mRNA_D-herbacea_M_contig94.15951.1 (mRNA) Desmarestia herbacea DmunM male
|
Overview
Homology
BLAST of mRNA_D-herbacea_M_contig94.15951.1 vs. uniprot
Match: A0A6H5KAY1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAY1_9PHAE) HSP 1 Score: 471 bits (1212), Expect = 1.390e-162 Identity = 245/285 (85.96%), Postives = 259/285 (90.88%), Query Frame = 2
Query: 158 AGRRWISLLCLLICVVPHKVVAASAGSTRGKSSAPAGGXXXRISXXXXDREGGGGAFSFVSGTVPKVTVDETVDSEEQDIREEQRRGRWSFGQDHDPVVSAIKSMKDLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIDEFNLLLEY 1012
AG +++LCLL+C + +A+ A R ++ AG XXX XXXX GGG FSFVSGTVPKVT+DETVDSEEQDIREEQRRGRWSFG DHDPVVSAI+SMKDLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVV+KLALPEPELQFSTNGDTSKGVVIGMGDVN+GI+EFNLLLEY
Sbjct: 20 AGEGAVAILCLLVCFAAREALASGASRGRAGGTSTAGXXXXXXXXXXXXXXGGG--FSFVSGTVPKVTLDETVDSEEQDIREEQRRGRWSFGHDHDPVVSAIQSMKDLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVSKLALPEPELQFSTNGDTSKGVVIGMGDVNLGIEEFNLLLEY 302
BLAST of mRNA_D-herbacea_M_contig94.15951.1 vs. uniprot
Match: A0A835Z0G9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0G9_9STRA) HSP 1 Score: 350 bits (899), Expect = 6.740e-116 Identity = 165/223 (73.99%), Postives = 201/223 (90.13%), Query Frame = 2
Query: 347 VPKVTVDET-VDSEEQDIREEQRRGRWSFGQDHDPVVSAIKSMKDLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIDEFNLLLEY 1012
VPKVTVDET V+S+++D R+ QR+GRW+F D DPVVS IKS+KDLFP+V +S +PTT+LKLRK PLKTV+TLGADYNT IG+WQFRS+WEDSIIGGRIS+AGRE+ML+KSWL+KVMDSEDVATRLKF+AA+NT+DWTAYAKFG RTERI+PLN+++GF L ++ PLDGN GHAKLEV+ +++LPEPEL+FST+GDTS GVV GMGD++IGIDE NLLLEY
Sbjct: 33 VPKVTVDETAVESDDEDHRDAQRKGRWTFVDDADPVVSVIKSVKDLFPHVSLSCEPTTTLKLRKIFTPLKTVVTLGADYNTNIGIWQFRSSWEDSIIGGRISVAGRELMLSKSWLIKVMDSEDVATRLKFKAAVNTKDWTAYAKFGLRTERIAPLNVREGFTLCRRLPLDGNRGHAKLEVLARVSLPEPELRFSTDGDTSHGVVAGMGDIHIGIDELNLLLEY 255
BLAST of mRNA_D-herbacea_M_contig94.15951.1 vs. uniprot
Match: A0A4D9CS25_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS25_9STRA) HSP 1 Score: 235 bits (600), Expect = 1.730e-70 Identity = 107/179 (59.78%), Postives = 138/179 (77.09%), Query Frame = 2
Query: 476 DLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIDEFNLLLEY 1012
DL P RV ++P T+LKLRKR YP KTV+ LGADYNTQIGVWQF+S+WED IIGGR+++ GRE+ +K+WL+ + D +D+ATRLKFRA I+T W +YA+ GFRTERI PLN+KDG L ++ PLDG GHAKLEV L LPEPE+++ST+ K +++G GD+ + IDE NL LEY
Sbjct: 115 DLIPRFRVKVEPLTTLKLRKRFYPFKTVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKGRELQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPEIEYSTD---KKRLIMGTGDILLSIDELNLCLEY 290
BLAST of mRNA_D-herbacea_M_contig94.15951.1 vs. uniprot
Match: A0A7S1BGQ1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BGQ1_9STRA) HSP 1 Score: 231 bits (588), Expect = 5.310e-69 Identity = 106/184 (57.61%), Postives = 142/184 (77.17%), Query Frame = 2
Query: 461 IKSMKDLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIDEFNLLLEY 1012
I +D FP ++V DP T+LKLRKR PLKTVLTLGAD+ TQ+GVWQF+S+WEDS+IGGR+++ GRE+ ++K+WLL V ED+ TRL+ RAA++ AYA+FGFRTER+SP+N+ +GF L K FPLDG+NGHAK+EV A PEPE+++ST+ S ++GMGDV + I+E NL+LEY
Sbjct: 88 IDGHRDKFPGLKVRTDPRTTLKLRKRFRPLKTVLTLGADFETQLGVWQFKSSWEDSLIGGRLTLNGRELQMSKTWLLSVGAVEDLVTRLRLRAAVDLATGKAYARFGFRTERLSPINVVEGFTLKKMFPLDGSNGHAKMEVRANFAFPEPEIEYSTDNKKS---LVGMGDVEVAIEELNLVLEY 268
BLAST of mRNA_D-herbacea_M_contig94.15951.1 vs. uniprot
Match: W7U3J5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3J5_9STRA) HSP 1 Score: 235 bits (600), Expect = 1.280e-68 Identity = 107/179 (59.78%), Postives = 138/179 (77.09%), Query Frame = 2
Query: 476 DLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIDEFNLLLEY 1012
DL P RV ++P T+LKLRKR YP KTV+ LGADYNTQIGVWQF+S+WED IIGGR+++ GRE+ +K+WL+ + D +D+ATRLKFRA I+T W +YA+ GFRTERI PLN+KDG L ++ PLDG GHAKLEV L LPEPE+++ST+ K +++G GD+ + IDE NL LEY
Sbjct: 264 DLIPRFRVKVEPLTTLKLRKRFYPFKTVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKGRELQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPEIEYSTD---KKRLIMGTGDILLSIDELNLCLEY 439
BLAST of mRNA_D-herbacea_M_contig94.15951.1 vs. uniprot
Match: B7G885_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G885_PHATC) HSP 1 Score: 226 bits (577), Expect = 2.490e-66 Identity = 101/177 (57.06%), Postives = 140/177 (79.10%), Query Frame = 2
Query: 482 FPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIDEFNLLLEY 1012
+P ++ ++PTT+LK+RK PLKTV+ LGAD+NTQ+GVWQFRS+WED+IIGG++++AGRE+ L+KSW L V ED+ TRL+FRAA++ + W AYA+ GFRTER+SP+N+ +GF L K+ PLDGN+GH KLEV ALPEPE+++ST S +IGMGD+ + I+E NL+L+Y
Sbjct: 174 WPKIQCRVEPTTTLKIRKTFRPLKTVVQLGADFNTQLGVWQFRSSWEDAIIGGKLTLAGRELQLSKSWQLSVGAVEDLVTRLRFRAAVDLQTWKAYARVGFRTERLSPINVMEGFTLLKQLPLDGNHGHVKLEVKANFALPEPEIEYSTETQRS---LIGMGDIEVNIEELNLVLDY 347
BLAST of mRNA_D-herbacea_M_contig94.15951.1 vs. uniprot
Match: A0A7S1TRT3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRT3_9STRA) HSP 1 Score: 224 bits (572), Expect = 5.040e-66 Identity = 98/183 (53.55%), Postives = 137/183 (74.86%), Query Frame = 2
Query: 464 KSMKDLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIDEFNLLLEY 1012
+S D FP VR +P+T+LKLRKR YPLKT LTLGADYNTQ+G+WQF S+WED IIGGR+S GRE+ L+K W+LK+ ++ D+ +L FRAA++T YAKFG+R E++ P+N+++G +K PLDG +GH KLEV K ALPEP++++S+ D+ +++GMGDV + + E NLL+EY
Sbjct: 131 RSWLDYFPRVRCHFEPSTTLKLRKRFYPLKTRLTLGADYNTQLGIWQFISSWEDQIIGGRLSFRGRELQLSKKWMLKIDEASDLIAKLTFRAALDTSTGATYAKFGWRFEKLEPINVREGIPWRQKLPLDGPDGHVKLEVRAKFALPEPDIEYSSTKDSEGSMIVGMGDVEVRVQELNLLMEY 313
BLAST of mRNA_D-herbacea_M_contig94.15951.1 vs. uniprot
Match: A0A7S1GJA6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJA6_CYCTE) HSP 1 Score: 221 bits (562), Expect = 2.510e-65 Identity = 101/203 (49.75%), Postives = 150/203 (73.89%), Query Frame = 2
Query: 425 SFGQDHDPVVSAIKSMKDL-------FPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIDEFNLLLEY 1012
+F + P + ++S+++ FP ++ +DPTT+LK++K PLKT++ LGA++NTQ+GVWQF+S+WED+IIGG++++AGRE+ LTKSW L + ED+ TRL+FRAA++ + AYA+ GFRTER+SP+N+ +GF L + PLDG NGH KL V KLALPEPE+++ST + S ++GMGD+ I ++E NLLL+Y
Sbjct: 55 AFNSKNQPQPTFVQSVQEWWSSNLPNFPKLQCRIDPTTTLKIQKTFRPLKTIVRLGAEFNTQLGVWQFKSSWEDAIIGGKLTLAGRELQLTKSWQLSMGPMEDLVTRLRFRAAVDLQTMKAYARVGFRTERLSPINMMEGFTLQHQIPLDGQNGHIKLGVKAKLALPEPEIEYSTENNRS---LVGMGDIEINVEELNLLLDY 254
BLAST of mRNA_D-herbacea_M_contig94.15951.1 vs. uniprot
Match: A0A7S2S8R8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S8R8_9STRA) HSP 1 Score: 219 bits (559), Expect = 3.660e-64 Identity = 98/177 (55.37%), Postives = 135/177 (76.27%), Query Frame = 2
Query: 482 FPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIDEFNLLLEY 1012
FP ++ ++P T+LK+RK PLKTV+ LGAD+NTQ+GVWQF+S+WEDS+IGG++++AGRE+ L+K+WLL V ED+ TRL+FRAA++ AYA+ GFRTER+SP+N+ +GF L K+ PLDG GH KLEV A PEPE+++ST + S +GMGD+ + IDE NLLL+Y
Sbjct: 135 FPKLQCRVEPNTTLKVRKTFRPLKTVIRLGADFNTQLGVWQFKSSWEDSLIGGKLTLAGREIQLSKTWLLSVGAVEDLVTRLRFRAAVDLGTMKAYARLGFRTERLSPINVVEGFTLMKQLPLDGTQGHVKLEVKANFAFPEPEIEYSTENNRS---FVGMGDIEVNIDELNLLLDY 308
BLAST of mRNA_D-herbacea_M_contig94.15951.1 vs. uniprot
Match: A0A1Z5JVG8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVG8_FISSO) HSP 1 Score: 213 bits (541), Expect = 1.830e-61 Identity = 99/188 (52.66%), Postives = 138/188 (73.40%), Query Frame = 2
Query: 449 VVSAIKSMKDLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIDEFNLLLEY 1012
+ ++KS +P + ++PTT+LKLRK PL T++ LGA++NTQ+ VWQF+S WED+IIGG++++AGRE+ LTKSW L V ED+ TRL+FRAA++ W AYA+ GFRTER+SP+NI +GF K+ PLDG +GH KL+V ALPEPE+++ST S +IGMGD+ + I+E NLLL+Y
Sbjct: 131 ISPSVKS----WPKIVCRVEPTTTLKLRKTFRPLGTIIRLGANFNTQLQVWQFKSDWEDAIIGGKLTLAGRELQLTKSWQLSVGAVEDLVTRLRFRAAVDLSTWKAYARVGFRTERLSPINIMEGFTFQKEVPLDGPSGHVKLQVKANFALPEPEIEYSTETQRS---LIGMGDIQVSIEELNLLLDY 311 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig94.15951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_M_contig94.15951.1 >prot_D-herbacea_M_contig94.15951.1 ID=prot_D-herbacea_M_contig94.15951.1|Name=mRNA_D-herbacea_M_contig94.15951.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=326bp MGKLAHSADGRPPLSYAVKGIFPQRRRRPSPSVQTREGVVAGRRWISLLCback to top mRNA from alignment at D-herbacea_M_contig94:610167..612817- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_M_contig94.15951.1 ID=mRNA_D-herbacea_M_contig94.15951.1|Name=mRNA_D-herbacea_M_contig94.15951.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=2651bp|location=Sequence derived from alignment at D-herbacea_M_contig94:610167..612817- (Desmarestia herbacea DmunM male)back to top Coding sequence (CDS) from alignment at D-herbacea_M_contig94:610167..612817- >mRNA_D-herbacea_M_contig94.15951.1 ID=mRNA_D-herbacea_M_contig94.15951.1|Name=mRNA_D-herbacea_M_contig94.15951.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1956bp|location=Sequence derived from alignment at D-herbacea_M_contig94:610167..612817- (Desmarestia herbacea DmunM male)back to top |