mRNA_D-herbacea_M_contig94.15969.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig94.15969.1
Unique NamemRNA_D-herbacea_M_contig94.15969.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig94.15969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig94contigD-herbacea_M_contig94:863635..863819 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size187
Cds size183
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935769.553291-CDS-D-herbacea_M_contig94:863634..8638171622935769.553291-CDS-D-herbacea_M_contig94:863634..863817Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig94 863635..863817 +
1690880696.1398711-CDS-D-herbacea_M_contig94:863634..8638171690880696.1398711-CDS-D-herbacea_M_contig94:863634..863817Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig94 863635..863817 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig94.15969.1prot_D-herbacea_M_contig94.15969.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig94 863635..863817 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig94.15969.1

>prot_D-herbacea_M_contig94.15969.1 ID=prot_D-herbacea_M_contig94.15969.1|Name=mRNA_D-herbacea_M_contig94.15969.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=61bp
VECFGKLRVRFHSTNDVDLILHDVAFIPTLGLNLFSLHTAQQEGTVVSDK
TGDHLLEGRLF
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mRNA from alignment at D-herbacea_M_contig94:863635..863819+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig94.15969.1 ID=mRNA_D-herbacea_M_contig94.15969.1|Name=mRNA_D-herbacea_M_contig94.15969.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=185bp|location=Sequence derived from alignment at D-herbacea_M_contig94:863635..863819+ (Desmarestia herbacea DmunM male)
GTGGAATGCTTTGGTAAGTTGCGTGTAAGATTCCACAGCACAAACGACGT
GGACCTGATTCTGCATGACGTGGCGTTTATTCCAACTCTTGGCCTTAATC
TTTTTTCGTTGCACACTGCGCAGCAGGAGGGTACGGTTGTGTCGGACAAA
ACTGGTGATCACTTGTTGGAGGGGCGTTTGTTTTT
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Coding sequence (CDS) from alignment at D-herbacea_M_contig94:863635..863819+

>mRNA_D-herbacea_M_contig94.15969.1 ID=mRNA_D-herbacea_M_contig94.15969.1|Name=mRNA_D-herbacea_M_contig94.15969.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=366bp|location=Sequence derived from alignment at D-herbacea_M_contig94:863635..863819+ (Desmarestia herbacea DmunM male)
GTGGAATGCTTTGGTAAGTTGCGTGTAAGATTCCACAGCACAAACGACGT
GGACCTGATTCTGCATGACGTGGCGTTTATTCCAACTCTTGGCCTTAATC
TTTTTTCGTTGCACACTGCGCAGCAGGAGGGTACGGTTGTGTCGGACAAA
ACTGGTGATCACTTGTTGGAGGGGCGTTTGTTTGTGGAATGCTTTGGTAA
GTTGCGTGTAAGATTCCACAGCACAAACGACGTGGACCTGATTCTGCATG
ACGTGGCGTTTATTCCAACTCTTGGCCTTAATCTTTTTTCGTTGCACACT
GCGCAGCAGGAGGGTACGGTTGTGTCGGACAAAACTGGTGATCACTTGTT
GGAGGGGCGTTTGTTT
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