mRNA_D-herbacea_M_contig938.15931.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig938.15931.1
Unique NamemRNA_D-herbacea_M_contig938.15931.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig938.15931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig938contigD-herbacea_M_contig938:35647..35964 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size318
Cds size318
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935755.2317972-CDS-D-herbacea_M_contig938:35646..359641622935755.2317972-CDS-D-herbacea_M_contig938:35646..35964Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig938 35647..35964 +
1690880690.2464304-CDS-D-herbacea_M_contig938:35646..359641690880690.2464304-CDS-D-herbacea_M_contig938:35646..35964Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig938 35647..35964 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig938.15931.1prot_D-herbacea_M_contig938.15931.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig938 35647..35964 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig938.15931.1

>prot_D-herbacea_M_contig938.15931.1 ID=prot_D-herbacea_M_contig938.15931.1|Name=mRNA_D-herbacea_M_contig938.15931.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=106bp
DDPLAAATTTNLAEGGSGRTSDPAGMTTVDVPMPDIYLHELSLTFALIGW
PCSCKPINALFVMGFSFPAPVLPGFSKANPTVSESNGSDGDFEVDYIFCI
TLADG*
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mRNA from alignment at D-herbacea_M_contig938:35647..35964+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig938.15931.1 ID=mRNA_D-herbacea_M_contig938.15931.1|Name=mRNA_D-herbacea_M_contig938.15931.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=318bp|location=Sequence derived from alignment at D-herbacea_M_contig938:35647..35964+ (Desmarestia herbacea DmunM male)
GACGATCCGTTAGCGGCGGCCACGACGACGAATCTGGCGGAAGGGGGGTC
AGGGCGTACCTCTGACCCGGCCGGCATGACAACCGTGGACGTCCCCATGC
CGGACATATATCTCCATGAATTATCGCTGACCTTCGCCCTCATCGGTTGG
CCCTGTTCTTGTAAGCCAATCAACGCGCTGTTTGTTATGGGTTTTTCTTT
TCCGGCGCCAGTTCTGCCGGGCTTTTCGAAAGCCAACCCTACTGTATCGG
AGAGCAATGGAAGTGACGGTGATTTTGAAGTGGACTACATTTTTTGTATT
ACTCTGGCGGATGGGTAA
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Coding sequence (CDS) from alignment at D-herbacea_M_contig938:35647..35964+

>mRNA_D-herbacea_M_contig938.15931.1 ID=mRNA_D-herbacea_M_contig938.15931.1|Name=mRNA_D-herbacea_M_contig938.15931.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=636bp|location=Sequence derived from alignment at D-herbacea_M_contig938:35647..35964+ (Desmarestia herbacea DmunM male)
GACGATCCGTTAGCGGCGGCCACGACGACGAATCTGGCGGAAGGGGGGTC
AGGGCGTACCTCTGACCCGGCCGGCATGACAACCGTGGACGTCCCCATGC
CGGACATATATCTCCATGAATTATCGCTGACCTTCGCCCTCATCGGTTGG
CCCTGTTCTTGTAAGCCAATCAACGCGCTGTTTGTTATGGGTTTTTCTTT
TCCGGCGCCAGTTCTGCCGGGCTTTTCGAAAGCCAACCCTACTGTATCGG
AGAGCAATGGAAGTGACGGTGATTTTGAAGTGGACTACATTTTTTGTATT
ACTCTGGCGGATGGGTAAGACGATCCGTTAGCGGCGGCCACGACGACGAA
TCTGGCGGAAGGGGGGTCAGGGCGTACCTCTGACCCGGCCGGCATGACAA
CCGTGGACGTCCCCATGCCGGACATATATCTCCATGAATTATCGCTGACC
TTCGCCCTCATCGGTTGGCCCTGTTCTTGTAAGCCAATCAACGCGCTGTT
TGTTATGGGTTTTTCTTTTCCGGCGCCAGTTCTGCCGGGCTTTTCGAAAG
CCAACCCTACTGTATCGGAGAGCAATGGAAGTGACGGTGATTTTGAAGTG
GACTACATTTTTTGTATTACTCTGGCGGATGGGTAA
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