mRNA_D-herbacea_M_contig953.16022.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig953.16022.1
Unique NamemRNA_D-herbacea_M_contig953.16022.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig953.16022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig953contigD-herbacea_M_contig953:13009..15592 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size450
Cds size447
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig953.16022.1prot_D-herbacea_M_contig953.16022.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig953 13009..15590 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935779.6027415-CDS-D-herbacea_M_contig953:13008..131371622935779.6027415-CDS-D-herbacea_M_contig953:13008..13137Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig953 13009..13137 +
1690880700.8712902-CDS-D-herbacea_M_contig953:13008..131371690880700.8712902-CDS-D-herbacea_M_contig953:13008..13137Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig953 13009..13137 +
1622935779.6208384-CDS-D-herbacea_M_contig953:13565..137241622935779.6208384-CDS-D-herbacea_M_contig953:13565..13724Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig953 13566..13724 +
1690880700.880344-CDS-D-herbacea_M_contig953:13565..137241690880700.880344-CDS-D-herbacea_M_contig953:13565..13724Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig953 13566..13724 +
1622935779.6381507-CDS-D-herbacea_M_contig953:14634..147721622935779.6381507-CDS-D-herbacea_M_contig953:14634..14772Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig953 14635..14772 +
1690880700.8939672-CDS-D-herbacea_M_contig953:14634..147721690880700.8939672-CDS-D-herbacea_M_contig953:14634..14772Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig953 14635..14772 +
1622935779.6512177-CDS-D-herbacea_M_contig953:15569..155901622935779.6512177-CDS-D-herbacea_M_contig953:15569..15590Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig953 15570..15590 +
1690880700.9023914-CDS-D-herbacea_M_contig953:15569..155901690880700.9023914-CDS-D-herbacea_M_contig953:15569..15590Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig953 15570..15590 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig953.16022.1

>prot_D-herbacea_M_contig953.16022.1 ID=prot_D-herbacea_M_contig953.16022.1|Name=mRNA_D-herbacea_M_contig953.16022.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=149bp
NNLHLLSVRDRISEPYQWRRRQLVLSCVHTEFLRSCPAKDRVKVSSVKVM
ISDAFSQGGRLLDGGKSGPDELQYVIRALCRGLSCAAVEPEDCTMQAQNE
RGAHQRERTLPTCVVRKAVRSIPRCTSWRIWTKRQDVICLRTISLVRGE
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mRNA from alignment at D-herbacea_M_contig953:13009..15592+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig953.16022.1 ID=mRNA_D-herbacea_M_contig953.16022.1|Name=mRNA_D-herbacea_M_contig953.16022.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=2584bp|location=Sequence derived from alignment at D-herbacea_M_contig953:13009..15592+ (Desmarestia herbacea DmunM male)
AACAACCTTCATCTACTTTCTGTAAGGGACCGAATCTCAGAACCCTATCA
GTGGCGTCGCCGGCAGCTTGTACTTTCTTGCGTTCACACGGAATTTCTTC
GATCATGTCCGGCAAAGGACAGGGTAAAGGTGAGAGATCATCGGGGTCGA
AAATGAGCGGGATTGAGTCTCTCTCCCCGGCCCAACGCACTCAAACGCGT
TCGGCGAGCCGTGACGCGGAGGCCGCTGAGGCTGCCATCCGTGACGCTGG
CGCCCTTGAGGCTCGCCGCGCTAGCGCGCCCCTAGCCGTGAAGGCTGCTT
CCCCTGCTTACGCAGGGTCGAAGGGGAATGTCGACCACATAGGGAAGTCC
GCCGGGACGGACGGCACGCGCCATTTTTTTCCCCGCCATAACCCGACCAT
TTTGTCGGAACTGGTTCAGTTTACGTCTGCATTGCGTGATGCACTTGCCA
GCATGCGTGTCGCATGTGATGATTCCCACCCCACTTTATGGACGTGTGGC
TGGGAAAAATGTTTAGAACGTCATGTGGTGCGTGCTGTTCGTTCCTTATC
ACCGCAGGTGTCATCGGTGAAAGTGATGATTTCAGACGCGTTCAGCCAGG
GTGGCAGGTTGCTGGACGGGGGCAAAAGCGGTCCCGACGAACTACAATAC
GTCATACGCGCTCTTTGCAGAGGTCTGAGTTGTGCTGCGGTCGAGCCGGA
AGACTGCACGATGCAGGTAGCTGTTAAGACTGGAGTCGGTGACCAATTTG
CGGGTTTAGGCGCTCATTTTTTTTCGGGGCGGAACTTAAGCAGTTTGCCG
TTTGATAACGTAGACGAGAGCACGACGAGGAGACCCCCCACAACAGTTAC
GAATACCCCCACGCAGCTGGGAAGCATGACAGTGCCTGTCGGTCGAATGC
ACGAGCAACGTGCGAGGAAGACTGGTGTGGTTGGAGAATATTTCACATCG
ATACCGCCTTGGCCCTGGGGCCAAATTGTCGTTCCGTCTCTTGTTTTCTT
GTGGTGACTCCGTTTTTGCGTTTTTGTAGGGCCCACTCATTGGCAACAAT
GCTTGTCTGATCTCTGCTTCATTGACGGTGACACTGTTTTTGTGGAAGTA
CTGCCGACACCGTTGGTAACAACGCTTGTCCGTCCTTGCTGCCTTGCAGG
AGACCCCGCACTTGTAGGAGCGCTATTGGCACCGTTGGCAACAACGCGTG
TGCCAATGGGCACAGAATCGTGGAAATAACTGGGGGTGCACAGAAATGTT
AAGTTGTTAAGCTTGCAATGTTAGTAGCACCGCTACAGTCCTTTGACAGC
CGCGAGGTGCGAGACGCCGCCCTCCTAGATTTTGGTCTATGCTGCCTGAA
CTGTGCTGATCCCTCCCATTTAGCCCGAGAATGCCCCGGCTCATGTTTAT
AATTCACGTGATGATCATCCACCCAGCAAATTGTGTGAAGGTGATCCCAC
TACTGTTGAAAATCGCTGGCGCCGTTGGCAACAATGTTGTGCCAATGGGC
ACTGAATCGCTCGAACAGTTGACAAAGGCGTAGTCGTCGCCATAGTTGAA
GGTGCAACGGTAAGTAGCCCGCTTTTACCAGTAGCATCGCGGTCGTCGTT
CCCTTTTCCGCTGCATATTATTGCAGGCACAGAACGAGCGCGGGGCGCAC
CAGAGGGAACGGACCCTGCCAACATGCGTGGTGAGGAAGGCAGTTCGGTC
GATCCCGCGTTGCACGTCGTGGAGAATCTGGACCAAGAGGCAGGATGTGA
TCTGCCTGAGAACGGTAAGAGTGGTGATGATGTCGCGTATTGCCTTTCTG
AGGAAGACGGAATTTATAGCCCCGGCAACCCATTGTGCAATGTTACAACA
CCTATGTTCCTCACGGATACTGCCGTAGATATCAGTAGTACGGCGGAAAT
TGATGGCCGTCCGAGCCGTGGTCATGGCCGGAGTAAGCTCCCGGTTGTCC
CACGAGTTCGAAGCGACGCTGACGCGTCGAGTGTAGCAGTGGATAGTCAA
ACCGAATACGAGTCAATGTCTGTTGCTGTAGGGGGCCAGAGCAACCCCCC
GTCGTCTGGCCAGTCGACGCAATTGATACCCCCCTCGACGCAATTGATAC
CCCCCAACCTTAGAATTAGTGCTCGAGGAGGTACGAATCGGGGCGCGAGG
CGTTGCAGTAAGGCTTGGTGTTACCCGGGAAAGGGCACGCCTCACAACGC
TCGCATTGCAAATTCCCCGCCGAATGATATTCATGCAATAACAAACGGTG
ATGATGCAGTTATTGGTTCCTTAGCAGTCAGAACAAAACGACGTGGTAAC
GAGGAAGACCGATTAAGAAGTATAGTTGAAGAAACTAATAAACTACGGGT
AGATCGTGCGACGGACCCACAGGTTGACACATCCAACCGGACGTCGTGTT
CTCCTACCGTTGCGGCGCATCCAGCGAACGGTAAAGGTAGTATTGGTAGC
TGTGGCAATTTTTCGCACTTGACGAAAACGCATGACAGCATTTATGCACT
TGATCCACCTGACGGTAAGGAGCCTGATGACCCTCCTGCTGCTGTGTTTC
CGTCGCCGCAGATCAGTTTAGTGCGGGGTGAGCG
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Coding sequence (CDS) from alignment at D-herbacea_M_contig953:13009..15592+

>mRNA_D-herbacea_M_contig953.16022.1 ID=mRNA_D-herbacea_M_contig953.16022.1|Name=mRNA_D-herbacea_M_contig953.16022.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=894bp|location=Sequence derived from alignment at D-herbacea_M_contig953:13009..15592+ (Desmarestia herbacea DmunM male)
AACAACCTTCATCTACTTTCTGTAAGGGACCGAATCTCAGAACCCTATCA
GTGGCGTCGCCGGCAGCTTGTACTTTCTTGCGTTCACACGGAATTTCTTC
GATCATGTCCGGCAAAGGACAGGGTAAAGAACAACCTTCATCTACTTTCT
GTAAGGGACCGAATCTCAGAACCCTATCAGTGGCGTCGCCGGCAGCTTGT
ACTTTCTTGCGTTCACACGGAATTTCTTCGATCATGTCCGGCAAAGGACA
GGGTAAAGGTGTCATCGGTGAAAGTGATGATTTCAGACGCGTTCAGCCAG
GGTGGCAGGTTGCTGGACGGGGGCAAAAGCGGTCCCGACGAACTACAATA
CGTCATACGCGCTCTTTGCAGAGGTCTGAGTTGTGCTGCGGTCGAGCCGG
AAGACTGCACGATGCAGGTGTCATCGGTGAAAGTGATGATTTCAGACGCG
TTCAGCCAGGGTGGCAGGTTGCTGGACGGGGGCAAAAGCGGTCCCGACGA
ACTACAATACGTCATACGCGCTCTTTGCAGAGGTCTGAGTTGTGCTGCGG
TCGAGCCGGAAGACTGCACGATGCAGGCACAGAACGAGCGCGGGGCGCAC
CAGAGGGAACGGACCCTGCCAACATGCGTGGTGAGGAAGGCAGTTCGGTC
GATCCCGCGTTGCACGTCGTGGAGAATCTGGACCAAGAGGCAGGATGTGA
TCTGCCTGAGAACGGCACAGAACGAGCGCGGGGCGCACCAGAGGGAACGG
ACCCTGCCAACATGCGTGGTGAGGAAGGCAGTTCGGTCGATCCCGCGTTG
CACGTCGTGGAGAATCTGGACCAAGAGGCAGGATGTGATCTGCCTGAGAA
CGATCAGTTTAGTGCGGGGTGAGATCAGTTTAGTGCGGGGTGAG
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