGAGGAGTGGGAAGAGCGC CAGAGTAAGAAGGGACGAGCGCGGCGGGATGACGAGGGACGCGGGGAGAG TGGACGGTCGAAAAAACGACCACGGACCGATGGGGAGGAACTGGAAGGGC GCAGGAGTAAGAAAGGCAAAGCACGGGATGATGTCGAGAGTGGACGGTCG AAGCGGTCACGGCACGATCGCGGGGAATCCGAAGAGCGCAGGAGTAGGAC AGTCAACGCACGGCGGGATGGCCAGGGACGCTCAGAGAGTGGGTGGTCGA AACCGCCACGGGACGATGGCGAGGAATCTAAAGAGCGCAGAGGCAAGAAA GGAAAATGGCGGCGGGATGACGAGAGCTACCGAGAGAGTGGCGCGAAGCG GTCGCGGGACGATGGGGAGGAATCGGAAGAAGAGCGAAGGAGTAAGAAAA GCAAGTCGCGGCGGAAGGACGAGGGACGCGGATAGAGTGGACGGTCGAAT AAAGAGCGGCCGGAAACGCTGCCACCAGGAGGGAAAGGAT
back to top

Coding sequence (CDS) from alignment at D-herbacea_M_contig96:47050..54839-

>mRNA_D-herbacea_M_contig96.16030.1 ID=mRNA_D-herbacea_M_contig96.16030.1|Name=mRNA_D-herbacea_M_contig96.16030.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=2544bp|location=Sequence derived from alignment at D-herbacea_M_contig96:47050..54839- (Desmarestia herbacea DmunM male)
ATGTCGCTGTCCTTCCTCTTCTGTAAACCATGATGTCGCTGTCCTTCCTC
TTCTGTAAACCATGGCATCCAGCGACAACCTGGAACCAGAAGAAAATCTG
GGAAGCCGAACAGAAGGACGCGAAGCGCAAAAAGGACGAGGCGAGCGCTA
ACAAGGAGCTTAAGCGAGACGCGGACAGGAAGCGGTATGAGCACATGGCC
GGGGGGGGTGGGGAGCCGGACCCATCGACGTCCGCCTTGAACTTCATGTA
CAACCCGCCCCCCGGGTTTCAGCAGGCATCCAGCGACAACCTGGAACCAG
AAGAAAATCTGGGAAGCCGAACAGAAGGACGCGAAGCGCAAAAAGGACGA
GGCGAGCGCTAACAAGGAGCTTAAGCGAGACGCGGACAGGAAGCGGTATG
AGCACATGGCCGGGGGGGGTGGGGAGCCGGACCCATCGACGTCCGCCTTG
AACTTCATGTACAACCCGCCCCCCGGGTTTCAGCAGCCGGAGGAGGAGGA
GCTCAACGACGAAGATGATGCCGTGAAAAAGTTCAAAGCCCGGAGGAGGA
GGAGCTCAACGACGAAGATGATGCCGTGAAAAAGTTCAAAGCTCTCGCGA
AGATGAAAAAGGACCCCAATTTTTCTGCGGCGGCGAGCTGCTCGGAGCTG
GAGAAGCTGGTGGGAAGAAAAATTAACCCGGGCGTATCGCTCGCAGAACA
GCAGGAACGGTTCCCGTTCCTCAAGGACGCGCCTGTGGAGCATGCGTACG
CTGCGGGGGTGAAGTCTCGCGAAGATGAAAAAGGACCCCAATTTTTCTGC
GGCGGCGAGCTGCTCGGAGCTGGAGAAGCTGGTGGGAAGAAAAATTAACC
CGGGCGTATCGCTCGCAGAACAGCAGGAACGGTTCCCGTTCCTCAAGGAC
GCGCCTGTGGAGCATGCGTACGCTGCGGGGGTGAAGGTTAACTTCAAGCC
TTTCAACAATGTGATTCGGCATGTGCGGTGTATGCGATGCGGAGAGTGGG
GACACCGAAGCGGGGACCGCGAGTGCAAGGTCACCGAGAACCCTAACGAT
ACCGAGCGTAGGCTGAGGGAAGATCCGATGTCGCACATGACTTCTGCCGC
GGCGGGCGGGGGACGGGAAGGCGGCGGGGGCGGTGCGACGGTGGTCCCGC
CCGGGGATAGCGCCGAAGTGAATGGAGACCCCGACTCGGCGTTTTTGAGT
AGCCTGTCGACGAAGGAGAAGCGGCGGCTCTTGCGGCGGTTGCAGGAGAT
GGAGGCGACGGATGGGGCGGATGAGAGCGAGGTTAGAAGGAAGCGGAAGA
AGGAGCGCAAAGGTGCAGCTGGTGGCGCGCGGAGCAGATCAGATGAAGGT
GTCGGAAAGGACGGCGGTGGATCTAGGGGGCATAAGAAGAAGGACAAGAG
GAGGAAGGCGTTAACTTCAAGCCTTTCAACAATGTGATTCGGCATGTGCG
GTGTATGCGATGCGGAGAGTGGGGACACCGAAGCGGGGACCGCGAGTGCA
AGGTCACCGAGAACCCTAACGATACCGAGCGTAGGCTGAGGGAAGATCCG
ATGTCGCACATGACTTCTGCCGCGGCGGGCGGGGGACGGGAAGGCGGCGG
GGGCGGTGCGACGGTGGTCCCGCCCGGGGATAGCGCCGAAGTGAATGGAG
ACCCCGACTCGGCGTTTTTGAGTAGCCTGTCGACGAAGGAGAAGCGGCGG
CTCTTGCGGCGGTTGCAGGAGATGGAGGCGACGGATGGGGCGGATGAGAG
CGAGGTTAGAAGGAAGCGGAAGAAGGAGCGCAAAGGTGCAGCTGGTGGCG
CGCGGAGCAGATCAGATGAAGGTGTCGGAAAGGACGGCGGTGGATCTAGG
GGGCATAAGAAGAAGGACAAGAGGAGGAAGGCGAGTAAGAAAGGCAAAGC
ACGGGATGATGTCGAGAGTGGACGGTCGAAGCGGTCACGGCACGATCGCG
GGGAATCCGAAGAGCGCAGGAGTAGGACAGTCAACGCACGGCGGGATGGC
CAGGGACGCTCAGAGAGTGGGTGGTCGAAACCGCCACGGGACGATGGCGA
GGAATCTAAAGAGCGCAGAGGCAAGAAAGGAAAATGGCGGCGGGATGACG
AGAGCTACCGAGAGAGTGGCGCGAAGCGGTCGCGGGACGATGGGGAGGAA
TCGGAAGAAGAGCGAAGGAGTAAGAAAAGCAAGTCGCGGCGGAAGGACGA
GGGACGCGGATAGGAGTAAGAAAGGCAAAGCACGGGATGATGTCGAGAGT
GGACGGTCGAAGCGGTCACGGCACGATCGCGGGGAATCCGAAGAGCGCAG
GAGTAGGACAGTCAACGCACGGCGGGATGGCCAGGGACGCTCAGAGAGTG
GGTGGTCGAAACCGCCACGGGACGATGGCGAGGAATCTAAAGAGCGCAGA
GGCAAGAAAGGAAAATGGCGGCGGGATGACGAGAGCTACCGAGAGAGTGG
CGCGAAGCGGTCGCGGGACGATGGGGAGGAATCGGAAGAAGAGCGAAGGA
GTAAGAAAAGCAAGTCGCGGCGGAAGGACGAGGGACGCGGATAG
back to top