mRNA_D-herbacea_M_contig95.15985.1 (mRNA) Desmarestia herbacea DmunM male
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Overview
Homology
BLAST of mRNA_D-herbacea_M_contig95.15985.1 vs. uniprot
Match: D7FWD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD3_ECTSI) HSP 1 Score: 643 bits (1659), Expect = 2.590e-209 Identity = 470/920 (51.09%), Postives = 550/920 (59.78%), Query Frame = 1
Query: 754 VGRGAGAGLLGGYLIQSGAGSGNLYRGGGEGSGGFLGGDGQSTDGRGVGXXXXXXXXXXXQSWRLAGARPASIHQRFNAMMGVQRESTLREEEA-HLLDSLNDDTSLRLHFGLHVTFQATQGENGSFMALDMDTGECSMRSLHGLEKNQQQVTFRLIDLEDPESYRSILYGRSVWLQIVAGTGEPTWKQGSVVGARVHGPGMLPTVVIDPKDKNAFYS-----GSSRPGTSSGSAAPDGNLLRSVRAPVSSGSEKFPPGGINNSVAAGGAPGGDRGWGKSAMGAGGKXXXXXXXXXXXXXXXXXXX--GGGNTDANRPVGVPFPFKAASSKQGNPSGSSNETVLRLMNKSAMVNCRWIVRAVRADGQAVPGKAGQEVSNMDCVYLEQDFFYMTRVSHNASVVLKALQHKKRGS-------VSDGNGKRGSAHKQYPVERRGVFKLQVAEADELRPGEERSAALMRKAKRGLKRSEARRGGHRTYIHNDRPEDRLVSGAAFPREIRVRTTRFASESESRAISNATRSPPRSRDGDRGSXXXXXXXXXXXXXXXXXXXXSSSLLLPA---AAWIPTSSWGTKMLQAMADAARAPAETDITASHAKVLREWRQRWGDPRSQSSQLLKGAGEGXXXXXXXXXXXXXGDTGVDGF------QMCPRCRYLSSSPSTRSKPPPISRSNSSNSCYTSNSHYLASLSAPTPNNDAVDGGLKLGQYCLCSVNQDIQREFLVNXXXXXXXXXXXXTPGGECR---RAGRSPWPAGSPNKGTARAGG---------------------DDTSRRGDALDSGAG---GGATSRDVLSPAAPGYGRGESGLWPAGAIRGGSGXXXXXXXXXXXXXXVVGGGLRRARDRRADRRRKNKDPFEALEERLLDGFSLESITRQLERQDETLLKGVRN 3360
+GRG G+ LLGGY+IQ G G+ GGGE SG F G DG + GRG SW AG RP S+HQ+FNAM+G+QRES+ REEE +LDSLN D SLRLH+GLHVTFQA QGENG FM+LDM+TG SM LH L+KN Q VTF++IDLEDPESYRSI YG+ VWLQIV G GEPTW+ GSV+GARVHGPGMLPTVVIDP D A S SRPGTS + P R PVS+ G N A +PG XXXXXXXXX GGGNTDANRPVGVP+PFKAA SK G G++NET+LR MNKSA+VNCRW VR VR+DGQ++ GK G+EVSN+D VYLEQDFFYMTRVS NASVVLKAL H R + +GKRG+A K +PV RRGVFKLQVA+ADELRPGEERSAALMRKAKRGLKRSEARR GHRTY+H RP+DRL SGAAFPREIRVRTT F SES SRAIS+A+ SP R G+XXXXXXX S +AW+ SWGT +LQAM D ARA AE +TASHA+VLREW+QRWG + SQ + G G +G MC RCRYL++ P T PPP + T +S L+ + + LG+YCLC+VN++IQ E L PG AG P S + TA G + + G+ GAG GGA+ R+ G G S + + + +G XXXXXX GGL+RARDRRADRR+K KDPFEALEERLLDGFSLESIT++L++QDETL KGVR+
Sbjct: 180 LGRG-GSSLLGGYVIQQG---GSFRGGGGEASGLFPGADGLAGGGRGT-----SGHGGQQASWGRAGDRPMSLHQKFNAMVGIQRESSSREEEGTQVLDSLNHDPSLRLHYGLHVTFQAVQGENGYFMSLDMETGGVSMIPLHELQKNNQ-VTFKMIDLEDPESYRSIFYGKPVWLQIVPGPGEPTWRDGSVLGARVHGPGMLPTVVIDPNDAAAASSMAHQTAHSRPGTSESTPGPG------TRRPVSTHGASSGRG--NTGWNARDSPGXXXXXXXXXXXXXXXXXXXXXXXXEVVGAGRVSSAVGGGNTDANRPVGVPYPFKAAGSKHGGAGGTANETLLRAMNKSAIVNCRWTVRPVRSDGQSLLGKDGKEVSNLDYVYLEQDFFYMTRVSENASVVLKALSHNNRSAGXXXXXXXXXASGKRGTAQKHHPVGRRGVFKLQVADADELRPGEERSAALMRKAKRGLKRSEARRSGHRTYVHKQRPQDRLTSGAAFPREIRVRTTHFVSESASRAISSASHSPHRGG----GAXXXXXXXVVGYSRSGVSLGGSWDGFGDGGGGSAWLSAGSWGTDVLQAMTDFARAGAERGVTASHARVLREWKQRWGPLGTIWSQADDHSSRGTTGDSSDSNGEGEDGGGDEGHGWSLVSPMCSRCRYLTAHPLT--PPPPAG------TIGTCSSRSLSXXXXXXXXXXXDEAEVTLGRYCLCTVNREIQTEVLQGDASGGHARAATAEPGAALSVGTEAGHEP----SVSSPTAEGGXXXXXXXXXXXXXXXXXXXXXMNASEMGGELALEGAGRPVGGASERNTSLGGGXXCGGGLSRMPSSNTLALAAGGFAAXXXXXXI------GGLKRARDRRADRRKK-KDPFEALEERLLDGFSLESITKRLQQQDETLQKGVRH 1058
BLAST of mRNA_D-herbacea_M_contig95.15985.1 vs. uniprot
Match: A0A835Z7L2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L2_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 2.400e-16 Identity = 131/448 (29.24%), Postives = 182/448 (40.62%), Query Frame = 1
Query: 1123 GSFMALDMDTGECSMRSLHGLEKNQQQVTFRLIDLEDPESYR-SILYGRSVWLQ------------------IVAGTGEPTWKQGSVVGARVHGPGMLPTVVI-----DPKDKNAFYSGSSRPGTSSGSAAPDGNLLRSVRAPVSSGSEKFPPGGINNSVAAGGAPGGDRGWGKSAMGAGGKXXXXXXXXXXXXXXXXXXXGGGNTDANRPVGVPFPFKAA----SSKQGNPSGSSNETVLRLMNKSAMVNCRWIVRAVRADGQAVPGKAGQEVSNMDCVYLEQDFFYMTRVSHNASVVLKALQHKKRGS---------------------VSDGNGKRGSAHKQYPV-ERRGVFKLQVAEADEL-RPGEER-SAALMRKAKRGLKRSEARRGGHRTYIHN--------------------------DRPEDRLVSGAAFPREIRVRT 2232
G +A+DM TG L ++ + +F L+DLED SY+ +I+ G VWL I AGTG+P+W QGSV+GARVH PG LPT+ + + S+ A + + P ++ + + S GA XXXXXXXXXX R VG+P P ++A S QG G E +R+ N A+ WI+R V A+G A+P K GQ V N+D YLEQDFFY+T + +L+ L+ G S S PV ++RG+F+LQ E +L RP +E+ S LM KA+R L+RS R T++ P + L SG AF R +R T
Sbjct: 189 GGALAVDMGTGFACAVPL-AATSDRHRCSFHLVDLEDIGSYKQNIVLGSRVWLLNIVFGSRXXXXXXXXXXLIEAGTGDPSWHQGSVLGARVHEPGALPTIKLRAGADQDXXXXXXXXXXXXXXXXXXXXXXXXXMPSSITAAAADARRESPLPRLHAAQRS------------STSGA----PAPHSSVPXXXXXXXXXXXXXXXAEPRVVGMPRPVRSAVPRGSDAQG---GGFGEQYMRMRNADAVNIAHWILRPVTAEGIALPDKMGQVVCNLDHCYLEQDFFYITFDPVTGAALLRELRPSSGGGSXXXXXXXXXXXXXXXXXXXXXSSXXXXXXSGAAACPVVDKRGIFRLQTTEKTDLARPAKEQASMQLMSKARRQLQRSAVTRQRRCTFMRQRHSTTDTLASTRXXXXXXXXXXXXXXGEPHETLRSGGAFARGVRAAT 616
BLAST of mRNA_D-herbacea_M_contig95.15985.1 vs. uniprot
Match: A0A8J2X156_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X156_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.870e-13 Identity = 55/133 (41.35%), Postives = 74/133 (55.64%), Query Frame = 1
Query: 1048 SLNDDTSLRLHFGLHVTFQATQGENGSFMALDMDTGECSMRSLHGLEKNQQQVTFRLIDLEDPESYRSILYGRSVWLQIVAGTGEPTWKQGSVVGARVHGPGMLPTVVIDPKDKNAFYSGSSRPGTSSGSAAP 1446
SL D + RLHFG + QA N +F + G S G + V F+L++LE+P S+++ +G +VWLQI G GEP+W+ GSVVGA+V G LPTV IDP A Y G + T G+ AP
Sbjct: 130 SLATDNNTRLHFGAAIALQA-HVNNDAFCVKSQEDGRIVATSHIG---PKDVVLFKLLELEEPGSHKACRFGDAVWLQICGGPGEPSWRHGSVVGAKVVGACNLPTVPIDPNV--AEYIGGDQVETGLGAPAP 256
BLAST of mRNA_D-herbacea_M_contig95.15985.1 vs. uniprot
Match: A0A7S3JQ49_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQ49_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.360e-8 Identity = 46/115 (40.00%), Postives = 64/115 (55.65%), Query Frame = 1
Query: 1054 NDDTSLRLHFGLHVTFQATQGENGSFMALDMDTG-ECSMRSLHGLEKNQQQV-TFRLIDLEDPESYRSILYGRSVWLQIVAGTGEPTWKQGSVVGARVHGPGMLPTVVIDPKDKN 1392
N + + RLH+G + ++ NG F+A+ E M S N V F+LI+LEDP S +++ YG VWLQI G GEP+W+ GSV+GARV LP V I ++N
Sbjct: 135 NRNFNTRLHYGSTIALESIV--NGEFVAVGSGPRLEGYMNSRLPEACNYDTVFLFKLIELEDPCSAKAVQYGDHVWLQIHGGNGEPSWRNGSVIGARVREAVSLPIVPIALSNEN 247
BLAST of mRNA_D-herbacea_M_contig95.15985.1 vs. uniprot
Match: K3WJK1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJK1_GLOUD) HSP 1 Score: 68.9 bits (167), Expect = 5.240e-8 Identity = 45/126 (35.71%), Postives = 67/126 (53.17%), Query Frame = 1
Query: 1012 STLREEEAHLLDSLNDDTSLRLHFGLHVTFQATQGENGSFMALDMDTGECSMRSLHGLEKNQ-----QQVTFRLIDLEDPESYRSILYGRSVWLQIVAGTGEPTWKQGSVVGARVHGPGMLPTVVI 1374
+TL + E L + N S +L++G V F+ NG M + G+ ++SL L+ Q + F LIDL D S +I YG +VWLQ+ GTGE +W+QG V+GA+V L T+ +
Sbjct: 94 TTLSDAEK-LRNDFNSQQS-KLYYGCSVAFELF---NGHLMMIGSLDGQVRVQSLESLQIPQIKGCKDRAIFTLIDLTDARSANTICYGDAVWLQLSVGTGEVSWEQGGVLGAKVREAPQLKTLAL 214
BLAST of mRNA_D-herbacea_M_contig95.15985.1 vs. uniprot
Match: A0A1V9YNC0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YNC0_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 9.510e-7 Identity = 41/122 (33.61%), Postives = 63/122 (51.64%), Query Frame = 1
Query: 1036 HLLDSLNDDTSLRLHFGLHVTFQATQGENGSFMALDMDTGECSMRSLHGLEKN----QQQVTFRLIDLEDPESYRSILYGRSVWLQIVAGTGEPTWKQGSVVGARVHGPGMLPTVVIDPKDK 1389
H S ND RL++G V F+ NG M + + + ++ L L+ + ++ F LI++ + S I +G SVWLQI GTGE +W+QG V+GA+V L T+ + DK
Sbjct: 154 HDFSSQND---ARLYYGSTVAFELF---NGDLMMISVTDSQVCVQPLERLKHQPKGARDKLLFTLINMNEQRSANPIQFGDSVWLQISVGTGETSWEQGGVLGAKVRKAPDLQTLSLTQDDK 269
BLAST of mRNA_D-herbacea_M_contig95.15985.1 vs. uniprot
Match: A0A024UVL1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UVL1_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 5.390e-6 Identity = 49/162 (30.25%), Postives = 74/162 (45.68%), Query Frame = 1
Query: 1027 EEAHLLDSLNDDTSLRLHFGLHVTFQATQGENGSFMALDMDTGECSMRSL----HGLEKNQQQVTFRLIDLEDPESYRSILYGRSVWLQIVAGTGEPTWKQGSVVGARVHGPGMLPTVVIDPKDKNAFYSGSSRPGTSSGSAAPDG------NLLRSVRAPV 1482
+ A L + + + R++FG V F+ NG M + + + L H + ++ F L++L + S +I YG SVWLQI GTGE +W+QG V+GA+V L + + K RPG S DG +LL +V PV
Sbjct: 187 DTAKLRNDFSAQSDARIYFGSTVAFELF---NGDMMMVSVADSTVVIHPLEHIRHQARGARDKLLFTLVNLHELRSANAIKYGDSVWLQISVGTGETSWEQGGVLGAKVRKVPELHALTLTQK----------RPGNSLDVGGQDGGDHHEPDLLTNVGFPV 335
BLAST of mRNA_D-herbacea_M_contig95.15985.1 vs. uniprot
Match: A0A2D4C2N4_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2N4_PYTIN) HSP 1 Score: 61.6 bits (148), Expect = 7.790e-6 Identity = 39/128 (30.47%), Postives = 62/128 (48.44%), Query Frame = 1
Query: 1027 EEAHLLDSLNDDTSLRLHFGLHVTFQATQGENGSFMALDMDTGECSMRSLHGLE--------KNQQQVTFRLIDLEDPESYRSILYGRSVWLQIVAGTGEPTWKQGSVVGARVHGPGMLPTVVIDPKD 1386
E L + N S RL++G + + NG M ++ G +++L ++ + + F LIDL D S +I YG +VWLQ+ GTGE +W+QG V+GA+V L + + D
Sbjct: 248 EAERLRNDFNSQYS-RLYYGCSIALELF---NGHLMMVNCADGRVGVQALEKMQLKGASATTTGRHRAVFTLIDLADVRSANAISYGDAVWLQLSVGTGEFSWEQGGVLGAKVREAPQLKALALADDD 371
BLAST of mRNA_D-herbacea_M_contig95.15985.1 vs. uniprot
Match: A0A2D4BZS4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZS4_PYTIN) HSP 1 Score: 60.8 bits (146), Expect = 1.630e-5 Identity = 39/128 (30.47%), Postives = 61/128 (47.66%), Query Frame = 1
Query: 1027 EEAHLLDSLNDDTSLRLHFGLHVTFQATQGENGSFMALDMDTGECSMRSLHGLE--------KNQQQVTFRLIDLEDPESYRSILYGRSVWLQIVAGTGEPTWKQGSVVGARVHGPGMLPTVVIDPKD 1386
E L + N S RL +G + + NG M ++ G +++L ++ + + F LIDL D S +I YG +VWLQ+ GTGE +W+QG V+GA+V L + + D
Sbjct: 248 EAERLRNDFNSQYS-RLXYGXSIALELF---NGHLMMVNCADGRVGVQALEKMQLKGASATTTGRHRAVFTLIDLADVRSANAISYGDAVWLQLXVGTGEFSWEQGGVLGAKVREAPQLKALALADDD 371
BLAST of mRNA_D-herbacea_M_contig95.15985.1 vs. uniprot
Match: A0A0P1AQT3_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQT3_PLAHL) HSP 1 Score: 60.5 bits (145), Expect = 2.260e-5 Identity = 35/95 (36.84%), Postives = 55/95 (57.89%), Query Frame = 1
Query: 1072 RLHFGLHVTFQATQGENGSFMALDMDTGECSMRSLHGL-----EKNQQQVTFRLIDLEDPESYRSILYGRSVWLQIVAGTGEPTWKQGSVVGARV 1341
R+ +G V + NG+FM + G+ ++SL + E + +V L++LED S SI YG SVWLQ+ G+G+ +W+QG V+GA+V
Sbjct: 227 RMSYGCSVALELF---NGNFMMVGSPEGKVRVQSLEKIQISHAEGYKDRVIVTLLNLEDVLSAGSIRYGDSVWLQLSVGSGDVSWEQGGVLGAKV 318 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig95.15985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_M_contig95.15985.1 >prot_D-herbacea_M_contig95.15985.1 ID=prot_D-herbacea_M_contig95.15985.1|Name=mRNA_D-herbacea_M_contig95.15985.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=1120bp SVDQTYTTALLRGRHPRSFRNERGIYQFVIDSNKRANMRQKAQGQQQHRQback to top mRNA from alignment at D-herbacea_M_contig95:95427..110975+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_M_contig95.15985.1 ID=mRNA_D-herbacea_M_contig95.15985.1|Name=mRNA_D-herbacea_M_contig95.15985.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=15549bp|location=Sequence derived from alignment at D-herbacea_M_contig95:95427..110975+ (Desmarestia herbacea DmunM male)back to top Coding sequence (CDS) from alignment at D-herbacea_M_contig95:95427..110975+ >mRNA_D-herbacea_M_contig95.15985.1 ID=mRNA_D-herbacea_M_contig95.15985.1|Name=mRNA_D-herbacea_M_contig95.15985.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=6720bp|location=Sequence derived from alignment at D-herbacea_M_contig95:95427..110975+ (Desmarestia herbacea DmunM male)back to top |