mRNA_D-herbacea_M_contig94.15966.1 (mRNA) Desmarestia herbacea DmunM male
|
Overview
Homology
BLAST of mRNA_D-herbacea_M_contig94.15966.1 vs. uniprot
Match: D7FLK0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK0_ECTSI) HSP 1 Score: 458 bits (1179), Expect = 1.290e-144 Identity = 240/276 (86.96%), Postives = 251/276 (90.94%), Query Frame = 1
Query: 1 DFVVSFFVELSVMMLERLYLDPGAKE------------------MSKLWPRWRMMLRRRFSRRKRMTREDKAKEEMEWRKINEDIELEREGVEPLLDSYFVYSSEVLGLFIMPVVILLIMVFGQQTKMAELYGIRDNEMGYYLAFALVIIPFSLIMDVFVLNTQELVHGWRVYDYIAYQKYRFSVRQHRWMMRNETLDESIAEPMQTLDLMCFSSQYYFINALFALGMVLGLMGFTIFLRWEYSLFGDPVGPLIFAVMFLFGDLMQKLLRRLADIK 774
DFVVSFFVELSVMMLERLYLDPG KE MSKL+PRWRMM +RRFSRR+RMTREDKAKEEM WRKINEDIELEREGVEPLLDSYFVYS+EVLG+FIMP VI LIMVF QQTKMAELYGIRDNEMGYYLAFALVIIPFSLIMDVFVLNTQELVHGWRVYDYIAYQKYRFSVRQHRWMMRNETLDESIAEPMQTLDL+CFSSQ+YFINALFA+GMVLGLMG TIFLRWEYSLFGDPVGPLIFAVMFLFGDL+Q+LLRRLA+IK
Sbjct: 13470 DFVVSFFVELSVMMLERLYLDPGTKEQSALCTLVCIRYGKRVYQMSKLYPRWRMMWKRRFSRRRRMTREDKAKEEMAWRKINEDIELEREGVEPLLDSYFVYSTEVLGMFIMPGVIFLIMVFSQQTKMAELYGIRDNEMGYYLAFALVIIPFSLIMDVFVLNTQELVHGWRVYDYIAYQKYRFSVRQHRWMMRNETLDESIAEPMQTLDLLCFSSQFYFINALFAVGMVLGLMGLTIFLRWEYSLFGDPVGPLIFAVMFLFGDLVQQLLRRLANIK 13745
BLAST of mRNA_D-herbacea_M_contig94.15966.1 vs. uniprot
Match: A0A836CCN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCN3_9STRA) HSP 1 Score: 365 bits (938), Expect = 3.070e-112 Identity = 184/265 (69.43%), Postives = 215/265 (81.13%), Query Frame = 1
Query: 1 DFVVSFFVELSVMMLERLYLDPGAKEMSKLWPRWRMMLRRRFSRRKRMTREDKAK-----EEMEWRKINEDIELEREGVEPLLDSYFVYSSEVLGLFIMPVVILLIMVFGQQTKMAELYGIRDNEMGYYLAFALVIIPFSLIMDVFVLNTQELVHGWRVYDYIAYQKYRFSVRQHRWMMRNETLDESIAEPMQTLDLMCFSSQYYFINALFALGMVLGLMGFTIFLRWEYSLFGDPVGPLIFAVMFLFGDLMQKLLRRLADIKAS 780
DF+V FFVELS+ +L+RLYLDP E++KLWPRWRM+L+RR +RR+RMTRE+KAK EEMEWR++NE IELE EGVEPLL SY YS EVLGL+I P +I+L+M+F QT M ELYGIR NEM YYLAF +VIIPFSL+MDVFVLNTQELVHGWRVYDYIAYQKYRFSVR+HRWM RNE LDESIAEP+QT+DL+CFSSQYYF+ +F+LGM G++G TI LRWEY+LF DPV PLIF +M LADIKAS
Sbjct: 11633 DFIVGFFVELSIAVLQRLYLDPSLDEVTKLWPRWRMLLKRRLTRRRRMTREEKAKASHTAEEMEWRRVNEQIELETEGVEPLLSSYAGYSGEVLGLYIQPFIIILLMMFSSQTVMPELYGIRPNEMVYYLAFGVVIIPFSLLMDVFVLNTQELVHGWRVYDYIAYQKYRFSVREHRWMQRNEILDESIAEPLQTMDLLCFSSQYYFMLTIFSLGMTFGMIGITIHLRWEYNLFADPVAPLIFLIMXXXXXXXXXXXXXLADIKAS 11897
BLAST of mRNA_D-herbacea_M_contig94.15966.1 vs. uniprot
Match: A0A6H5J8V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8V0_9PHAE) HSP 1 Score: 327 bits (839), Expect = 5.590e-99 Identity = 188/275 (68.36%), Postives = 199/275 (72.36%), Query Frame = 1
Query: 1 DFVVSFFVELSVMMLERLYLDPGAKE-----------------MSKLWPRWRMMLRRRFSRRKRMTREDKAKEEMEWRKINEDIELEREGVEPLLDSYFVYSSEVLGLFIMPVVILLIMVFGQQTKMAELYGIRDNEMGYYLAFALVIIPFSLIMDVFVLNTQELVHGWRVYDYIAYQKYRFSVRQHRWMMRNETLDESIAEPMQTLDLMCFSSQYYFINALFALGMVLGLMGFTIFLRWEYSLFGDPVGPLIFAVMFLFGDLMQKLLRRLADIK 774
DFVVSFFVELSVMMLERLYLDPG KE MSKL+PRWRM+ +RRFSRR+RMTREDKAKEEM WRKINEDIELEREGVEPLLDSYFVYS+EVLG+FIMP VI LIMVF QQTKMAELYGIRDNEMGYYLAFALVIIPFSLIMDVFVLNTQE +YFINALFA+GMVLGLMG TIFLRWEYSLFGDPVGPLIFAVMFLFGDL+Q+LLR LA+IK
Sbjct: 1356 DFVVSFFVELSVMMLERLYLDPGTKESALCILVCIRYGKRGFQMSKLYPRWRMLWKRRFSRRRRMTREDKAKEEMAWRKINEDIELEREGVEPLLDSYFVYSTEVLGMFIMPGVIFLIMVFSQQTKMAELYGIRDNEMGYYLAFALVIIPFSLIMDVFVLNTQE---------------------------------------------------FYFINALFAVGMVLGLMGLTIFLRWEYSLFGDPVGPLIFAVMFLFGDLVQQLLRHLANIK 1579
BLAST of mRNA_D-herbacea_M_contig94.15966.1 vs. uniprot
Match: A0A7S1U8F7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8F7_9STRA) HSP 1 Score: 312 bits (799), Expect = 6.700e-95 Identity = 149/263 (56.65%), Postives = 213/263 (80.99%), Query Frame = 1
Query: 1 DFVVSFFVELSVMMLERLYLDPGAKEMSKLWPRWRMMLRRRFSRRKRMTREDKAKEEMEWRKINEDIELEREGVEPLLDSYFVYSSEVLGLFIMPVVILLIMVFGQQTKMAELYGIRDNEMGYYLAFALVIIPFSLIMDVFVLNTQELVHGWRVYDYIAYQKYRFSVRQHRWMMRNETLDESIAEPMQTLDLMCFSSQYYFINALFALGMVLGLMGFTIFLRWE-----YSLFGDPVGPLIFAVMFLFGDLMQKLLRRLADIK 774
DFV ++ +EL++M++ER+YLDP K++S LWP+++M+L+RRF RKRMTRE+KA+EEMEWR+INE+IEL EGVEPLLDSYFVYS+E L + P++ L ++VF T+M + YGIR+NE+ +Y FAL ++P++L+MDVF+LN QEL HGWRVYDY++YQ+YRFSVR++RW++R+ DESI+EP+QTLDLMCFSSQYYF+N+L ++GM++ + G T+FLR E Y+ F DP+ ++ ++F+ GDL+ LL++ ADIK
Sbjct: 279 DFVQAYVIELTMMVVERVYLDPYLKKLSALWPKYKMILKRRFRGRKRMTREEKAEEEMEWRRINEEIELSNEGVEPLLDSYFVYSNEATALMLSPIISLYLLVFNDATQMPDNYGIRENEIVFYTMFALYMVPYTLVMDVFLLNAQELAHGWRVYDYVSYQRYRFSVREYRWILRSPVQDESISEPLQTLDLMCFSSQYYFLNSLMSMGMMMIMFGITMFLRTEDSGEMYNPFSDPLLGVLILMVFVLGDLLMWLLKKAADIK 541
BLAST of mRNA_D-herbacea_M_contig94.15966.1 vs. uniprot
Match: A0A7S2WTL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTL2_9STRA) HSP 1 Score: 291 bits (746), Expect = 2.440e-88 Identity = 143/258 (55.43%), Postives = 199/258 (77.13%), Query Frame = 1
Query: 1 DFVVSFFVELSVMMLERLYLDPGAKEMSKLWPRWRMMLRRRFSRRKRMTREDKAKEEMEWRKINEDIELEREGVEPLLDSYFVYSSEVLGLFIMPVVILLIMVFGQQTKMAELYGIRDNEMGYYLAFALVIIPFSLIMDVFVLNTQELVHGWRVYDYIAYQKYRFSVRQHRWMMRNETLDESIAEPMQTLDLMCFSSQYYFINALFALGMVLGLMGFTIFLRWEYSLFGDPVGPLIFAVMFLFGDLMQKLLRRLADIK 774
DFV+S+FV+L VM +ERLYLDP K +++LWPRWR+MLRRR R RMTRE++A+EE+EWR++NE IELE EG+EPL+DSY +YS+E++GL P++ L +M F ++T++ + Y I + M YY F I+ F+L++DV +LNTQELVHGW+V+DYI+YQ+YRFSVR HRW + +DESIA+ MQTLD CFSSQYYF+ AL+A+ ++L + G TIFLR +Y+LFGDPV +I ++ L DL+Q RL+D++
Sbjct: 376 DFVLSYFVKLGVMAVERLYLDPFLKTVARLWPRWRIMLRRRLRPRHRMTREERAREELEWRRVNEAIELESEGIEPLMDSYSIYSAELVGLLCTPLLNLFVMAFREETEIPDNYRIGNTAMLYYTLFNFYIVLFALVLDVLILNTQELVHGWKVFDYISYQRYRFSVRDHRWAPDSGIVDESIAQGMQTLDAFCFSSQYYFVVALYAMSIMLSVYGVTIFLRTDYNLFGDPVAIVILLIVLLLCDLLQAGAIRLSDVR 633
BLAST of mRNA_D-herbacea_M_contig94.15966.1 vs. uniprot
Match: A0A7S1CFB9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFB9_9STRA) HSP 1 Score: 286 bits (731), Expect = 1.590e-84 Identity = 144/264 (54.55%), Postives = 196/264 (74.24%), Query Frame = 1
Query: 1 DFVVSFFVELSVMMLERLYLDPGAKEMSKLWPRWRMMLRRRFSRRKRMTREDKAKEEMEWRKINEDIELEREGVEPLLDSYFVYSSEVLGLFIMPVVILLIMVFG-------QQTKMAELYGIRDNEMGYYLAFALVIIPFSLIMDVFVLNTQELVHGWRVYDYIAYQKYRFSVRQHRWMMRNETLDESIAEPMQTLDLMCFSSQYYFINALFALGMVLGLMGFTIFLRWEYSLFGDPVGPLIFAVMFLFGDLMQKLLRRLADI 771
DF ++FF+EL VM+ ER+YLDPG K + KL P+W+M RRRF + +R TRE++AKEEMEW++INE+I+LE EGVEPLLDS+FVY+ E L LF+ P V LL++ Q T++ YGIR+ ++G+Y F++VIIP L MD+F+LNTQELVHGW+++DY+AYQ YRF+VR+ RW M +ETLDESI+EP+QTLD+MCFSSQ+YF+ A GM++ +M T+ LR Y+ F D LI M+ F +M+ LL RL+DI
Sbjct: 1011 DFTIAFFIELVVMVFERIYLDPGLKSLEKLIPKWKMQFRRRFFKNRRQTREERAKEEMEWKRINEEIQLESEGVEPLLDSFFVYAGETLALFMSPFVQLLLLATDASAFHGFQLTQIPFNYGIRETDLGFYTIFSVVIIPAQLAMDMFLLNTQELVHGWKLFDYVAYQNYRFTVRETRWQMSSETLDESISEPLQTLDMMCFSSQFYFMTCFHAWGMIITMMAITMHLRIGYNFFSDVAFGLILIFMWTFCRIMKVLLIRLSDI 1274
BLAST of mRNA_D-herbacea_M_contig94.15966.1 vs. uniprot
Match: A0A7S4RD69_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RD69_9STRA) HSP 1 Score: 284 bits (726), Expect = 3.380e-84 Identity = 128/256 (50.00%), Postives = 196/256 (76.56%), Query Frame = 1
Query: 4 FVVSFFVELSVMMLERLYLDPGAKEMSKLWPRWRMMLRRRFSRRKRMTREDKAKEEMEWRKINEDIELEREGVEPLLDSYFVYSSEVLGLFIMPVVILLIMVFGQQTKMAELYGIRDNEMGYYLAFALVIIPFSLIMDVFVLNTQELVHGWRVYDYIAYQKYRFSVRQHRWMMRNETLDESIAEPMQTLDLMCFSSQYYFINALFALGMVLGLMGFTIFLRWEYSLFGDPVGPLIFAVMFLFGDLMQKLLRRLADI 771
F FVE+S++ +ER+Y+ P K + LWPRW+M+ +R+F +RKR+TR K +EEM+WR++NEDI+L EGVEPLLDS ++S E G + P++ L++MVF +QT++A Y +R NE+GYY FA +IP++ ++DVF+LNTQEL+HGWR+YDY+AYQ++RF+ R++RW++ ++T DESI+E MQT+DL+CFSSQYYFI ++FA M+ + T+FLR+EY+ GDP P+I +FL ++++ +L R+A++
Sbjct: 716 FTAGHFVEISIITIERMYIHPCIKVLKNLWPRWKMLAQRKFGKRKRLTRSQKQQEEMKWRRVNEDIQLRNEGVEPLLDSVALFSVEKTGTILSPIICLIVMVFFEQTQIAMQYNVRKNELGYYTLFACYMIPWTSVVDVFILNTQELIHGWRLYDYMAYQRFRFTTREYRWVLSSDTFDESISEGMQTMDLLCFSSQYYFIISVFAFAMLTNMFAITVFLRYEYNFLGDPAMPIIVLAIFLICEVIRLILCRIANV 971
BLAST of mRNA_D-herbacea_M_contig94.15966.1 vs. uniprot
Match: A0A6U6EV38_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6EV38_9STRA) HSP 1 Score: 275 bits (704), Expect = 7.560e-81 Identity = 132/258 (51.16%), Postives = 193/258 (74.81%), Query Frame = 1
Query: 1 DFVVSFFVELSVMMLERLYLDPGAKEMSKLWPRWRMMLRRRFSRRKRMTREDKAKEEMEWRKINEDIELEREGVEPLLDSYFVYSSEVLGLFIMPVVILLIMVFGQQTKMAELYGIRDNEMGYYLAFALVIIPFSLIMDVFVLNTQELVHGWRVYDYIAYQKYRFSVRQHRWMMRNETLDESIAEPMQTLDLMCFSSQYYFINALFALGMVLGLMGFTIFLRWEYSLFGDPVGPLIFAVMFLFGDLMQKLLRRLADIK 774
+F S F+E+S++++ERLY+DP K + LWPRW+++++R+F+ R+R+TR K EE +WRK+NE+IEL EGVEPLLDS ++S E LG ++P++ L + +F Q +MA +Y I D +M YY FAL IIP++ ++DV LN+QEL+HGWRV+DY+AYQ+YRFS R++RW M T+DESI+E +QTLDL+CFSSQYYF+ +LF+ GM+L + T+FLR ++ GDPV P+IF VMF+ DL++ ++D K
Sbjct: 1835 EFTASHFIEMSIILVERLYVDPCIKAIKNLWPRWKLVIKRKFTWRRRLTRTQKYLEETKWRKVNEEIELRSEGVEPLLDSMGLFSVESLGGLVIPLICLFLCMFYSQVEMASMYNISDRDMAYYTWFALFIIPWTSVVDVCSLNSQELIHGWRVHDYMAYQRYRFSTRENRWAMGAATVDESISEGLQTLDLLCFSSQYYFLVSLFSFGMLLSMFAMTVFLRKNFNFLGDPVTPIIFLVMFVMCDLVRATAVSISDAK 2092
BLAST of mRNA_D-herbacea_M_contig94.15966.1 vs. uniprot
Match: A0A812WHN4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812WHN4_9DINO) HSP 1 Score: 269 bits (687), Expect = 9.820e-80 Identity = 139/264 (52.65%), Postives = 194/264 (73.48%), Query Frame = 1
Query: 1 DFVVSFFVELSVMMLERLYLDPGAKEMSKLWPRWRMMLRRRFSRRKRMTREDKAKEEMEWRKINEDIELEREGVEPLLDSYFVYSSEVLGLFIMPVVILLIMVFGQQ-------TKMAELYGIRDNEMGYYLAFALVIIPFSLIMDVFVLNTQELVHGWRVYDYIAYQKYRFSVRQHRWMMRNETLDESIAEPMQTLDLMCFSSQYYFINALFALGMVLGLMGFTIFLRWEYSLFGDPVGPLIFAVMFLFGDLMQKLLRRLADI 771
DFV +FF+E VM++ER+YLDP K + P+W+M LRRRF + +RMTRE + KEE+E++KI +DI E EGVEPLLDSYFVYS+E L LF+ P+V L++++ T++A LYGI ++ YY +FALVIIP L MD+F+LNTQE+ HGW+++DYI YQKYRFSVR+ RW + ++ LDESI EP+QT+D+MCFSSQ+YFI +LFA GM++ G T LR E+++FGD + IF +++L G L++ L LA++
Sbjct: 518 DFVTAFFIESMVMVVERIYLDPYLKMFAARIPKWKMQLRRRFMKNRRMTREQRLKEELEYQKILDDIRSEEEGVEPLLDSYFVYSNETLALFMTPLVQLMLLMTDASPFHDFSITQIASLYGIAPTDLIYYTSFALVIIPAQLAMDIFLLNTQEIAHGWKLFDYITYQKYRFSVREVRWQISSDVLDESIGEPLQTVDMMCFSSQFYFITSLFAWGMMIIQFGITSHLRKEFNMFGDVMFGPIFVIVWLLGMLIKNCLIILANV 781
BLAST of mRNA_D-herbacea_M_contig94.15966.1 vs. uniprot
Match: A0A2R5G2D9_9STRA (Hepatocyte growth factor receptor n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2D9_9STRA) HSP 1 Score: 254 bits (649), Expect = 1.920e-73 Identity = 126/257 (49.03%), Postives = 190/257 (73.93%), Query Frame = 1
Query: 1 DFVVSFFVELSVMMLERLYLDPGAKEMSKLWPRWRMMLRRRF-SRRKRMTREDKAKEEMEWRKINEDIELEREGVEPLLDSYFVYSSEVLGLFIMPVVILLIMVFGQQTKMAELYGIRDNEMGYYLAFALVIIPFSLIMDVFVLNTQELVHGWRVYDYIAYQKYRFSVRQHRWMMRNETLDESIAEPMQTLDLMCFSSQYYFINALFALGMVLGLMGFTIFLRWEYSLFGDPVGPLIFAVMFLFGDLMQKLLRRLAD 768
DFVVS+ VEL +M++ERL +P ++ +WP+W++MLRRRF + R++MTR+ +A+EE EW+K+NE I LE EGVEPLL +Y Y + L + P V + ++VF + T++ + YGIR+ ++ +Y F+L+IIPF+L MD+F+LNTQEL G+++Y+Y++YQ+YRFSVR+HRW M +T+DESIA +Q +D +CFSSQY+F+ L A G++L + G T+ +R Y+LF DP+ P I V++L L +KLLRR+ D
Sbjct: 11116 DFVVSYVVELGMMLVERLVAEPVTDHINLMWPKWKLMLRRRFVNNRRKMTRDQRAREEAEWKKVNELIALETEGVEPLLGAYATYVNSAQALMMAPFVNIFLIVFNKTTEIPDGYGIRETDLKFYFMFSLLIIPFTLAMDIFLLNTQELTLGFKIYEYVSYQQYRFSVREHRWQMDADTVDESIAPKLQYIDSLCFSSQYFFLAGLHAWGILLFVFGVTVHIRNTYNLFADPMMPAIVLVVWLLCILFEKLLRRVGD 11372 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig94.15966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_M_contig94.15966.1 >prot_D-herbacea_M_contig94.15966.1 ID=prot_D-herbacea_M_contig94.15966.1|Name=mRNA_D-herbacea_M_contig94.15966.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=275bp DFVVSFFVELSVMMLERLYLDPGAKEMSKLWPRWRMMLRRRFSRRKRMTRback to top mRNA from alignment at D-herbacea_M_contig94:813054..817908+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_M_contig94.15966.1 ID=mRNA_D-herbacea_M_contig94.15966.1|Name=mRNA_D-herbacea_M_contig94.15966.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=4855bp|location=Sequence derived from alignment at D-herbacea_M_contig94:813054..817908+ (Desmarestia herbacea DmunM male)back to top Coding sequence (CDS) from alignment at D-herbacea_M_contig94:813054..817908+ >mRNA_D-herbacea_M_contig94.15966.1 ID=mRNA_D-herbacea_M_contig94.15966.1|Name=mRNA_D-herbacea_M_contig94.15966.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1650bp|location=Sequence derived from alignment at D-herbacea_M_contig94:813054..817908+ (Desmarestia herbacea DmunM male)back to top |