mRNA_D-herbacea_M_contig94.15952.1 (mRNA) Desmarestia herbacea DmunM male
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Overview
Homology
BLAST of mRNA_D-herbacea_M_contig94.15952.1 vs. uniprot
Match: D7FKW5_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW5_ECTSI) HSP 1 Score: 146 bits (369), Expect = 5.430e-35 Identity = 123/254 (48.43%), Postives = 144/254 (56.69%), Query Frame = 3
Query: 720 VPERRKSERLSAMPKDTTEKIAGGKTPRLVKGCSTFVTKRPTVDASSRFERAHQNMFAAQQSIERYATKTPKKGGGGKENTAAGRPSASKGTASRSKPAPRAPMNTPGCPTALAFGSGVKSGARGTTVASKPCTLVVQRSKKKPTQVKEFRLSSN-TNRREGFAFKPYSGPVRPIASALAALADKTPNPNVRSSETSSASLQGPHNSSKAAPRRRHPIKAELAAGKSQTARRLAHQQSGKNQRANKMAEGRATR 1478
V ERRKSER+SA K+T G+TP+ K K P + RFERAHQN+FA+Q SIERY KTPKK KEN + A TA P P P+ P+ A S VK RG TVASKPCTLVVQRS KKPTQVKEFRLSSN T +RE F FKPY+GP+RPI A N S A +G + P R IKA LA+GK+Q AR+ AH +S K QR K+A+ R R
Sbjct: 137 VAERRKSERVSATMKETR---TTGETPQKTK------VKLPV---AGRFERAHQNLFASQASIERYG-KTPKKSAPAKENAPLSKTKAFASTAKVFAPTPVRPV-----PSGSAAKSSVK---RGLTVASKPCTLVVQRSTKKPTQVKEFRLSSNQTGKRETFTFKPYTGPLRPIVPA-----------NNSSFNIGHAPKKGSN------PVRAKGIKATLASGKAQKARKEAHVESSKAQRDRKLADARFGR 352
BLAST of mRNA_D-herbacea_M_contig94.15952.1 vs. uniprot
Match: A0A6H5K5M9_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5M9_9PHAE) HSP 1 Score: 132 bits (332), Expect = 4.670e-30 Identity = 110/243 (45.27%), Postives = 132/243 (54.32%), Query Frame = 3
Query: 765 DTTEKIAGGKTPRLVKGCSTFVTKRPT---VDASSRFERAHQNMFAAQQSIERYATKTPKKGGGGKENTAAGRPSASKGTASRSKPAPRAPMNTPGCPTALAFGSGVKSGA-RGTTVASKPCTLVVQRSKKKPTQVKEFRLSSN-TNRREGFAFKPYSGPVRPIASALAALADKTPNPNVRSSETSSASLQGPHNSSKAAPRRRHPIKAELAAGKSQTARRLAHQQSGKNQRANKMAEGRATR 1478
D E+ G + + +T T + T + + RFERAHQ++FA+Q SIERY KTPKK K N + AS A P P+++ GSG KS RG TVAS PCTLVVQRS KKPTQVKEFRLSSN T +RE F FKPY+GP+RPI SA N S A +G + P R IKA LA+GK Q ARR AH +S K QR K+AE R R
Sbjct: 136 DVAERCKSGNYATIKETRTTGGTPQKTKVKLPVAGRFERAHQSLFASQASIERYG-KTPKKSAPAKGNVPLSKTKASAPKAKVFASTPVRPVDS---------GSGAKSSVKRGLTVASMPCTLVVQRSTKKPTQVKEFRLSSNQTGKRETFTFKPYTGPLRPIVSA-----------NNYSFNIGHAPKKGSN------PVRPKGIKATLASGKGQKARREAHVESSKAQRDRKLAEARCGR 351 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig94.15952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_M_contig94.15952.1 >prot_D-herbacea_M_contig94.15952.1 ID=prot_D-herbacea_M_contig94.15952.1|Name=mRNA_D-herbacea_M_contig94.15952.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=453bp MDVNEDKETHETLQALTYKALQALAKKRGVKANLSKGLLIERLLAAECTPback to top mRNA from alignment at D-herbacea_M_contig94:617765..624502- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_M_contig94.15952.1 ID=mRNA_D-herbacea_M_contig94.15952.1|Name=mRNA_D-herbacea_M_contig94.15952.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=6738bp|location=Sequence derived from alignment at D-herbacea_M_contig94:617765..624502- (Desmarestia herbacea DmunM male)back to top Coding sequence (CDS) from alignment at D-herbacea_M_contig94:617765..624502- >mRNA_D-herbacea_M_contig94.15952.1 ID=mRNA_D-herbacea_M_contig94.15952.1|Name=mRNA_D-herbacea_M_contig94.15952.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=2718bp|location=Sequence derived from alignment at D-herbacea_M_contig94:617765..624502- (Desmarestia herbacea DmunM male)back to top |