mRNA_D-herbacea_M_contig94.15937.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig94.15937.1
Unique NamemRNA_D-herbacea_M_contig94.15937.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
[Close]
BLAST of mRNA_D-herbacea_M_contig94.15937.1 vs. uniprot
Match: A0A6H5KD80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD80_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 2.380e-94
Identity = 149/281 (53.02%), Postives = 205/281 (72.95%), Query Frame = 2 
Query:  140 EAWRWQGWTSTDEFCEDGTIDSDDNIIILGASDGLSSVGS--DDTFESTLSGDFSAVKLDGSTGALLWTWTGTSSDDEADWMISADTDSSNDVVLGGFTKGSWASSFTNPENQRHLAAVKLDGATGEEIWRYQEVAPHSTVAEEDYIYYGSGTVFGVTVNGEDDVFLAGQIYGSLEFGEGDPGDSDYFLIKLDGATGDEIWTVQGGSNSSFDMSADMDIDFAGDLVAAGVTGNKTAWDIQAIKFSGDDGSMIWEYSSPSS-TRDFLYGVAVDDEGNVYVAG 973
            E WRW GWT++DE    G +DSD +++++G   G ++     DDTF    SGDF+AVKL+G++G +LWTWT +S   EAD  +++DTDS+NDV++GG T+G W+SS  N ++  HLAAVKLDG+TG+EIWRYQE  P S  + E + YYGSG+V GV V+G+D+ FLAGQ YGSL FGEGDPGDSD+F+IKLDG  G E+WTVQGG ++SFD   ++ +D  GDL+A G+ G++ A ++  +KFSG DG+++WEYS  +S T D    V VD + +VY+AG
Sbjct:   10 EVWRWDGWTTSDETLTHGAVDSDGDVVLVGTQ-GYAAAEDLVDDTFVDAYSGDFAAVKLEGASGEVLWTWTASSLGSEADVFLASDTDSNNDVIMGGTTEGYWSSS--NHDSVPHLAAVKLDGSTGDEIWRYQERPPDSYTSLESFFYYGSGSVLGVAVDGDDNCFLAGQTYGSLVFGEGDPGDSDFFVIKLDGTDGSEMWTVQGGESTSFDAFHNVKVDSGGDLIAVGIGGDEDAVNV-VVKFSGTDGAVLWEYSPVTSFTHDVPQSVDVDTQDDVYIAG 286
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BLAST of mRNA_D-herbacea_M_contig94.15937.1 vs. uniprot
Match: D7FKX8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKX8_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 1.010e-91
Identity = 147/281 (52.31%), Postives = 197/281 (70.11%), Query Frame = 2 
Query:  140 EAWRWQGWTSTDEFCEDGTIDSDDNIIILGASDGLSSVGS--DDTFESTLSGDFSAVKLDGSTGALLWTWTGTSSDDEADWMISADTDSSNDVVLGGFTKGSWASSFTNPENQRHLAAVKLDGATGEEIWRYQEVAPHSTVAEEDYIYYGSGTVFGVTVNGEDDVFLAGQIYGSLEFGEGDPGDSDYFLIKLDGATGDEIWTVQGGSNSSFDMSADMDIDFAGDLVAAGVTGNKTAWDIQAIKFSGDDGSMIWEYSS-PSSTRDFLYGVAVDDEGNVYVAG 973
            E WRW GWT+ DE   DG +D D N++++G S G ++     DDTF    SGDF+AVKL+G++G +LWTWT +S   EAD  ++ DTDS+ND+V+GG T+G W+SS  NP++  H+A VKLDG TG+EIWRYQE  P S  +   Y YYG G+V GV V+G+D+  L GQ YGSL +GEGDPGDSD+F+IKLDG  G EIWTVQGG ++SFD    + +D  GDL+  G+ G++ A ++  +KFSG DG+++WEYS   SST D    V VD + +VY+AG
Sbjct:   10 EVWRWDGWTTLDEHTNDGAVDLDGNVVLVG-SQGYAAAEDLLDDTFVDAYSGDFAAVKLEGASGEVLWTWTASSLGSEADMFLAVDTDSNNDIVMGGRTEGYWSSS--NPDSVAHIAVVKLDGGTGDEIWRYQEHPPDSYTSLGSYFYYGYGSVSGVAVDGDDNCLLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESASFDSLHHVKVDSGGDLIVVGIGGDEDAVNVVVVKFSGTDGAVLWEYSPVTSSTHDVPASVDVDTQDDVYIAG 287
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BLAST of mRNA_D-herbacea_M_contig94.15937.1 vs. uniprot
Match: D8LJC9_ECTSI (Fibronectin type III domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC9_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 3.730e-91
Identity = 144/280 (51.43%), Postives = 196/280 (70.00%), Query Frame = 2 
Query:  140 EAWRWQGWTSTDEFCEDGTIDSDDNIIILGASD-GLSSVGSDDTFESTLSGDFSAVKLDGSTGALLWTWTGTSSDDEADWMISADTDSSNDVVLGGFTKGSWASSFTNPENQRHLAAVKLDGATGEEIWRYQEVAPHSTVAEEDYIYYGSGTVFGVTVNGEDDVFLAGQIYGSLEFGEGDPGDSDYFLIKLDGATGDEIWTVQGGSNSSFDMSADMDIDFAGDLVAAGVTGNKTAWDIQAIKFSGDDGSMIWEYSS-PSSTRDFLYGVAVDDEGNVYVAG 973
            E WRW GWT+ DE   DG +D D N++++G+     +    DDTF    SGDF+AVKL+G++G +LWTWT +S   EAD  ++ DTDS+ND+V+GG T+G W+SS  NP+   H+A VKLDG TG+EIWRYQE  P S  +  + +Y+G G+V GV V+G+D+  L GQ YGSL +GEGDPGDSD+F+IKLDG  G EIWTVQGG ++SFD    + +D  GDL+A G+ G++ A ++  +KFSG DG+++WEYS   SST D    V VD + +VY+AG
Sbjct:   10 EVWRWDGWTTLDEHTNDGAVDLDGNVVLVGSQGYAAAEYTIDDTFVDAYSGDFAAVKLEGASGEVLWTWTASSLGSEADTFLAVDTDSNNDIVMGGRTEGYWSSS--NPDTTPHIAVVKLDGGTGDEIWRYQEHPPDSYTSWGNSVYHGLGSVSGVAVDGDDNCLLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESASFDSLHHVKVDSGGDLIAVGIGGDEDAVNVVVVKFSGTDGAVLWEYSPVTSSTHDVPASVDVDTQDDVYIAG 287
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BLAST of mRNA_D-herbacea_M_contig94.15937.1 vs. uniprot
Match: D8LJD0_ECTSI (Fibronectin type III domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD0_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 9.810e-84
Identity = 141/263 (53.61%), Postives = 187/263 (71.10%), Query Frame = 2 
Query:  215 IIILGASDGLSSVGS---------DDTFESTLSGDFSAVKLDGSTGALLWTWTGTSSDDEADWMISADTDSSNDVVLGGFTKGSWASSFTNPENQRHLAAVKLDGATGEEIWRYQEVAPHSTVAEEDYIYYGSGTVFGVTVNGEDDVFLAGQIYGSLEFGEGDPGDSDYFLIKLDGATGDEIWTVQGGSNSSFDMSADMDIDFAGDLVAAGVTGNKTAWDIQAIKFSGDDGSMIWEYSSPSS-TRDFLYGVAVDDEGNVYVAG 973
            ++ILG+S+ +              DDTFE   SGDF+AVKLDG++G LLWTWT +S    AD  ++ DTDS++DVV+GG T+G W+SS  NP++  HLAAVKLDG+TG+EIWRYQE  P +  +   Y YYGSG+V GV V+G+D+ FL GQ +GSL FGEGD GDSD+F+IKLDG  G EIWTVQGG ++S+D   D+ +D AGDLVA G+ G++ A ++  +KFSG DGS++WEYS  +S T D    V VD + +VY+AG
Sbjct:   31 LVILGSSESIQEASRGYAAAEDLLDDTFEDAYSGDFAAVKLDGASGDLLWTWTDSSLGSAADLFLAGDTDSNDDVVMGGRTEGYWSSS--NPDSVAHLAAVKLDGSTGDEIWRYQEHPPDTYTSLGSYFYYGSGSVTGVAVDGDDNCFLVGQTWGSLVFGEGDAGDSDFFVIKLDGTDGSEIWTVQGGESTSYDFFVDVKVDSAGDLVAIGIGGDEDAINVVVVKFSGIDGSILWEYSPVTSFTHDVPESVDVDTQDDVYLAG 291
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BLAST of mRNA_D-herbacea_M_contig94.15937.1 vs. uniprot
Match: A0A6H5JLD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD3_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 5.120e-66
Identity = 128/280 (45.71%), Postives = 168/280 (60.00%), Query Frame = 2 
Query:  140 EAWRWQGWTSTDEFCEDGTIDSDDNIIILGASDGLSSVGSDDTFESTLSGDFSAVKLDGSTGALLWTWTGTSSDDEADWMISADTDSSNDVVLGGFTKGSWASSFTNPENQRHLAAVKLDGATGEEIWRYQEVAPHSTVAEEDYIYYGSGTVFGVTVNGEDDVFLAGQIYGSLEFGEGDPGDSDYFLIKLDGATGDEIWTVQGGSNSSFDMSADMDIDFAGDLVAAGVTGNKTAWDIQ--AIKFSGDDGSMIWEYSSPSSTRDFLYGVAVDDEGNVYVAG 973
            E+WR+ GWT+  E    G +  D N+++ G S+GL+    DDT  ST S DFSAVKLDG +G  LWTW   SS   ADWM SA  DS+++V+LGGFT G W +S  N +  R +AAVKLDG  G E+WRYQ  A  S+        YG   V GV V+  D   L G  Y +L  G G PGD D+F IKLDG TG E+W VQGG   + +      +D +GDLVAAG   N+ A ++    +K SG DGS++WEY+  +++    + V +DD  +VYVAG
Sbjct:   12 ESWRYAGWTTAQESAAGGVVGGDGNLVLCGKSNGLAFNLDDDTATSTSSADFSAVKLDGDSGETLWTWVD-SSLQGADWMTSAGADSASNVILGGFTNGEWGTS--NLDGLRDIAAVKLDGEAGTEVWRYQAAASTSSFGG-----YGVSYVLGVAVDSTDHPVLVGTTYNNLVDGVGVPGDWDFFAIKLDGMTGGELWRVQGGVAFTREGLLGAKVDSSGDLVAAGYAANEDASELNFLVVKLSGSDGSVLWEYAPSAASGGVFHSVDLDDRNHVYVAG 283
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BLAST of mRNA_D-herbacea_M_contig94.15937.1 vs. uniprot
Match: D8LJD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD2_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 5.650e-38
Identity = 84/190 (44.21%), Postives = 112/190 (58.95%), Query Frame = 2 
Query:  410 VVLGGFTKGSWASSFTNPENQRHLAAVKLDGATGEEIWRYQEVAPHSTVAEEDYIYYGSGTVFGVTVNGEDDVFLAGQIYGSLEFGEGDPGDSDYFLIKLDGATGDEIWTVQGGSNSSFDMSADMDIDFAGDLVAAGVTGNKTAWDIQ--AIKFSGDDGSMIWEYSSPSSTRDFLYGVAVDDEGNVYVAG 973
            V+LGGFT G W +S  N +  R +AAVKLDG  G E+WRYQ  A  S+        YG   V GV V+  ++  L G  Y SL  G G PGD D+F IKLDG TG E+W VQGG   + +      +D +GDLVAAG   N+ A ++    +K SG DGS++WEY+  +++    + V +DD  +VYVAG
Sbjct:   29 VILGGFTNGEWGAS--NLDGLRDIAAVKLDGEAGTEVWRYQAAASTSSSGG-----YGVSYVLGVAVDSTNNPVLVGTTYNSLVDGVGVPGDWDFFAIKLDGVTGGELWRVQGGVAFTREGLLGAKVDSSGDLVAAGYAANEDASELNFLVVKLSGSDGSVLWEYAPSTASGGVFHSVDLDDRSHVYVAG 211
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BLAST of mRNA_D-herbacea_M_contig94.15937.1 vs. uniprot
Match: A0A3M1KKL7_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1KKL7_9DELT)

HSP 1 Score: 91.3 bits (225), Expect = 6.120e-17
Identity = 73/235 (31.06%), Postives = 105/235 (44.68%), Query Frame = 2 
Query:  287 GDFSAVKLDGSTGALLWTWTGTSSDDEADWMISADTDSSNDVVLGGFTKGSWASSFTNPENQRHLAAVKLDGATGEEIWRYQEVAPHSTVAEEDYIYYGSGTVFGVTVNGEDDVFLAGQIYGSLEFGEGDPGDSDYFLIKLDGATGDEIWTV--QGGSNSSFDMSADMDIDFAGDLVAAG-VTGNKTAWDIQAIKFSGDDGSMIWEYSSPS---STRDFLYGVAVDDEGNVYVAG 973
            GDF  VKL   TG+ LW W  + +    D   S   D S DV+  G        +F N       A VKLDGATG E+WR +E+   +   EE            V V+   DV +AG +              D+ ++KLDG TG E+W V   G + +  D + D+ +D  G++ A G +  + +  D   +K +G+ G+ +W         S  D    VAVD  G+V  AG
Sbjct:   99 GDFVVVKLVRVTGSELWRWERSGTAPGLDTAYSVAIDGSGDVLAAG--------TFENSATNADFAVVKLDGATGTELWR-REIDGSANTDEE---------AAAVVVDASGDVVVAGTLSSPAT-------QDDFAVVKLDGTTGAELWRVLLDGSAAAGNDAAYDVALDAGGNVFAVGRLKQSSSDADFAVVKLAGETGAELWRREIDGLADSGSDGALRVAVDPAGDVIAAG 308
[Close]
BLAST of mRNA_D-herbacea_M_contig94.15937.1 vs. uniprot
Match: A0A8I2CYC6_9DELT (SBBP repeat-containing protein n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A8I2CYC6_9DELT)

HSP 1 Score: 77.4 bits (189), Expect = 4.920e-12
Identity = 75/274 (27.37%), Postives = 133/274 (48.54%), Query Frame = 2 
Query:  197 IDSDDNIIILGASDGLSSVGSDDTFESTLSGDFSAVKLDGSTGALLW-TWTGTSSDDEADWMISADTDSSNDVVLGGFTKGSWASSFTNPENQRHLAAVKLDGATGEEIWRYQEVAPHSTVAEEDYIYYGSGTVFGVTVNGEDDVFLAGQIYGSLEFGEGDP-----GDSDYFLIKLDGATGDEIWTVQGGSNSSFDMSADMDIDFAGDLVAAG---------VTGNKTAWDIQAIKFSGDDGSMIWEYSSPSSTRDFLYGVAVDDEGNVYVAG 973
            +D D N+ + G S   ++ G+     S L  D   +KLD S+G LLW T+ G++ DDE  + I+ D D +  + + G++  +W +          +  +KL+ ++G  +W       H + + +D    G G    + V+ + +V++ G    +     G P     G  D  ++KLD +TG  +W    GSN++ D+ + + +D  G++   G         +T +   WDI  +K     G+ +W     S+  D+ YG+AVD++GNVYV G
Sbjct:   56 VDKDGNVYVTGVS--TATWGAPINPHSGLD-DIVVLKLD-SSGTLLWHTFHGSNGDDEG-YGIAVDNDGN--IYVTGYSSATWGAPINPHSGWSDIVVLKLN-SSGALLWH----TFHGSSSNDD----GQG----IAVDKDGNVYVTGVSTAAW----GTPIAPHSGAHDIVVLKLD-STGTRLWNTFYGSNNT-DIGSGIAVDKDGNVYVTGYSYATWGSPITPHSGGWDIAVLKLDSS-GTRLWHTFHGSNEYDYGYGIAVDNDGNVYVTG 302
[Close]
BLAST of mRNA_D-herbacea_M_contig94.15937.1 vs. uniprot
Match: A0A2V6UNX9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6UNX9_9BACT)

HSP 1 Score: 73.9 bits (180), Expect = 5.820e-11
Identity = 72/241 (29.88%), Postives = 108/241 (44.81%), Query Frame = 2 
Query:  287 GDFSAVKLDGSTGALLWTWT----GTSSDDEADWMISADTDSSNDVVLGGFTKGSWASSFTNPENQRHLAAVKLDGATGEEIWRYQEVAPHSTVAEEDYIYYGSGTVFGVTVNGEDDVFLAGQIYGSLEFGEGDPGDSDYFLIKLDGATGDEIW--TVQGGSNSSFDMSADMDIDFAGDLVAAGVT----GNKTAWDIQAIKFSGDDGSMIWEY--SSPSSTRDFLYGVAVDDEGNVYVAG 973
            G+F    LDGS+G  LW  +    G ++         A  D +N V  G           TN     + A VKLDGA+G E+WR Q ++ +++  E             V V+ +  V  AG        G   PG +++ ++K +GA G E+W  TV G +++S D +  + +D  GD+ AAG T    G+ T+ D   +K  G+ G  +W     S   T      V VD   +V VAG
Sbjct:  232 GNFVVATLDGSSGGELWVHSIPCCGIANAXXXXXXALA-IDGANVVAAGR---------ATNKPQTNNFAVVKLDGASGAELWR-QAISLNASAPE---------AANAVAVDEDGGVVAAGVT------GAPGPG-TNFTVVKFNGADGAELWRLTVNGTASNSLDQALAVAVDRRGDVAAAGTTQNTSGSITSSDFTVVKVDGESGEELWRQVIGSAPGTNGGALAVRVDAACSVIVAG 445
[Close]
BLAST of mRNA_D-herbacea_M_contig94.15937.1 vs. uniprot
Match: Q39ST0_GEOMG (Fibronectin type III repeat, DUF2341 repeat and LamG-like domain protein n=2 Tax=Geobacter metallireducens TaxID=28232 RepID=Q39ST0_GEOMG)

HSP 1 Score: 68.6 bits (166), Expect = 5.810e-9
Identity = 75/301 (24.92%), Postives = 124/301 (41.20%), Query Frame = 2 
Query:  125 INFSYEAWRW--QGWTSTDEFCEDGTIDSDDNIIILGASDGLSSVGSDDTFESTLSG-DFSAVKLDGSTGALLWTWTGTSSDDEADWMISADTDSSNDVVLGGFTKGSWASSFTNPENQRHLAAVKLDGATGEEIWRYQEVAPHSTVAEEDYIYYGSGTV------FGVTVNGEDDVFLAGQIYGSLEFGEGDPGDSDYFLIK------LDG-ATGDEIWTVQGGSNSSFDMSADMDIDFAGDLVAAGVTGNKTAWDIQAIKFSGDDGSMIWEYSSPSSTRDFLYG--VAVDDEGNVYVAG 973
            +N+    W +      +++++ E   +  D+N ++ G S             +TL+G D+  VKLD +TGALLW+      D E D   S   D SN  ++ G++   +A +  N  +   +  +K   A G  +W  Q              Y G G +          V+G ++V + G       +G+    + D +L+K      LDG       W+         D  + +  D  G++V  G   N   +DI   K++G  G  IW++    +     YG  +AVD  GNVYV G
Sbjct:  573 VNYLAPTWNYVFNSSDNSEDYAEAIAVGPDNNPVVTGYS------------LATLTGFDYYTVKLDHTTGALLWSERYNDVDSELDIAKSVVVDGSNTAIVTGYSSLYYAPAARNINS---VFTLKYPAAGGIPLWEGQ--------------YNGPGGIDDRARAIATAVDGSNNVAVVG-------YGKNAANNDDIYLLKYAATPPLDGFGKAIPAWSATPYDGGGNDYPSAVAFDKDGNIVITGYRHNGINYDIYTAKYNGATGVKIWDHILDGAGHGDDYGQSLAVDAVGNVYVTG 837
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig94.15937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD80_9PHAE2.380e-9453.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKX8_ECTSI1.010e-9152.31Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D8LJC9_ECTSI3.730e-9151.43Fibronectin type III domain protein n=1 Tax=Ectoca... [more]
D8LJD0_ECTSI9.810e-8453.61Fibronectin type III domain protein n=1 Tax=Ectoca... [more]
A0A6H5JLD3_9PHAE5.120e-6645.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJD2_ECTSI5.650e-3844.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A3M1KKL7_9DELT6.120e-1731.06Uncharacterized protein (Fragment) n=1 Tax=Deltapr... [more]
A0A8I2CYC6_9DELT4.920e-1227.37SBBP repeat-containing protein n=2 Tax=Deltaproteo... [more]
A0A2V6UNX9_9BACT5.820e-1129.88Uncharacterized protein n=1 Tax=Candidatus Rokubac... [more]
Q39ST0_GEOMG5.810e-924.92Fibronectin type III repeat, DUF2341 repeat and La... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig94contigD-herbacea_M_contig94:303956..311461 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score78.2
Seed ortholog evalue7.1e-12
Seed eggNOG ortholog771875.Ferpe_0702
KEGG koko:K02014
KEGG TC1.B.14
Hectar predicted targeting categoryother localisation
EggNOG free text desc.cell adhesion involved in biofilm formation
EggNOG OGsCOG1470@1,COG1470@2,COG1520@1,COG1520@2
COG Functional cat.S
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons2
Model size973
Cds size864
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig94.15937.1prot_D-herbacea_M_contig94.15937.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig94 303956..304819 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935757.2356453-CDS-D-herbacea_M_contig94:303955..3048191622935757.2356453-CDS-D-herbacea_M_contig94:303955..304819Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig94 303956..304819 -
1690880691.3110917-CDS-D-herbacea_M_contig94:303955..3048191690880691.3110917-CDS-D-herbacea_M_contig94:303955..304819Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig94 303956..304819 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935757.2558355-UTR-D-herbacea_M_contig94:304819..3048321622935757.2558355-UTR-D-herbacea_M_contig94:304819..304832Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig94 304820..304832 -
1690880691.3232002-UTR-D-herbacea_M_contig94:304819..3048321690880691.3232002-UTR-D-herbacea_M_contig94:304819..304832Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig94 304820..304832 -
1622935757.274612-UTR-D-herbacea_M_contig94:311365..3114611622935757.274612-UTR-D-herbacea_M_contig94:311365..311461Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig94 311366..311461 -
1690880691.3339915-UTR-D-herbacea_M_contig94:311365..3114611690880691.3339915-UTR-D-herbacea_M_contig94:311365..311461Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig94 311366..311461 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig94.15937.1

>prot_D-herbacea_M_contig94.15937.1 ID=prot_D-herbacea_M_contig94.15937.1|Name=mRNA_D-herbacea_M_contig94.15937.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=288bp
MSDSSINFSYEAWRWQGWTSTDEFCEDGTIDSDDNIIILGASDGLSSVGS
DDTFESTLSGDFSAVKLDGSTGALLWTWTGTSSDDEADWMISADTDSSND
VVLGGFTKGSWASSFTNPENQRHLAAVKLDGATGEEIWRYQEVAPHSTVA
EEDYIYYGSGTVFGVTVNGEDDVFLAGQIYGSLEFGEGDPGDSDYFLIKL
DGATGDEIWTVQGGSNSSFDMSADMDIDFAGDLVAAGVTGNKTAWDIQAI
KFSGDDGSMIWEYSSPSSTRDFLYGVAVDDEGNVYVAG
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mRNA from alignment at D-herbacea_M_contig94:303956..311461-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig94.15937.1 ID=mRNA_D-herbacea_M_contig94.15937.1|Name=mRNA_D-herbacea_M_contig94.15937.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=7506bp|location=Sequence derived from alignment at D-herbacea_M_contig94:303956..311461- (Desmarestia herbacea DmunM male)
CGATGCTTTGACTCTTCATCATCGTAGTAGCTACTATACCATTCGGGCAG
GAGGGGGCACATCGGGCAGCAGGAGCTGAGGCGGAAGACGAAACGGGTAT
GTTGTGTTGTTGCCTTGTTGGAATATTTCGAGAGGGCGTGCGTATGTCCA
ACTTTATGCAAAACCCCCCCAAAAACAGCTGGCATCACATACATCGCGGC
TCCACCGAACGAAGCAGAACACATCCAAGCGTCATGGGTAGAAATAGTAC
AGCTATAGGTAGTGGTGGGCGTGGATGCGCTCGTGGTCGGGCCAGTGCGT
GCGGCAGCGTGAGATTCAGGACGAGTCGTTGTATACAAACCACTGCAATG
ACACTCATAGCTGTACGTTGTCTGTTACACCGCCACAGGGTTATATGTAA
ATGTATTATTGTGGAGGAGACTATTTAGAAGGTATGTAGAAAGATCGTCA
ATCATGCACTTCTGGAAGATCCATCGGCCCATTAGAGGACCCGAGGACAA
TTCCAGCAAGATACTACGTATCTTGGGTGATAGCCCGAAATACGTAGGGT
CCTTGGACAAGCCTGACGGCGCGCCCAGAGACCACTCTCTAATCTTCGCC
TGTAGCGAAGGGCTCTCTCCTTGCCTACATCTACCAAAGAACTCGGACCT
GCCTCCGGTAGCGGGCTAAAGCTACCACCACACTGGGAGGCCTCTACGTA
GAAGGAGCCTCTTCATATTGGCGTCGTCGATAATCGAACTCAACATAGAA
TTTTTTTTTGTATTTGGCTTTGAGAGAGAGAGAGAATACAAAAACATGGA
TGACTTTGGCCCTACGGCCAACCAGAAGCGCAACGCGAGGAGGAGGTTAA
AGAAAAAGCAGAAGCAGCAGACAGCGCAGACCGATACCGTGGCGCCCACA
AACTCGACACCGGCACCTACAATCTCGGCACCGGAGCCCGCGGTGTCGCA
AGAATCGGAGGATTATTTTACGAAATATACCTGGGGTAGCATCTGTCAGG
CAATACGACCCGGTCCGGTGAATATGTGTGCTGCACTGCCTCAGTACAGT
ACATGTAAAGACACTATTAGTACACTATTTGATTCTGTACTGACTACAAC
AGTTGTAGCAGTGTTGTTGTGCATTGTATCTACTATCGTGCATAGTCGTA
TTTCGCCGTTGTACTTGTACGGCGTTGTACTGTTTGTTGTTGTGCGGTGG
TGCTGTGCACGCATACGAAGTAGAGTACAAGTATGTACTATCATATATGA
TAGTCGTATTTTGCCGCTGTACTACTAGTATACTGGTACGGCATTGTACT
GTTGTGCCGTGCTGTGCACGCATATAGACTACTGGTACAAGACAACTACA
GTACTACTACACTACTACTGTACGTGTTAATATTAATAGTACCGCGAACA
AACATCGTCGCTATTAGAGGCCTATGCATGTACAGCAGTCCGTTGTTCCG
TATTGTGTACTCGTACCGAGAAGGAGTGCAAGATGCGACAACTGTTACAG
TCTGTGCAGATGCTTCAAGTCATAAACCGCCACGTCCATCGCTCAATATA
CTGCTGCAGTAGTAGTCCCCCCATCTTATACCATTACCAATCCACTTTAT
TACTTCCAACTCCGCACTGTCAAATCCGTGTTGTGGTTGTCTTCGGGGGT
GCCTTGGGGAACGCGGAGTCAGCTGCGTGCTCCCTATATTGTATTTCGTA
CTAAAAACTAAAAAAGCCAAAAACGGATGGAAATTTCTAGGGCTGTGTAT
GGATGCCGATATACAACGATGTATCGTCCGATACGATATAGCGTATATCT
ATCGGTTGACAGCTTTACCCATGTATCGGCCTTTGTTTCCACTGGGCTAT
AACGTCAGTTCCTGCCCTGCCGTCAGGATGTACAGGGGTCGCTGTTAAAC
AACACCAAGGCAATCTGCAGCCAACTACAAGGGTAATAATAATATAGCGA
TTATTGCGGGGTAGCTTCTCTCGCAGCTTGTATATTACTGCGGTACGTAC
AGTATACCCCTACGAGTACCCTACGAGCAGTGAAGGAGTGTATGCTTTGT
ATGCGTAACTATTGTCTAGGGGAAGGTTGGGTTCTTGCGTTTGCTTGTAC
AGGGCCGTGTGTGGCGTAGCATGAGACGGGTTTGTTCGTTTTATATCCTT
TTACAACGGTGCTCTGGAGGTACTTCTTCTCTCTACAGTAGCAGTAGCCT
ATCGTGTCGCTGTTCTGTAGCTATTGGTTATGCTCGGTGCATGTGAAACG
GTTGGAGTAGATTTGGGAGTGTATTGATTGATTGATTGATTCACACATTA
ATAATAGTTCATCGTCCAAGATCTAGCCCGTGGTCACACAAGTGCTGATC
CCTATGTAGAAAGATCCAGAAAACACAGAAAAAGGCAAAAAAAGATTACA
CAGGACCGAATAGGTACACCAACTCATACTGGGCGATGTGTAAACGGACC
TACTAACACTATCGCAGGTATCCATTCGACTACGACACCAACCGTGTTCT
CCCCCCTTTCCCACCACTAACGAACTCGTGGTTGCTAGCTACAGCAGTTA
GTTGCTGTCTAGAGTGTTGCCTGCACCGTATACGAGCACGGTAGTCTGGG
AATAAAAACAAGACAAAGAGGGTAACACAGTTTTACTGCCATCTGGAGTG
CTGTCAAAATGACGACCCGCGGGCAATGCAGTGAAAAAAGAACCAGCAAC
CAAAGCCAACAAAACTATGCGAATTCACACTTACTACGCACACTAGATAC
GAACGAACGGCGTTATCGGTATCACCAATAATACACCAATTTTATTTACG
AGTCATGAAACATAAGCAAAATCTCACATCCAAAAACACAACATTGTCAG
TGATGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTCTTCACATGAAAAGTCGTCCATTCCACTCTACGACATCCACTAGCG
TACTCAGAGTCTGTACTGGATCTTCCACCCTAGAAATACACGAAATTCCG
TGGTCACAGGCTAACATATCAAACAAATCGCAAAAAAACAAAAAAAAAAA
AAAAAAAAAAAAGAAAGAAAGAAAGAAAGCAAAAATTAAAAAAGATGGGA
AGAAACAATAAAGAAGAAGCGAGCAAAACATGCCACAGGACAAAACGGGG
GCAGAACGAAGACAGACAAAACAAAACGCAGAACGAAGATCAGAAAGTCA
ACGATACTTGGGGCTACGGGAGGGAGGTACGGGGACTGTTTGTCACACTG
AAACATTTCTACCCGGTTTGCCATCTCCTCCTTACTCTCATCGGCGGCAG
TAATAAATTTGCTGCTACTCCTGCCCCTCCCGGTCCCCATCTTGCTACTT
CGGACTTCCCCGGCCCTCTTCGCATGACGTGCACTACTCTTCGCCGCCTC
CTCTTTGTGCCACGTCTCCATGAAGGTTTCTGCTCCTTCCATGACCCCCC
TGTACCACCTTCCCCACTCGACCGCCGCTCTTTCCCACGTGATGTGCACA
CATATTATTACAAATTATGGTGAACATCAACACCATAGTAGATAGGTCTC
ACCAGGTTAGGAGGTATTATTCCATCACAACAAATAATTTAACATAATAA
GCAAACAACGCGCCAAGTATTTCGTACTCAAATTAAAAATTATGGTAAAC
AGTAACAGCAACATAATAGAAGACTACTCTACTACAACAAACAACTTAAA
TATAGGTAGAGAAGCAACGAAAAGTACCAGTCAATGATTTAACATTATTA
GTTTTATGCACAGAAGCAAAATCACAACCAAAACCTAAAACCCAACTGTG
TCAGGTATGCGTACACACGTTACAAATTATGGTAGACATTGTTATTATTT
TTCATTAACAAAGACAACAGCCACCAAATAGAAGCAAAACCAAAACCAAA
ACTCAAACCCCACAGTATGAAATATGCTTACTCAAATTACAAATTATGAT
AAAACATCAACAACATAGCTAGGAGGACGATATTAGTCTATCACATCATC
AGACCATTAAACGTAAGAAACAAGCAACGAAAAACCAATTACTGGCAAGT
TGGTCGGGGCAGCAAGGGGGCAATCGTCAATTTCACAGTGTAACTTTTCT
ATTAATAACATGCAAGAGACAACGCAAACAACTTATCAACTATTATTGCA
AGCATGGGGCAATAATTATTTTTCTTACAAAGACATCAGCTGTGACGTTC
CAAACTGGTTCGGGGCCAGGGGATAATAATCGTCAACCTCACTGTGTGAT
ACATGGTCCCGCGGATTCTATCGGTCCTCAGACAAGTTATAACGCAGTGG
CTGCCCTGGGGGATCCCAGGCTCTACAGAATAATTTTGGGAAACAGGCCC
CATCATCGTGTGCACTGGATCATAATCTATAGGAGGGGGACGGGAAGTAA
CTGTGCATGTGTGACATTTTCACATCATGTGTACGTACCTGAACCTATAC
TATGCAAATTCACACTTACTACGCACACTCTACTAGATACGAAGGCAACG
GCGTTATCGGTATCACCAATACACCAATTTTATTCATAATAATATCGTTT
TTTTTTTTTATTTCCAACTGCAATTGGATGAAAGTCGACGAGGGAAGAAA
GTGCTGCACTCTTCTCGCGACAAAAATGTAGGCACGTACCGTAGTGGGAA
GGCAGGAAGAGCACCTGCTATGTGACCCCGGATCTGAGTAACGAAGAGAG
ATGGAGCTAGAGATAGAATCGGGCGAAGAAAATAAATGGGACGGAAAAAA
AAAAAAAAAAAAACTGCATTTTTTTTTTTATCCAGTAGTAGTGTTTCTGT
GTAGACTCCTTGCACCTCTTTGTGACCACGGAACTCGAATCTCTCTAGTA
GGAAGAAGGGGAATCAGTACGTACAACGAAACAGTATGAACGTGCTGGGT
GTCCATCAGTTTGTGTAGAAAGAACGGCTTTTAATGTGAAGGCAACAACA
ACAACAACAACAACAACAACATGTATGTATTAATACCTATTATGATGGTA
GCCACGAACACAACAACAGCCAACCGTAGCATGCTACTCCACCACAACCG
ACAACTAAACATAGGCAAACAGCAAACAGGCAATTAAACTTGAACACGCA
AGAATACCGATCAAATACCACGATAATAATTAATAGTAAAATGAATGACA
CTCCACCGCAACAAACAACTAAATATGGGCAAACAAGCAATTATTAATCT
TGAGCACGCAAGAACTCCACCCCGAAACATGGAAAACACAGATATCAACC
CGAAGAATCTACCTTATTTTATGTAATAAATTTAAGCACGTCACGAGCTG
AGGTATGAAGTATCCTATCGCGAAAGATAGAATTCGAAAACTCGAGTTCG
AAAATCTAAAAATAATAGCGTGTTTGCGAAAAAAAAAAATCGATCATTTA
TTCGCTCGTACAAAAATGGCCAAATTCCTTCGACATAAATTTTCTCGTGT
TTGCGAAATAAGATACCATGCGAAAAGTTCCATCGACGCTGCATACCAGC
ACCAGCCAGATGGCAGACACCAGAACCAGGGGGGATCGATTTTTCTTTTT
TCGCGAACACCCCATGCTCGAGCAACAGACGTGTATGTATATGCTAACAA
AATTTTGGGATCTGCCTCTCTCTCGCGGAGGACAACGCTGCGGTCTGCCT
CTCGCTCGCGGATGATATTTTTATGATCTCCGCCGTGTTTTTTCTTTTTG
ATTTTTTTGAGGTTGTCCATTATCGTCTCCTTCGGAAGTGAAAATTAAGT
AATTCAAACAATTATTATAAATATATGCTTTTCGGCTAATGAGTAAAATT
CCGCGTTGGTCGAGTTTTAAAGATGTCTCGCAGTACAGACATACATTTCA
TTTTGCTTTACGATTAACGACAACACCCACTCCATGACTCCGTTCCCCTC
ACTGTCTCGGCAAGGCCTGCTATTCGGCATGGCTTCTATAATAATTGCAT
TGTCTCACACAATCGGACAATTCGATGCTACAAAAGGTCGCTGCCTGTCA
AAAAAGGGGCCTAACTGAAGAAAAAAGGATAATAAGTAATTAATGAACGA
AAATTGGTATGCCGTAAGCTGTTAACGGCAAAGAGGATGATCCACTCCCT
TTGTAGGCAAAAATGTGTCTGTGCTCGTTTGTGTACGCGGCGCGCTTTTC
CGCGCTCTAGTTAACCCCATGTTTGTGCTCAAAATCAAACAAAAAGGTTG
CGCGTGCTCCATGTGGTTTATGCGCGTGTGCCCGAGGCGTTATGTTATTA
CGTCGTGGGGTTGAATAGCGCCCGCAGTAGCACTTGCCCCGGAGCGAAAA
TCGACAACCCCTTTTTGTTCCTAAAGGGGGGGGGGGGGTACGCCCCTTTT
TTGCGTCTATGGACCTTCATATATTCAACAGGGCTAAACATAAATCGACC
CAGTATGGTTAAAAAAAAGTCGAAGCCCAAAACCTGAGTGTCTCGATCTA
TTCAAAGAAACGTGATTTCATACATTGATTGTCGTTGTCGATGATTTTGT
TTGACCCTTACAGCTTGGAGTATCGCCAAGAGGCGACTTAATTCACTGGG
TGGCGCAATAGCTTGCTTGAATGCAGTCAGCTCAGCGTCTCACTTTGTCT
CTGTATGCATACTTACAACAATAATACAGGTTTCAAGTGGCGATGTCCGA
CAGTTCGATAAATTTTAGTTATGAAGCATGGCGTTGGCAGGGATGGACGA
GTACCGACGAATTTTGTGAAGATGGTACTATCGACAGCGACGACAATATC
ATTATCTTGGGAGCCAGCGACGGATTGTCCAGTGTCGGCTCGGACGACAC
TTTTGAAAGCACCCTTTCCGGCGACTTCTCGGCCGTGAAGTTGGATGGCT
CCACGGGAGCCTTGCTTTGGACGTGGACCGGTACTTCGTCAGACGACGAA
GCGGATTGGATGATTTCAGCGGATACAGACAGCTCCAACGATGTCGTACT
AGGCGGTTTCACCAAGGGCTCCTGGGCAAGCAGCTTCACAAATCCAGAAA
ACCAGCGACACTTAGCGGCGGTGAAGCTCGACGGGGCAACAGGAGAAGAA
ATCTGGAGGTATCAAGAGGTTGCTCCGCATTCCACCGTAGCCGAGGAGGA
TTACATCTACTATGGGTCAGGTACGGTGTTTGGGGTCACGGTGAATGGCG
AGGACGATGTTTTTCTTGCAGGCCAAATCTATGGAAGCTTAGAGTTTGGC
GAGGGAGACCCAGGTGACTCAGATTACTTTCTCATCAAGCTCGATGGCGC
CACTGGAGACGAGATCTGGACTGTGCAAGGCGGCTCGAATTCCAGCTTCG
ACATGTCAGCGGACATGGATATCGATTTCGCTGGGGATTTGGTAGCCGCT
GGCGTTACTGGCAATAAAACCGCGTGGGATATCCAGGCAATTAAATTTAG
CGGGGACGATGGGAGCATGATCTGGGAGTATTCCTCTCCTTCATCGACTC
GTGACTTTCTTTACGGTGTTGCTGTCGACGACGAGGGCAACGTGTACGTA
GCTGGC
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Coding sequence (CDS) from alignment at D-herbacea_M_contig94:303956..311461-

>mRNA_D-herbacea_M_contig94.15937.1 ID=mRNA_D-herbacea_M_contig94.15937.1|Name=mRNA_D-herbacea_M_contig94.15937.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1728bp|location=Sequence derived from alignment at D-herbacea_M_contig94:303956..311461- (Desmarestia herbacea DmunM male)
ATGTCCGACAGTTCGATAAATTTTAGTTATGAAGCATGGCGTTGGCAGGG
ATGGACGAGTACCGACGAATTTTGTGAAGATGGTACTATCGACAGCGACG
ACAATATCATTATCTTGGGAGCCAGCGACGGATTGTCCAGTGTCGGCTCG
GACGACACTTTTGAAAGCACCCTTTCCGGCGACTTCTCGGCCGTGAAGTT
GGATGGCTCCACGGGAGCCTTGCTTTGGACGTGGACCGGTACTTCGTCAG
ACGACGAAGCGGATTGGATGATTTCAGCGGATACAGACAGCTCCAACGAT
GTCGTACTAGGCGGTTTCACCAAGGGCTCCTGGGCAAGCAGCTTCACAAA
TCCAGAAAACCAGCGACACTTAGCGGCGGTGAAGCTCGACGGGGCAACAG
GAGAAGAAATCTGGAGGTATCAAGAGGTTGCTCCGCATTCCACCGTAGCC
GAGGAGGATTACATCTACTATGGGTCAGGTACGGTGTTTGGGGTCACGGT
GAATGGCGAGGACGATGTTTTTCTTGCAGGCCAAATCTATGGAAGCTTAG
AGTTTGGCGAGGGAGACCCAGGTGACTCAGATTACTTTCTCATCAAGCTC
GATGGCGCCACTGGAGACGAGATCTGGACTGTGCAAGGCGGCTCGAATTC
CAGCTTCGACATGTCAGCGGACATGGATATCGATTTCGCTGGGGATTTGG
TAGCCGCTGGCGTTACTGGCAATAAAACCGCGTGGGATATCCAGGCAATT
AAATTTAGCGGGGACGATGGGAGCATGATCTGGGAGTATTCCTCTCCTTC
ATCGACTCGTGACTTTCTTTACGGTGTTGCTGTCGACGACGAGGGCAACG
TGTACGTAGCTGGCATGTCCGACAGTTCGATAAATTTTAGTTATGAAGCA
TGGCGTTGGCAGGGATGGACGAGTACCGACGAATTTTGTGAAGATGGTAC
TATCGACAGCGACGACAATATCATTATCTTGGGAGCCAGCGACGGATTGT
CCAGTGTCGGCTCGGACGACACTTTTGAAAGCACCCTTTCCGGCGACTTC
TCGGCCGTGAAGTTGGATGGCTCCACGGGAGCCTTGCTTTGGACGTGGAC
CGGTACTTCGTCAGACGACGAAGCGGATTGGATGATTTCAGCGGATACAG
ACAGCTCCAACGATGTCGTACTAGGCGGTTTCACCAAGGGCTCCTGGGCA
AGCAGCTTCACAAATCCAGAAAACCAGCGACACTTAGCGGCGGTGAAGCT
CGACGGGGCAACAGGAGAAGAAATCTGGAGGTATCAAGAGGTTGCTCCGC
ATTCCACCGTAGCCGAGGAGGATTACATCTACTATGGGTCAGGTACGGTG
TTTGGGGTCACGGTGAATGGCGAGGACGATGTTTTTCTTGCAGGCCAAAT
CTATGGAAGCTTAGAGTTTGGCGAGGGAGACCCAGGTGACTCAGATTACT
TTCTCATCAAGCTCGATGGCGCCACTGGAGACGAGATCTGGACTGTGCAA
GGCGGCTCGAATTCCAGCTTCGACATGTCAGCGGACATGGATATCGATTT
CGCTGGGGATTTGGTAGCCGCTGGCGTTACTGGCAATAAAACCGCGTGGG
ATATCCAGGCAATTAAATTTAGCGGGGACGATGGGAGCATGATCTGGGAG
TATTCCTCTCCTTCATCGACTCGTGACTTTCTTTACGGTGTTGCTGTCGA
CGACGAGGGCAACGTGTACGTAGCTGGC
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