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Homology
BLAST of mRNA_D-herbacea_M_contig94.15955.1 vs. uniprot
Match: A0A6H5KDM4_9PHAE (RNase_PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM4_9PHAE) HSP 1 Score: 574 bits (1479), Expect = 7.500e-198 Identity = 347/572 (60.66%), Postives = 388/572 (67.83%), Query Frame = 1
Query: 1 MSIRDGPSQSKNDQDFIIRSLRSGRRVDGRKLGEMRLLRMVFARAEGQASAEIQLGRTRVLAVVTGELVPPFPDRPTEGFLHFNVELGPMAAPGAGE-RNSPVTVEIARVIEIGVRDSQALDTEALCVIGGEKVWQLRCDVHVLDHGGNLIDACTLATMAALRHFRRPDVTIDGSNVLVHHTDDKEPHPLALHHVPICVTFAIFE-----------------DAGDAMLGRP--GGXXXXXXXXGVGGMSGAGASSSKKQHTAVDPTEVEEEVMKGRITFALTAHKELCALHKNGGVAITRDTILGCARLAAVKVEEIHKVLDEALAGADAKAVLDRQGRLRGTDPSAASQGLVPNKFQGTIP--------GTKSTPFVVAQAPMPVAAESLEVKHLDYDDLHVTQGIREEGLRGGGNRGGRGLDMADARSTDLFAKMAKAASMTEARISKEEQDADAVHPPKPLSGSSPPNRNRTAGAVAV-----GLDGGRGGGGIEQESGVRIHSKDSSEGRVNDAASREFARLAETLKSDSSRKA---SPPGAGGMSVDSD-EEETTVKLEGEFKAAE 1605
M+IR+GP QSKND +FI+RSLR GRRVDGR+LG+MRLLRMVFARAEGQASAEIQLGRTRVL VVTGE+VPPFPDRP EGFLHFNVELGPMAA GE RNSP++VEIARVIEIGVRDSQALDTEALC+IGGEK LRCDVH+LDHGGNLIDACTLATMAALRHFRRP+VT+DGS V+VHHTDDKEPHPLALHHVPICVTFAIFE D GD +GRP GG GGM+GAG SSS QH A DPTE EEEVMKGRITFA+TAHKE + D G + ++E + E L G K+ RLRGT PSAA GT+STPFVV QAPMPVA ESL+VKHLDYDDLHVTQGIREEGLRGGGNRGGRGLD+ DAR TDLFAKMA AA +TEAR++ EE D P ++ R + AV + G D G G E++ R + EG + A EFAR+A+TL+ S K P A M VDSD EEE TV LEGEFK+AE
Sbjct: 1 MAIREGPWQSKNDYEFILRSLRGGRRVDGRELGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPMEGFLHFNVELGPMAAASMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEK---LRCDVHILDHGGNLIDACTLATMAALRHFRRPEVTVDGSKVVVHHTDDKEPHPLALHHVPICVTFAIFEVTLRYCYSDFGPIMGGKDTGDPSIGRPAVGGGGASKS---TGGMNGAGMSSSATQHIAADPTEAEEEVMKGRITFAMTAHKE-----------VVEDVWKG------LDIDEDETLETEGLQGFKEKS------RLRGTSPSAAGAXXXXXXXXXXXXXXXXXXXXGTRSTPFVVGQAPMPVAPESLKVKHLDYDDLHVTQGIREEGLRGGGNRGGRGLDINDARDTDLFAKMAAAAKLTEARVNAEEGSRD------PKGRATTAGRASSKSAVTIQEGRYGTDSAAAGVGAERKP-RRSTRQGGGEGHAEEDAKSEFARMAQTLRQQSGTKGVGRKQPAA--MDVDSDDEEEETVTLEGEFKSAE 534
BLAST of mRNA_D-herbacea_M_contig94.15955.1 vs. uniprot
Match: A0A835ZEC1_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC1_9STRA) HSP 1 Score: 362 bits (928), Expect = 6.420e-116 Identity = 205/418 (49.04%), Postives = 263/418 (62.92%), Query Frame = 1
Query: 1 MSIRDGPSQSKNDQDFIIRSLRSGR-RVDGRKLGEMRLLRMVFARAEGQASAEIQLGRTRVLAVVTGELVPPFPDRPTEGFLHFNVELGPMAAPGAGE-RNSPVTVEIARVIEIGVRDSQALDTEALCVIGGEKVWQLRCDVHVLDHGGNLIDACTLATMAALRHFRRPDVTIDGSN-VLVHHTDDKEPHPLALHHVPICVTFAIFEDAGDAMLGRPGGXXXXXXXXGVGGMSGAGASSSKKQHTAVDPTEVEEEVMKGRITFALTAHKELCALHKNGGVAITRDTILGCARLAAVKVEEIHKVLDEALAGADAKAVLDRQGRLRGTDPSAASQGLVPNKFQGTIPGTKSTPFVVAQAPMPVAAESLEVKHLDYDDLHVTQGIREEGLRGGGNRGGRGLDMADARSTDLFAKMAKAAS 1245
M+IRDG + + N F++ +LR G+ R+DGR+L +R + F R+EGQAS +Q GRT+ LAVV+ E+VPP+PDRPT+G L FNVEL MA G R SP+ EI R+IE G+RDSQALDTE LC++ GEKVWQLR DVH+LD+GGNL+DA LA +AAL+HFRRPDVT+ G V VHH+D++E PLALHHVP+C+TFA+F+D G KQ VDP EVEE VMKGR+T AL AH+E+C LHKNGG+A++ +T+L CA +AA KV +H+ L E L ADA A R+ RLRG A+ + + Q A PM A+ V HL YDDLHVT +R+ R G G RGL +A + LFA+MAKAA+
Sbjct: 1 MAIRDGFTHTINTNAFVLETLRGGKQRIDGRELNTLRQIAFQFTRSEGQASVLVQWGRTQTLAVVSAEVVPPYPDRPTDGALMFNVELSKMAEASVGLLRASPLATEITRIIERGIRDSQALDTETLCIVAGEKVWQLRVDVHILDNGGNLVDAAALAAIAALQHFRRPDVTVSGEGFVEVHHSDEREAQPLALHHVPLCITFALFDDMG-------------------------------KQRVVVDPDEVEEAVMKGRVTIALNAHREVCTLHKNGGMAMSAETLLACADVAAAKVVALHERLREELQKADAAARQAREQRLRGGAAFASHTAHLASLMQ-------------AAQPMDETADLTRVGHLGYDDLHVTGKVRDAPERALGG-GARGLQGDEAAKSALFAQMAKAAA 373
BLAST of mRNA_D-herbacea_M_contig94.15955.1 vs. uniprot
Match: D7G4N5_ECTSI (3'-5'-exoribonuclease/ RNA binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4N5_ECTSI) HSP 1 Score: 301 bits (770), Expect = 5.550e-97 Identity = 149/169 (88.17%), Postives = 160/169 (94.67%), Query Frame = 1
Query: 1 MSIRDGPSQSKNDQDFIIRSLRSGRRVDGRKLGEMRLLRMVFARAEGQASAEIQLGRTRVLAVVTGELVPPFPDRPTEGFLHFNVELGPMAAPGAGE-RNSPVTVEIARVIEIGVRDSQALDTEALCVIGGEKVWQLRCDVHVLDHGGNLIDACTLATMAALRHFRRPD 504
M+IR+GP QSKND DFI+RSLR GRR DGR+LG+MRLLRMVFARAEGQASAEIQLGRTRVL VVTGE+VPPFPDRPTEGFLHFNVELGPMAA GE RNSP++VEIARVIEIGVRDSQALDTEALC+IGGEKVWQLRCDVH+LDHGGNLIDACTLATMAALRHFRRP+
Sbjct: 1 MAIREGPWQSKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRPE 169
BLAST of mRNA_D-herbacea_M_contig94.15955.1 vs. uniprot
Match: I2CP19_NANGC (Exosome complex component RRP45 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CP19_NANGC) HSP 1 Score: 278 bits (712), Expect = 1.660e-82 Identity = 169/411 (41.12%), Postives = 229/411 (55.72%), Query Frame = 1
Query: 7 IRDGPSQSKNDQDFIIRSLRSGR-RVDGRKLGEMRLLRMVFARAEGQASAEIQLGRTRVLAVVTGELVPPFPDRPTEGFLHFNVELGPMAAPGAGE-RNSPVTVEIARVIEIGVRDSQALDTEALCVIGGEKVWQLRCDVHVLDHGGNLIDACTLATMAALRHFRRPDVTI--------------DG---------------SNVLVHHTDDKEPHPLALHHVPICVTFAIFEDAGDAMLGRPGGXXXXXXXXGVGGMSGAGASSSKKQHTAVDPTEVEEEVMKGRITFALTAHKELCALHKNGGVAITRDTILGCARLAAVKVEEIHKVLDEALAGADAKAVLDRQGRLRGTDPSAASQGLVPNKFQGTIPGTKSTPFVVAQAPMPVAAESLEVKHLDYDDLHVTQGIRE 1146
I+ G S N+++FI+ +L+ R DGR + R LR+ +ARAEGQA+AEIQLG+TRVL VVT EL PP+PDRP EGFL+ NVE PMA G R +P VE+ RVIE +R S+ALDTEALCVI G KVW LRCDV +LD GN++DA LAT+AAL HFR P+VT+ DG ++V+VHH+ +KEP L +HHVPICVTF +F ++ + +DPTE EE VM GRITF++ H+E+CA+ K GG+A+ ++ A +A KV + H +L +L AD++A +R +RGT +G + G G + V A P + +E HLD+ +LH +RE
Sbjct: 4 IKQGEDMSINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESSVGRVRGGGGLGHASVVVHHSFEKEPSALPIHHVPICVTFVLF--------------------------------NTSPIVSVIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQTSLEAADSQAKAERLRCVRGTASMHVRRGAL-----GDAEGERGEKEVEGGADAPTS--HIETAHLDFAELHAPIKVRE 375
BLAST of mRNA_D-herbacea_M_contig94.15955.1 vs. uniprot
Match: A0A7S1CIZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIZ9_9STRA) HSP 1 Score: 258 bits (659), Expect = 2.700e-79 Identity = 133/274 (48.54%), Postives = 177/274 (64.60%), Query Frame = 1
Query: 37 DQDFIIRSLRSGRRVDGRKLGEMRLLRMVFARAEGQASAEIQLGRTRVLAVVTGELVPPFPDRPTEGFLHFNVELGPMAAPG--AGERNSPVTVEIARVIEIGVRDSQALDTEALCVIGGEKVWQLRCDVHVLDHGGNLIDACTLATMAALRHFRRPDVTIDGSNVLVHHTDDKEPHPLALHHVPICVTFAIFEDAGDAMLGRPGGXXXXXXXXGVGGMSGAGASSSKKQHTAVDPTEVEEEVMKGRITFALTAHKELCALHKNGGVAITRDTI 852
++DFI +LRSGRRVDGR L + R + F R + +AE++LG+TRV+ V T E+VPP+PDRPTEGFL FNVEL PMA+ AG R SP+ VEI R++E +RD++A+DTEALC++ GEKVW LRCDV V+D GGN+IDA L+ +A+L HFRR DV++ G V +H DD+ P PL++HH P+C+TF +F D + VDPT+ EE M GR+TFAL AH ELC +HK GG A++ D +
Sbjct: 7 ERDFIHHALRSGRRVDGRGLLDRRRVAFKFDRTAARTTAEVRLGKTRVVTVTTAEVVPPYPDRPTEGFLMFNVELSPMASEKFEAG-RPSPLAVEIGRIVERCLRDARAIDTEALCIVAGEKVWSLRCDVRVVDDGGNIIDAAALSAVASLCHFRRADVSVSGDRVTIHSFDDRVPVPLSVHHKPMCITFGVFRDG---------------------------------ETVCVDPTDREELTMDGRVTFALNAHSELCLVHKLGGTALSPDEL 246
BLAST of mRNA_D-herbacea_M_contig94.15955.1 vs. uniprot
Match: K3X4Z2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4Z2_GLOUD) HSP 1 Score: 266 bits (681), Expect = 3.110e-79 Identity = 144/339 (42.48%), Postives = 209/339 (61.65%), Query Frame = 1
Query: 28 SKNDQDFIIRSLRSGR--RVDGRKLGEMRLLRMVFARAEGQASAEIQLGRTRVLAVVTGELVPPFPDRPTEGFLHFNVELGPMAAPGAGE-RNSPVTVEIARVIEIGVRDSQALDTEALCVIGGEKVWQLRCDVHVLDHGGNLIDACTLATMAALRHFRRPDVTIDGSNVLVHHTDDKEPHPLALHHVPICVTFAIFE--DAGDAMLGRPGGXXXXXXXXGVGGMSGAGASSSKKQHTAVDPTEVEEEVMKGRITFALTAHKELCALHKNGGVAITRDTILGCARLAAVKVEEIHKVLDEALAGADAKAVLDRQGRLRGTD---------PSAASQGLV 1002
S+N++ F+ S+ R DGR+L R +R+ F R E Q+ AE+QLGRTRV+A V GE+VPPFPDRPTEGFLHFNVEL PMA+ R SP+ VE+AR+++ G+R+ +ALDTEAL +I GEKVW + C++HV+DHGGNLID +LA +AA+ H+RRP++++ ++ +V++ D+ PL+LHH+PI ++F E D G+ ++ +DPT+ EE + G +TF + +ELCA+HK GG AI+ +L CA +AA +V E+ ++L E AD A+ R+ LRG D PSAA+Q +
Sbjct: 11 SENERKFLFDSIHDAPHVRADGRELMHQRKIRVQFRRTEEQSQAEVQLGRTRVIANVHGEIVPPFPDRPTEGFLHFNVELSPMASQNFEVGRPSPMAVELARIVDRGIRECRALDTEALAIIAGEKVWAITCNIHVVDHGGNLIDCVSLAAIAAMMHYRRPEISVQKNSTIVYNIDEHAAVPLSLHHIPISISFCFIESRDQGEPII-------------------------------FMDPTDREERITDGSMTFTFNSFRELCAVHKIGGAAISTTEVLRCANVAAARVSELTEILKEEAEKADKIAIDQRRAFLRGRDFADVSSLSAPSAATQNRI 318
BLAST of mRNA_D-herbacea_M_contig94.15955.1 vs. uniprot
Match: A0A1Y2GNW0_9FUNG (Ribosomal protein S5 domain 2-type protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GNW0_9FUNG) HSP 1 Score: 258 bits (660), Expect = 5.110e-79 Identity = 134/304 (44.08%), Postives = 190/304 (62.50%), Query Frame = 1
Query: 28 SKNDQDFIIRSLRSGRRVDGRKLGEMRLLRMVFARAEGQASAEIQLGRTRVLAVVTGELVPPFPDRPTEGFLHFNVELGPMAAPGAGE-RNSPVTVEIARVIEIGVRDSQALDTEALCVIGGEKVWQLRCDVHVLDHGGNLIDACTLATMAALRHFRRPDVTIDGSNVLVHHTDDKEPHPLALHHVPICVTFAIFEDAGDAMLGRPGGXXXXXXXXGVGGMSGAGASSSKKQHTAVDPTEVEEEVMKGRITFALTAHKELCALHKNGGVAITRDTILGCARLAAVKVEEIHKVLDEALAGADAK 936
S N+++F++ +LR G R+DGR + R LR+ F G + E+QLG TRVLA V+ E++ PFPD+PTEGFL FN EL PMA+P R + V ++R+IE ++ S+ALDTE LC++ GEKVW +R D+H LDH GNL+DA +A + AL+HFRRPDVT+ G +V +H + + P PL++HH+PICVTFA F++ H VDPT +EE++ +G +T L HKE+CAL K GG+ + D I+ C+++A +KV EI ++ ALA ADAK
Sbjct: 7 STNEREFVLAALRDGARIDGRNFYDFRTLRLSFGADYG--AVEVQLGNTRVLAKVSCEVIRPFPDKPTEGFLMFNTELSPMASPAFEVGRQTDEEVLVSRLIEKAMKRSRALDTEGLCIVAGEKVWSIRVDIHFLDHDGNLVDAACIAAITALQHFRRPDVTVVGEDVTIHTLEQRNPVPLSIHHIPICVTFAFFDNG---------------------------------NHVIVDPTHLEEQIKEGDMTITLNVHKEVCALSKAGGIPMELDQIIQCSKIAVIKVAEITAQIEAALA-ADAK 274
BLAST of mRNA_D-herbacea_M_contig94.15955.1 vs. uniprot
Match: A0A8K1C7Y8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Y8_PYTOL) HSP 1 Score: 263 bits (673), Expect = 3.160e-78 Identity = 139/319 (43.57%), Postives = 199/319 (62.38%), Query Frame = 1
Query: 28 SKNDQDFIIRSLRSGR--RVDGRKLGEMRLLRMVFARAEGQASAEIQLGRTRVLAVVTGELVPPFPDRPTEGFLHFNVELGPMAAPGAGE-RNSPVTVEIARVIEIGVRDSQALDTEALCVIGGEKVWQLRCDVHVLDHGGNLIDACTLATMAALRHFRRPDVTIDGSNVLVHHTDDKEPHPLALHHVPICVTFAIFEDAGDAMLGRPGGXXXXXXXXGVGGMSGAGASSSKKQHTAVDPTEVEEEVMKGRITFALTAHKELCALHKNGGVAITRDTILGCARLAAVKVEEIHKVLDEALAGADAKAVLDRQGRLRGTD 975
S+N++ F+ S+ R DGR+L + R +R+ F R + Q+ AE+QLGRTRV+A V GE+VPPFPDRPTEGFLHF+VEL PMA+ R SP+ VE+AR+++ G+R+ +ALDTEAL ++ GEKVW + C++HV+DHGGNLID +LA +AA+ HFRRP+V++ G+ V+ DD PL+LHH+PI ++F ++ S S + +DPT+ EE + G +TF + +ELCA+HK GG AI+ +L CA +AA +V E+ L E AD +A+ R+ LRG D
Sbjct: 11 SENERKFLFDSIHDKPHIRADGRELMQQRKIRVQFRRMDDQSQAEVQLGRTRVIANVHGEIVPPFPDRPTEGFLHFSVELSPMASQNFEVGRPSPLAVELARIVDRGIRECRALDTEALAIVAGEKVWSITCNIHVVDHGGNLIDCVSLAAIAAMMHFRRPEVSVQGNATTVYRIDDHAAVPLSLHHIPISISFCFIQNK---------------------------ESDSAEPIIFMDPTDREERITDGSMTFTFNSFRELCAVHKIGGAAISTTEVLRCANIAAARVAELTDFLKEEADKADKEAIERRRTMLRGRD 302
BLAST of mRNA_D-herbacea_M_contig94.15955.1 vs. uniprot
Match: A0A2D4C8I4_PYTIN (Exosome complex exonuclease RRP45-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8I4_PYTIN) HSP 1 Score: 261 bits (666), Expect = 3.880e-77 Identity = 135/319 (42.32%), Postives = 197/319 (61.76%), Query Frame = 1
Query: 28 SKNDQDFIIRSLRSGRRV--DGRKLGEMRLLRMVFARAEGQASAEIQLGRTRVLAVVTGELVPPFPDRPTEGFLHFNVELGPMAAPGAGE-RNSPVTVEIARVIEIGVRDSQALDTEALCVIGGEKVWQLRCDVHVLDHGGNLIDACTLATMAALRHFRRPDVTIDGSNVLVHHTDDKEPHPLALHHVPICVTFAIFEDAGDAMLGRPGGXXXXXXXXGVGGMSGAGASSSKKQHTAVDPTEVEEEVMKGRITFALTAHKELCALHKNGGVAITRDTILGCARLAAVKVEEIHKVLDEALAGADAKAVLDRQGRLRGTD 975
S+N++ F+ S+ + DGR+L + R +R+ F R + Q+ AE+Q+GRTRV+A V GE+VPPFPDRPTEGFLHFNVEL PMA+ R SP+ +E+AR+++ G+R+ +ALDTEAL ++ GEKVW + C +HV+DHGGNLID +LA +AA+ H+RRP+V++ GS V+ D+ PL+LHH+PI ++F E D + + +DPT+ EE + G +TF + +ELCA+HK GG +I+ +L CA +AA +V E+ + L E AD +A R+ LRG D
Sbjct: 11 SENERAFLFHSIHDKPHIRPDGRELMQQRKIRVQFRRNDDQSQAEVQIGRTRVIANVHGEIVPPFPDRPTEGFLHFNVELSPMASQNFEVGRPSPLAIELARIVDRGIRECRALDTEALAIVAGEKVWSITCTIHVVDHGGNLIDCVSLAAIAAMMHYRRPEVSVQGSTTTVYRIDEHAAVPLSLHHIPISISFCFIERRDD---------------------------DTAEPIVFMDPTDREERITDGSMTFTFNSFRELCAVHKIGGASISTTEVLRCANIAAARVAELTEFLKEEAEKADKEATERRRALLRGRD 302
BLAST of mRNA_D-herbacea_M_contig94.15955.1 vs. uniprot
Match: A0A7S1XR09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XR09_9STRA) HSP 1 Score: 256 bits (655), Expect = 2.330e-76 Identity = 170/427 (39.81%), Postives = 222/427 (51.99%), Query Frame = 1
Query: 1 MSIRDGPSQSKNDQDFIIRSLRSGRRVDGRKLGEMRLLRMVFARAEGQASAEIQLGRTRVLAVVTGELVPPFPDRPTEGFLHFNVELGPMAAPG--AGERNSPVTVEIARVIEIGVRDSQALDTEALCVIGGEKVWQLRCDVHVLDHGGNLIDACTLATMAALRHFRRPDVTIDGSN--VLVHHTDDKEPHPLALHHVPICVTFAIF--EDAGDAMLGRPGGXXXXXXXXGVGGMSGAGASSSKKQHTAVDPTEVEEEVMKGRITFALTAHKELCALHKNGGVAITRDTILGCARLAAVKVEEIHKVLDEALAGADAKAVLDRQGRLRGTDPSAASQGLVPNKFQGTIPGTKSTPFVVAQAPMPVAAESLE-VKHLDYDDLHVTQGIREEGLRGGGNRGGRGLDMADARSTDLFAKMAKAASMTEAR 1260
MS+R+ + F++ L G RVDGR L R L + F R A AE+ LG TRV AVV GEL PFPDRP EGFL F VE + APG AG R P +EI R IE +R+S A+D EAL V+ GE+VW LRCDV VLDHGGNL DAC++A MAAL+H+R+P V +D ++ V V H D +EP PL LHH+P VTFA+ ED A + DP EE V +G +TF+L H+E+C LH GG+A+T++T+L A +AA K E+H + L AD + RLR + P + A+AP+ A+ E + HL YDDLHVT +R+E + DA L + +AA +TEAR
Sbjct: 1 MSLRETLDIPGVNDAFVLSCLSEGLRVDGRGLLARRSLSVKFRRGADAAGAELHLGDTRVSAVVAGELTQPFPDRPNEGFLTFAVEFSALGAPGFEAG-RPPPEALEICRYIERSIRESNAIDLEALAVVQGERVWSLRCDVVVLDHGGNLRDACSVAAMAALQHYRQPAVDVDDASRRVTVKHPDQEEPSPLPLHHIPYSVTFALIRAEDGEVAYV--------------------------------YDPELAEEHVAQGTLTFSLNKHREVCTLHFPGGLAVTKETLLEAADVAATKATELHDAVQRGLELADEDFKARQLERLRKSAPDQ----------------------IGAEAPLEGLAQGAEALSHLGYDDLHVTGTLRKEAEK---------TPEEDAGMAALLQSLERAADLTEAR 363
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 302.8 |
| Seed ortholog evalue | 3.4e-79 |
| Seed eggNOG ortholog | 2880.D7G4N5 |
| KEGG ko | ko:K03678,ko:K10397,ko:K12589 |
| KEGG Pathway | ko03018,map03018 |
| KEGG Module | M00390,M00391 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000175,GO:0000176,GO:0000177,GO:0000178,GO:0000184,GO:0000288,GO:0000291,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016075,GO:0016078,GO:0016180,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017091,GO:0019222,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0031974,GO:0031981,GO:0032991,GO:0034427,GO:0034470,GO:0034472,GO:0034473,GO:0034475,GO:0034476,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043628,GO:0043632,GO:0043633,GO:0043634,GO:0043928,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0070013,GO:0070478,GO:0070481,GO:0070651,GO:0071025,GO:0071027,GO:0071028,GO:0071029,GO:0071035,GO:0071038,GO:0071042,GO:0071046,GO:0071047,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1905354 |
| EggNOG free text desc. | U1 snRNA 3'-end processing |
| EggNOG OGs | COG2123@1,KOG1614@2759 |
| Ec32 ortholog description | Rrp45 is a component of the exosome 3'->5' exoribonuclease complex, a complex that degrades mRNAs. |
| Ec32 ortholog | Ec-17_001830.2 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03019,ko04812 |
| Exons | 10 |
| Model size | 1648 |
| Cds size | 1647 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622935763.0690246-CDS-D-herbacea_M_contig94:641271..641713 | 1622935763.0690246-CDS-D-herbacea_M_contig94:641271..641713 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 641272..641713 - |
| 1690880693.657023-CDS-D-herbacea_M_contig94:641271..641713 | 1690880693.657023-CDS-D-herbacea_M_contig94:641271..641713 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 641272..641713 - |
| 1622935763.083712-CDS-D-herbacea_M_contig94:642382..642492 | 1622935763.083712-CDS-D-herbacea_M_contig94:642382..642492 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 642383..642492 - |
| 1690880693.6689599-CDS-D-herbacea_M_contig94:642382..642492 | 1690880693.6689599-CDS-D-herbacea_M_contig94:642382..642492 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 642383..642492 - |
| 1622935763.1005983-CDS-D-herbacea_M_contig94:643381..643522 | 1622935763.1005983-CDS-D-herbacea_M_contig94:643381..643522 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 643382..643522 - |
| 1690880693.6825907-CDS-D-herbacea_M_contig94:643381..643522 | 1690880693.6825907-CDS-D-herbacea_M_contig94:643381..643522 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 643382..643522 - |
| 1622935763.1160154-CDS-D-herbacea_M_contig94:645310..645463 | 1622935763.1160154-CDS-D-herbacea_M_contig94:645310..645463 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 645311..645463 - |
| 1690880693.695779-CDS-D-herbacea_M_contig94:645310..645463 | 1690880693.695779-CDS-D-herbacea_M_contig94:645310..645463 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 645311..645463 - |
| 1622935763.1313863-CDS-D-herbacea_M_contig94:646477..646666 | 1622935763.1313863-CDS-D-herbacea_M_contig94:646477..646666 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 646478..646666 - |
| 1690880693.7086542-CDS-D-herbacea_M_contig94:646477..646666 | 1690880693.7086542-CDS-D-herbacea_M_contig94:646477..646666 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 646478..646666 - |
| 1622935763.151695-CDS-D-herbacea_M_contig94:646911..647021 | 1622935763.151695-CDS-D-herbacea_M_contig94:646911..647021 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 646912..647021 - |
| 1690880693.7192695-CDS-D-herbacea_M_contig94:646911..647021 | 1690880693.7192695-CDS-D-herbacea_M_contig94:646911..647021 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 646912..647021 - |
| 1622935763.1711247-CDS-D-herbacea_M_contig94:647849..647955 | 1622935763.1711247-CDS-D-herbacea_M_contig94:647849..647955 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 647850..647955 - |
| 1690880693.7311566-CDS-D-herbacea_M_contig94:647849..647955 | 1690880693.7311566-CDS-D-herbacea_M_contig94:647849..647955 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 647850..647955 - |
| 1622935763.1952097-CDS-D-herbacea_M_contig94:648994..649099 | 1622935763.1952097-CDS-D-herbacea_M_contig94:648994..649099 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 648995..649099 - |
| 1690880693.7452126-CDS-D-herbacea_M_contig94:648994..649099 | 1690880693.7452126-CDS-D-herbacea_M_contig94:648994..649099 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 648995..649099 - |
| 1622935763.214744-CDS-D-herbacea_M_contig94:649940..650030 | 1622935763.214744-CDS-D-herbacea_M_contig94:649940..650030 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 649941..650030 - |
| 1690880693.7558243-CDS-D-herbacea_M_contig94:649940..650030 | 1690880693.7558243-CDS-D-herbacea_M_contig94:649940..650030 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 649941..650030 - |
| 1622935763.2333012-CDS-D-herbacea_M_contig94:651168..651369 | 1622935763.2333012-CDS-D-herbacea_M_contig94:651168..651369 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 651169..651369 - |
| 1690880693.765824-CDS-D-herbacea_M_contig94:651168..651369 | 1690880693.765824-CDS-D-herbacea_M_contig94:651168..651369 | Desmarestia herbacea DmunM male | CDS | D-herbacea_M_contig94 651169..651369 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_M_contig94.15955.1 >prot_D-herbacea_M_contig94.15955.1 ID=prot_D-herbacea_M_contig94.15955.1|Name=mRNA_D-herbacea_M_contig94.15955.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=549bp
MSIRDGPSQSKNDQDFIIRSLRSGRRVDGRKLGEMRLLRMVFARAEGQAS AEIQLGRTRVLAVVTGELVPPFPDRPTEGFLHFNVELGPMAAPGAGERNS PVTVEIARVIEIGVRDSQALDTEALCVIGGEKVWQLRCDVHVLDHGGNLI DACTLATMAALRHFRRPDVTIDGSNVLVHHTDDKEPHPLALHHVPICVTF AIFEDAGDAMLGRPGGGGGGRSSKGVGGMSGAGASSSKKQHTAVDPTEVE EEVMKGRITFALTAHKELCALHKNGGVAITRDTILGCARLAAVKVEEIHK VLDEALAGADAKAVLDRQGRLRGTDPSAASQGLVPNKFQGTIPGTKSTPF VVAQAPMPVAAESLEVKHLDYDDLHVTQGIREEGLRGGGNRGGRGLDMAD ARSTDLFAKMAKAASMTEARISKEEQDADAVHPPKPLSGSSPPNRNRTAG AVAVGLDGGRGGGGIEQESGVRIHSKDSSEGRVNDAASREFARLAETLKS DSSRKASPPGAGGMSVDSDEEETTVKLEGEFKAAEGGGVKVETPAGGRG back to topmRNA from alignment at D-herbacea_M_contig94:641272..651369- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-herbacea_M_contig94.15955.1 ID=mRNA_D-herbacea_M_contig94.15955.1|Name=mRNA_D-herbacea_M_contig94.15955.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=10098bp|location=Sequence derived from alignment at D-herbacea_M_contig94:641272..651369- (Desmarestia herbacea DmunM male) ATGTCTATACGCGACGGACCGTCGCAGAGTAAGAATGACCAGGACTTTAT
CATTCGCTCCTTGAGGAGCGGGCGGCGAGTGGATGGGAGGAAGCTCGGCG
AGATGAGACTGTTGCGGATGGTGTTCGCGAGGGCTGAGGGCCAGGCGAGC
GCGGAGATACAGCTAGGGCGGACGCGCGTTCTGGCTGTCGTCACGGGCGA
GGTCGGTGCAAGCAAACCTTTCAGGGGCGTTTGTATGCATTTTTCGCTTT
TGATATTGCGAGTGCGCGTCGCTGGGGACGTCGTATGTTTGTCGAACCTA
AGAGCATGTTGCACGTTAGATTTGAATCGACTGTTATGATAGCACACACG
CCAACCAGAGAGCTTTGCTGGCCATTTGGCAAATGTGCTGTGGGCTGTGC
TGCACTCCTACTGCTATAAGACTGTGCTATCGTACGAGTACTGTTGTTGT
ACAGCTCGGTGCAAGTACAGTAGTAAGATAAATATGTGTGCTTGTGTCCA
TGCGGTTTGTGCACGTTTCCCTCTACAATTTCATTGCCGATGGCCTTCGC
TTGACGGCGTTGATGGTGGGTGCGTTGCCCTGTCATCGATAGGGTACGAG
TATGGTGAGAGATCGTAGTGATTGGAATTCCGCTGCTCGGTTGCTGCTGA
TTCGCTGTGGTACCGGCAAGCCTGTGCGATAGGTTTATCAATGCTTGCTT
GTTCGGTGCATAGACATAAGTGAACGAGGCGTAATAGTCGAGTACTGCTG
TTGTTGTTCCGCTGTGCTATCGACACTTTTGGCTGTGGACACGAAGTTAG
TGCTCGTCGCTGGCAATCAGGGGGATACACGACATATCGAGGGGAGCCGC
GGCGTTGTCCCTTTCTGAGGACGGATCCGCGCAACGGAAGTATCACAGAG
TGAAGTTGGCGATCATCCCATGGTTCTCGAACCAGTTTGTTTGGGACGTC
ACGGCTGATGTATTTGTAGTTATATAACTAGCAACTACACAATAGTGCAG
CATACTCGTAGAAGTGTGAAAAGAGGTTAGACGCGTGTAGTGCATGCATG
CATCGGACGTAGAATCGTCATGCATGATATGCAGCAATCGATGGCGAGTA
TTTCTAGATACAATAGTTTAAGTCTGAAGCTCAGCTCTTCTCTGTGTCTA
CAGTACCATCACCTCTATCGATGCATGCCGCATCAATATTATACTATGAT
ACGCATGATTCACCGCTGCGCTGCGACGAGAGCATTTTGATACTTGCTGC
ATGCTCGTTTATTGCGCCAAAAGGACCGTTGCGCCGCCCTGGCTAAAGTA
CCCCCGCAACACACCCGGCTGCCGCGTGCAACATGACAGCTCGTGCCCCC
GTTTCCGGATCGACCGACTGAGGGCTTTCTGCACTTCAACGTAGAGCTTG
GGCCGATGGCCGCTCCCGGCGCGGGCGAGGTGCTTTGTTGACATATGTCT
GGTCAATTTGTGCCGCTTGCTTGCTTGCTAAAATAATACGTACGAAGTAC
TACGGTAAATATTGCATCGTATTTCAAAAGTGCACGACAATGCGTGAGTG
TGATATGTTTGTTTACATCAGTTTTTCTTGTCCTGGTTTCTTCTTCGCGG
ACTGTTTTGAGTATTGAGGGCAACAGGCTTAGTAAGAATTGTGAACCAAT
ATCGTATCATCTCCCGCCCTCGAGGGGCAGTTATTCGTTCATTGTACGGA
GTATCACGGGGTGCCCCCTGCACCCTGTGCTCTGCTTGGTACCTCCCCCT
CCCCCGCGGCGGCGGTGGCACCCCCACTCCTCATGAAACATGTGCGTGAT
GTGCCTGGTGTCCCGGTGCAAGCGCTGAGCTTCACGGAGAGAGCAACATC
GCACTGTACTAGTGATAGTACCATGTATAGGGTGTGTCCTCGAGCTGGTA
TATTTTACGCAATCACTGTCGCTGTTTTGGTTAATCTGTAGGATGACCGC
TCCACGGCACCAAATTTAATGTTGGATGTTAACATCGACAAGAGAGGTGT
ACTCATGCACGCGCTCGCTTTCGTATAATGTTGGTGTTGTGTGCCTGTTG
TGCTCGTGCACTTGACAAGATATATGTATCTATCATAGATAATATGCTGC
GAGTAAGCAGTCGAGCGGGTTGTCAACCGTTTTTTTTGCGGAAATGAGCG
CACCTACTGCTGTTACGCTAACGCAAAGCTTGCCGCGTGCACCCCCACAC
CTGATCCAACTCGTTCATTTTTGGTGTTGTCTTTGTTCTGCTCTGTGCAA
TTGCCGCGATCTGAAACCAGCGAAACTCTCCCGTGACGGTGGAAATTGCG
CGGGTTATCGAAATCGGCGTTCGAGACTCCCAGGCCCTCGACACTGAAGC
GTTGTGCGTCATTGGGGGTGAAAAGGTAGGTAGGCCATTTGTCTCCTGAA
CCGTGCCCAAAATGTCCCTCTTGTTGCTACGCAGTATACATAGTGTTGTT
GCCCGGCGCAGCATGGTTGATTTTGGCGTGCGTTTTCAAGCGTACTGCGT
ACCAGGTACTCGTTTGGCGAACCCTGAGTGTACCGCTAGGCCGACATCCC
CCAGCGAATGGCGTGTCGAGATCTGAGTCCGCTGCGAAGATCTCTCCGAC
AAACGCAGTCCATTCCCAGGACTCTGTGCCTGATTGTTGCATCCGTATCC
GCTGTGAATTTGCATGTCTCCAGCCACTCGCAGTCTCCGACCACTTGTTG
TACCGTATGACGAATCACACATGCCGGAGCGTAGGAGCATTATTATTGTA
TCCACTCTTGTATGTGTGTGTTGCATGCAGGGCGGTGTAGGATAATCTTT
GGTGCGTTTTTACACGGCAATGGGGATTTGCTGTGCCGACTGATGAATGA
CGCGTTCTGTGTCTGTGCGCCACAGGAGCTATAAACGCGACTCACTGGTG
TTCACCTCCGAATTTTTGCTTGTTGCATTTCTACGTAGTTGCATCGGACA
ACCTGACTTTTTTTGTTTGTGTTTCTGTAGTTCGTCGTCATATTTTGTTA
CACGCTTGGACAGCCGTAATAAGTATTGAAAACGCACAATAACGACAATT
ACCGTGTGTCAAGATCGTGTCCCCGTAGAGTCATCATAGCCGTTTGCTGC
TTGAAGTCCTGTGCTGAGTAGATAGCCCAATGGTAGCAGGTTGTGTGATC
ATGATATCGGAGGCCACAAGTTATCGACCACGGACTGACCTCCTCACACT
TCAACAACATCGGGGCTTATACTGTATAGTAGCGACACGTCAGGTTTCCC
GGGCAAGACTGCGCTTCACAAGGGGGGTGATGATAGTATTATAGTGCTGG
GTGATCACGGACACGTCGCAACGTGTACACACGCAACTAGCTCTCTCTTC
CACAACTCCCATACCAAGACAAGTACTGCATCCTATTCACGCATGGTCCA
CACGTCTGCTGCAGGTGTGGCAGTTGCGCTGCGACGTGCACGTCCTTGAT
CACGGCGGGAACTTGATAGACGCGTGCACCCTGGCCACGATGGCGGCCCT
TCGGCATTTCCGGCGGCCAGGTATGACGATGAGCGCGGCAAGGCAAAAGG
CGTTAACGGGGTTTCGTTGAGGGGGTGGGAGGCAGGGGGCGGTAGACGAT
GATGATCGGAAACAAGACTGAGACTGCGCGTTTGCCAGAACGGGCAAGGC
AGCGAAGTGTGCATGCAGACCCCCGTGTTGCAGCGCACAACCTGTGCCCC
GCCTTCACGTGGAGAGCTGGAGACAGTTGCTATTCCCAAGCACAGTGGAG
TCTCATATACATATGCAGAGCTGCCTGATTAACGGCTTGACTTAAGTGAT
CATAACCCCCACTCCCCAGCAGACTGACCTGTATAAGCGGTAGGTCTAAG
GCCATAAGGTACAGTAAAACATCGTGGGCAAAAAACGGAAATGGAAGATA
ATCACGTACTTCGGATATTAGCTCTAAAGAGCTGAAAGCCGTCTTACAAA
AAGAGCTACGAAGTACGACACCTAAACATAACACACACACGCAAACACGT
GGGAGATATATCTCAAGACTTTTTGTGGCCTCCTTCACCTGTTTCGTATT
TTGTTTCCCATCTCTTATCGAGGTTTCGCGCATTCTAACACTGCTGTTTC
TACTGTCAAACGTCGAACACGGACGTGAGGGTGTTGGATGCGAAAGGCTC
GATCGGGGCAGGCTTATCATGCGGGCCATAGATTACTTTGGAGCGCCTCC
GTTAGCACGGACTTGGGGCGTGTCTGAATGAGCACACACCAGAATGCCCC
CACCAACAGCTCACGGTGCCATGCGCTGCGTTTTTACGTTACTGTATGAT
ATCTGACCCGTGCGCCCTTTTGCTTTGCGTCTTCTGTGTTTGCTGTAGAT
GTGACGATCGACGGGTCTAACGTGCTGGTGCACCACACGGACGACAAGGA
GCCGCATCCGCTGGCCCTCCATCACGTACCCATCTGCGTCACGTTCGCTA
TTTTTGAGGTGTGTTTGTTTGTGGCAAGAGGTTTTTTTGCTTTGTGCCTC
GGAACAAGAAGAGGGCACCCTTTCTTTTCGAATAATATATTGCCACAAAA
CTTGAAACCCATTTTTTTTTTTCCTGGTGCGTTGTTTATTGTGTGTGTGT
GTTTTTTTTGTATTTTCTTTCACTGTGTGCGCGTGTGTAATTTTGTTTTT
TGCAGCTGACCTTAAAAAAACTTACCTTGTCTTGCACGCCTTTTTAATTG
TAGGACGCGGGGGATGCGATGCTAGGGCGGCCCGGCGGAGGCGGAGGCGG
CCGCTCGAGCAAAGGTGTGGGAGGCATGTCTGGAGCGGGGGCGAGTTCTT
CCAAGAAGCAGCACACTGCTGTGGATCCTACGGAGGTTGAGGAGGAAGTC
ATGAAGGGCAGGATCACGTTCGCGTTGACAGCGCACAAGGAGGTGGGAAA
AGGATGATTTTTGTTTTTGCTGTTATGGCCTGGCATGGTATGGCGTGGGG
TTGGTTGTCAGGGTGCGCTATTATAAGGCTTGTCGGAAAATGCGGCAGAC
GTTCCATGTAGCTGGTGGGTGTTGACGAACGCTGTTTTGTTGGCTTGCTT
GTATGGCATATTGATGGTAGGAGCCGCTCTAACGTTTTGGTAGCTCGGAT
CTTTGGGGTGTTCGTTTTATTAGATTTATGATTGGTGACAACGTGGGATG
TTAAGCAGTGTCGAAAAATCGATCACTGACCCTAACCCGAACACTACGTA
GTACGTACTGCACGCGCACTATAATAATAGAGAGTCAAAGCCTCTCTGAA
GATCCGAGCTACAAGAGTGCTATACCTACCGGATGGTAGTGCTGCTGTTT
TTTGTGTGGTCTTGACCTTGTTGTCTGCGAATTATGTCCGCTTTTTCTGA
TCGATGTTTGGTTGTTTGAGCGGCCGTCGGCTTCGTAGTCTTACAGTGTC
TGGCAGGATAGAATTCGGACTCACGTGTGGGATCCATTGCGCTTGTTGTA
GTAGCAACATGTAAGGAGCGCTGCTGTATACGTAAAAACTGGGTCTTAGC
GTTGTGTTCGTTTTTGCTATGTGGTTGAGTGTGGTGACGCGTAGAACATG
TTGCCTGTTGTGGCGCATATTTGTGTGTGTTTTGGCGTTAGTTGAGTGTG
TCTTGGCGACGGAAATAACATTGCCTGCTTTGGCGCACGTCAGATAGACG
ACGCCCCAAGCAAGCTGGTGCTACGTTCCGCGTGCACATGTTGGCCCGTC
GTTTCGGGGCCTTTTTGCGAGCTTTTTGTTTACATCGATCGTGGACATCA
CAGCGGACCGAAGAAGTTTCAGTTTCACACTAGTGCTATCGGACACTACT
GCCTGGCCCTTTTGATATTTCTACGGCGTCCTGCCATTCTCACACAACTC
TTGTTCTTATGCTGGTGTTGAAACTTGTTTTTTTTTATGTTAAATGGTAC
ACACAGCTGTGTGCGTTGCACAAGAACGGAGGCGTTGCCATCACCAGGGA
TACAATACTCGGCTGCGCCCGTCTGGCTGCGGTGAAAGTGGAGGAGATAC
ACAAGGTCTTGGACGAGGCCCTCGCCGGCGCGGATGCTAAGGCCGTGCTC
GATAGGCAGGTCAGTGGTTCCCTTAAGATACCACTCCGACGGTTTCAATA
ATTTATTGTTGTATTGTAGGAATAGAAACGATTTGGCAATGCAAAAGGTG
GTGGGCCGGCGGGGGGAGTGATCTGTTAAAGTAACGCCGTATCCACTGAG
TTTCCAGTTAGCGCTGATTAGACGAATTTTCTACTGCCGCGTAAATTCCG
AGGTCCAGGCTTAACGGCCAAACGGGTCCGAGATTGTGTGTGTGTGTGCG
TGTGTGTTTTATCCTCCGGCGGATGGGTAGAAATGAAGCTTAATCCTCAC
AAATTTCGTCGGTTTTCTTTATTAAACTTTTTGAAGGTTCTTTCTTTTTT
TGTACCTGTAAGCTCTCTTTTTTTTGTATACTCGTATATATATATACCTA
CGGCATAACCACAGAGCTATCAGGCAGCGCTGAATCCGAGGCCCAGGTTT
AACAGTTAAATGTGGCCCGGATTGTGGTTTTGTTATAACCACGTCGAAAG
CACTGAGCTGTCATCAGGCAGCGCCGACTGGTTGCGTAATGGTTGTGGTG
TTTCTCTTAACACAAATCATGGTGGCGTATGCCATTGCCGTTAGCCATTG
TTGGCCTTGCACCTCTAGCACCTCTAACAGTAGACTGGCGGGGGAGCCAT
GCGACGATAGGGGCGCACCTAACTTTCCGAGGCTAACATTAGGAGCTCTC
TATGTATCATCCAAAACCCAACTTTGGCAAGTGTAGGTGCAACCCGATAA
ACTTACGAATCAAATTTTGCAACGCGACTGAGAGTTCGAAGATATCGGGT
AGTTCCTCAGTTGAGGAGGCTCATCAGTAAACAATTTGGGCCCATAAGTA
CCCCCCCTATCGTAGTATGGCTCGGAGCGGAGCGGTGTGCGGGTGTTTCG
CCTGGCCGGGCTGTGTTTCACCATGGTTGGTGATATTTCCAGCTCTGCCA
TCGTTGCCCATCATCCTTGGGTGTACTGATTGATGACAGCCATGGTCATT
CGCCGGTACGGAGGGGATGCGGGGAGAGTGTATATGTGGGTGTTTGTGTG
TGATGTCGGCTGTATGACGCCACAATCGCAGATTCAATTGTTACCATACA
GTATCCATGGGTGACGCTGTAACCTAAGCGGTTAGATTGTCGCCCCTGTT
GGCCGAAGTTCGGGGTTCAATTCCCCAAAAACGAAATGCCATTGTTATGT
GCCCATCTTCCGTCGCGGAAAGCGTGAGAGCGCGAGTAAGCACAATTGAT
TGGATGAAAGTCGATGAGCTACGGGAATGCCGAACCCTGTGCGCGACAAA
AACCGATAAAAACAATGGTTGGCATGTACCGGGGGGGGGAGAAGGGTAGA
CACCTGTGTCCAGACCACGGCTTGCTCGGACAGGAACAGAAGAGCTGAGC
GACAAGTAGAAGAGCTCCTGTATGCTGCGGATTCTAAAAGTGATTTAAAG
AAATAAAAGTACGCGCGCTATTTTAACCCAGCGATGTACGCACTCTTTTG
CAACGACGAGGGCAAAAGAGCTTGTGCGTACTGTTTATTGTGAAGGACTA
GATGCCGCAGTTGGCGCGGCACACGCGGATGATGGCAGCACCCCCCTCCC
TCAGGCAGGTGTGACTCTGTTACCGTGCCGATCACGATGTGCACTACTCT
CTCGTACTGGTACATGCTTGTTGCAACCATGATAGCACGACCTTGTCACA
ACGTGTCAACGCACACACACACCGCCTGGGCCGTCGCTTTACTTATCTCT
CCTCCCTCGGCTGTGTACGTCATTGCGCACGCGGTATTGTTTTGCAGGGA
CGGCTTCGTGGCACAGACCCCAGTGCGGCTAGCCAAGGACTGGTTCCGAA
TAAATTCCAGGGAACGATTCCCGGAACGAAGTCAACGCCCTTCGTGGTGG
CGCAAGCACCGATGCCTGTGGCCGCCGAGTCCTTGGAGGTGGGGATGGGT
TGCGAATTGTGTAATAAGGATGAAGCACGATATTGACCCCCCCCCCCTCC
TTGGTTTATGGTCATACCACTACGGCCATGCATGAAATGAGTACCCCCCC
CCGCGCCCTTAGTTGGCGTCGGTTGGCAACGACGCTGTAAAATACGCCAC
CTAAGGCACCCACGAGGCAGTTAGATAGTATACCTATGGCTGTCTCTGGA
AGTGGCCACACCAGAAAACAAACTGTTCATTCGAAGCTGTCATTTATATG
CGAGAAATCCGCCTCACAAGTGGTTCTTACTAGGATGCAGCTCACCCTTC
ATGCGAATCGCCGAACACCTCACGGCGCTTCGCGCGTGGTGCACGCGATG
TCTGCCTGGTCGGTGAAAACCCGACGTGCTCCGCCCCTGCATTGTAGGGA
TGCGAAGGTGTATGGTCATACGACTGCGGCCATGCATGAAATGAATACCC
CCCCGAGTCGCCCCCCCTTTAAGATAAGGGGTCCGTTCCGTCTGTAGTGA
CTGTGTCTGACATATCTGCTCCTTTTTCTCACGGTATTTTTTTCTTTTGT
TTTTGTTTCGTTTGCGATTTGGTGCTCTAGGTACGTAGCTCTATGTAGCT
AGTGAGCACGGAATTTCGTGTCTCTCTATATGATTATAGAAGAATCAGGA
CAGACTCTTGAGTACGCTGTTGGATTTCGCTAGGGTAGAAATAACGTGTT
TTTTATGTGAAGACAACAACAATAAGATGGGAGAATGCTCTACCCCCCCC
CGTCTCGAAAGGGATGCGTGGTCAATGGTCAAATGACTAAGGCAAGCAAC
AAATGAGTACGCCCCGCCCCCCCTCCCTCCCCCGTGTCCGTTGCTGTGAT
CGTGATCGTGGCGTGGTCATCGTCCAGGTGAAGCACCTGGATTACGACGA
CCTTCACGTGACGCAGGGCATCCGCGAAGAGGGACTGAGGGGCGGGGGCA
ACCGCGGTGGACGCGGTCTAGACATGGCCGATGCAAGGTGGGACCTTTTT
TTTTATCATACAGTAGTAATGAGACGTGCACGGAGTCTTTCGTTATCATA
GAATGCATACTCGTAGTACATGGCGGCAGCTGTGTTCTACAATGGCTGAT
GTTAAAGCCGCTCACGATGCGGCTCTCGAAAGCCGCGGAATTTTTGGGGG
CTTAAACTTTTGTGTTTACCCGTCCGACGGAGGATAAAAAAAGAAAAAGT
TTGTTGGATGGTGTTATAGAGGCGGTGACAGGGAGGTACTTGTAGCTCTG
AGGCATCTTGTTCGCCGCGGCTGGTGGCATGTTCTGCGCTCTGTTGGTAC
GCCGTAACGTTTTTGCGTCGAGCAAACGTCAGCCCGGGGTGCCCTATAGA
CAGCACAAATAAACACGCACGTTCGTATTTAGAGGTACTTCCGTATAATA
TGTGTTCCCTGTGGATCGTTATGGTGCACGGCTGTCTCATTCCGCATCGT
TATCATTTCGTAGTTTTGTACTACTATGGACTGCCGTTTTTTTTGCTTTC
TCCACTTGCATCTTATCGGTCCGCATTTCCTACTTGTGTCTTGTCTGTTG
TGCCATCCTCTTAACTGGTCGTTTCCGGTATTTTGCTTGCCTCCATCCTT
CCGTTCGCGGGGTTTGATGGATTGTATGGCCTTTTATTTTGTATCCCCCT
TTTCAGGAGCACCGACCTGTTCGCCAAGATGGCGAAAGCAGCAAGCATGA
CAGAGGCGAGGATCTCTAAGGAGGAACAAGATGCCGACGCGGTGCACCCG
CCTAAACCATTGTCGGGGTCGTCGCCTCCAAATCGAAACCGGACTGCGGG
GGCAGTAGCAGTGGGGCTAGACGGGGGTAGAGGTGGCGGCGGCATCGAGC
AAGAGAGTGGAGTTCGAATACATTCGAAGGATTCCAGTGAAGGGCGCGTG
AATGACGCTGCGAGTCGTGAGTTTGCGCGCTTGGCTGAGACTCTGAAGTC
GGACAGTAGTAGGAAGGCTAGTCCACCAGGGGCGGGGGGTATGAGCGTGG
ACTCTGACGAGGAAGAGACTACTGTTAAGCTCGAGGGGGAGTTCAAAGCG
GCCGAGGGAGGCGGTGTTAAGGTTGAGACGCCAGCAGGAGGGAGGGGT back to topCoding sequence (CDS) from alignment at D-herbacea_M_contig94:641272..651369- >mRNA_D-herbacea_M_contig94.15955.1 ID=mRNA_D-herbacea_M_contig94.15955.1|Name=mRNA_D-herbacea_M_contig94.15955.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=3294bp|location=Sequence derived from alignment at D-herbacea_M_contig94:641272..651369- (Desmarestia herbacea DmunM male) ATGTCTATACGCGACGGACCGTCGCAGAGTAAGAATGACCAGGACTTTAT CATTCGCTCCTTGAGGAGCGGGCGGCGAGTGGATGGGAGGAAGCTCGGCG AGATGAGACTGTTGCGGATGGTGTTCGCGAGGGCTGAGGGCCAGGCGAGC GCGGAGATACAGCTAGGGCGGACGCGCGTTCTGGCTGTCGTCACGGGCGA GATGTCTATACGCGACGGACCGTCGCAGAGTAAGAATGACCAGGACTTTA TCATTCGCTCCTTGAGGAGCGGGCGGCGAGTGGATGGGAGGAAGCTCGGC GAGATGAGACTGTTGCGGATGGTGTTCGCGAGGGCTGAGGGCCAGGCGAG CGCGGAGATACAGCTAGGGCGGACGCGCGTTCTGGCTGTCGTCACGGGCG AGCTCGTGCCCCCGTTTCCGGATCGACCGACTGAGGGCTTTCTGCACTTC AACGTAGAGCTTGGGCCGATGGCCGCTCCCGGCGCGGGCGAGCTCGTGCC CCCGTTTCCGGATCGACCGACTGAGGGCTTTCTGCACTTCAACGTAGAGC TTGGGCCGATGGCCGCTCCCGGCGCGGGCGAGCGAAACTCTCCCGTGACG GTGGAAATTGCGCGGGTTATCGAAATCGGCGTTCGAGACTCCCAGGCCCT CGACACTGAAGCGTTGTGCGTCATTGGGGGTGAAAAGCGAAACTCTCCCG TGACGGTGGAAATTGCGCGGGTTATCGAAATCGGCGTTCGAGACTCCCAG GCCCTCGACACTGAAGCGTTGTGCGTCATTGGGGGTGAAAAGGTGTGGCA GTTGCGCTGCGACGTGCACGTCCTTGATCACGGCGGGAACTTGATAGACG CGTGCACCCTGGCCACGATGGCGGCCCTTCGGCATTTCCGGCGGCCAGGT GTGGCAGTTGCGCTGCGACGTGCACGTCCTTGATCACGGCGGGAACTTGA TAGACGCGTGCACCCTGGCCACGATGGCGGCCCTTCGGCATTTCCGGCGG CCAGATGTGACGATCGACGGGTCTAACGTGCTGGTGCACCACACGGACGA CAAGGAGCCGCATCCGCTGGCCCTCCATCACGTACCCATCTGCGTCACGT TCGCTATTTTTGAGATGTGACGATCGACGGGTCTAACGTGCTGGTGCACC ACACGGACGACAAGGAGCCGCATCCGCTGGCCCTCCATCACGTACCCATC TGCGTCACGTTCGCTATTTTTGAGGACGCGGGGGATGCGATGCTAGGGCG GCCCGGCGGAGGCGGAGGCGGCCGCTCGAGCAAAGGTGTGGGAGGCATGT CTGGAGCGGGGGCGAGTTCTTCCAAGAAGCAGCACACTGCTGTGGATCCT ACGGAGGTTGAGGAGGAAGTCATGAAGGGCAGGATCACGTTCGCGTTGAC AGCGCACAAGGAGGACGCGGGGGATGCGATGCTAGGGCGGCCCGGCGGAG GCGGAGGCGGCCGCTCGAGCAAAGGTGTGGGAGGCATGTCTGGAGCGGGG GCGAGTTCTTCCAAGAAGCAGCACACTGCTGTGGATCCTACGGAGGTTGA GGAGGAAGTCATGAAGGGCAGGATCACGTTCGCGTTGACAGCGCACAAGG AGCTGTGTGCGTTGCACAAGAACGGAGGCGTTGCCATCACCAGGGATACA ATACTCGGCTGCGCCCGTCTGGCTGCGGTGAAAGTGGAGGAGATACACAA GGTCTTGGACGAGGCCCTCGCCGGCGCGGATGCTAAGGCCGTGCTCGATA GGCAGCTGTGTGCGTTGCACAAGAACGGAGGCGTTGCCATCACCAGGGAT ACAATACTCGGCTGCGCCCGTCTGGCTGCGGTGAAAGTGGAGGAGATACA CAAGGTCTTGGACGAGGCCCTCGCCGGCGCGGATGCTAAGGCCGTGCTCG ATAGGCAGGGACGGCTTCGTGGCACAGACCCCAGTGCGGCTAGCCAAGGA CTGGTTCCGAATAAATTCCAGGGAACGATTCCCGGAACGAAGTCAACGCC CTTCGTGGTGGCGCAAGCACCGATGCCTGTGGCCGCCGAGTCCTTGGAGG GACGGCTTCGTGGCACAGACCCCAGTGCGGCTAGCCAAGGACTGGTTCCG AATAAATTCCAGGGAACGATTCCCGGAACGAAGTCAACGCCCTTCGTGGT GGCGCAAGCACCGATGCCTGTGGCCGCCGAGTCCTTGGAGGTGAAGCACC TGGATTACGACGACCTTCACGTGACGCAGGGCATCCGCGAAGAGGGACTG AGGGGCGGGGGCAACCGCGGTGGACGCGGTCTAGACATGGCCGATGCAAG GTGAAGCACCTGGATTACGACGACCTTCACGTGACGCAGGGCATCCGCGA AGAGGGACTGAGGGGCGGGGGCAACCGCGGTGGACGCGGTCTAGACATGG CCGATGCAAGGAGCACCGACCTGTTCGCCAAGATGGCGAAAGCAGCAAGC ATGACAGAGGCGAGGATCTCTAAGGAGGAACAAGATGCCGACGCGGTGCA CCCGCCTAAACCATTGTCGGGGTCGTCGCCTCCAAATCGAAACCGGACTG CGGGGGCAGTAGCAGTGGGGCTAGACGGGGGTAGAGGTGGCGGCGGCATC GAGCAAGAGAGTGGAGTTCGAATACATTCGAAGGATTCCAGTGAAGGGCG CGTGAATGACGCTGCGAGTCGTGAGTTTGCGCGCTTGGCTGAGACTCTGA AGTCGGACAGTAGTAGGAAGGCTAGTCCACCAGGGGCGGGGGGTATGAGC GTGGACTCTGACGAGGAAGAGACTACTGTTAAGCTCGAGGGGGAGTTCAA AGCGGCCGAGGGAGGCGGTGTTAAGGTTGAGACGCCAGCAGGAGGGAGGG GTGAGCACCGACCTGTTCGCCAAGATGGCGAAAGCAGCAAGCATGACAGA GGCGAGGATCTCTAAGGAGGAACAAGATGCCGACGCGGTGCACCCGCCTA AACCATTGTCGGGGTCGTCGCCTCCAAATCGAAACCGGACTGCGGGGGCA GTAGCAGTGGGGCTAGACGGGGGTAGAGGTGGCGGCGGCATCGAGCAAGA GAGTGGAGTTCGAATACATTCGAAGGATTCCAGTGAAGGGCGCGTGAATG ACGCTGCGAGTCGTGAGTTTGCGCGCTTGGCTGAGACTCTGAAGTCGGAC AGTAGTAGGAAGGCTAGTCCACCAGGGGCGGGGGGTATGAGCGTGGACTC TGACGAGGAAGAGACTACTGTTAAGCTCGAGGGGGAGTTCAAAGCGGCCG AGGGAGGCGGTGTTAAGGTTGAGACGCCAGCAGGAGGGAGGGGT back to top
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