mRNA_D-herbacea_M_contig93.15921.1 (mRNA) Desmarestia herbacea DmunM male
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Overview
Homology
BLAST of mRNA_D-herbacea_M_contig93.15921.1 vs. uniprot
Match: D8LMC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMC2_ECTSI) HSP 1 Score: 422 bits (1085), Expect = 3.710e-135 Identity = 264/550 (48.00%), Postives = 349/550 (63.45%), Query Frame = 3
Query: 315 MRSSGTLFFLLWCGLFSVAV--VRGQE---------EEAGEDAQEADAVLQLGEGNNSNDTAVAGVIFRDN--LYVVSTTEGSLEE-TSAGGVDFTINVYDEELDPGVAAQYGGDGDDYVTAIAGDFSVGVDLVVVGGTRSEEEHLFGLETPTGEEDWFIATIDQATLETVLTYVNGTLENDQRATAV---VIAEDGYVVAGFTWGEYFEENAGADNDEDSVGYDAWVLKIDFDLNPDFLWSIQFGTIAY-DVPSALVLDDDGDVYVVGTTTDSSNIVSADDEDVIQSMFVYKLDGDDGVIIWTATDELGVLSDMSQAHGAVLSEDGDELYVSGNTQGVIPGYDGDSTDTDELFLLGLSEDDGTVNWVYQSENNAAAFGTGGVVLADDGSPIIAGIAFGNQFNLT---FTYWEGGSGDMIAAKIDI---EELEVVKYYNAAAASNLTREDALAMVKDPDVTDGVFLIGEENGDFEDEDVEPDD-LSILILKVQLETIPEVEEVD--DGEFDYPYFQT-LGIFAGGGLVFYIAYKWAAYSKAASASKGVQV 1880
MR + L ++W LF + VR Q+ EEAG+DAQE A Q G N +D AVAGV D L+V + T L T+AGG DF I Y+ +L+ + QYGGDGDD +TA+A D SV +V+VG T S+EEHLFGL+T E+D+FIA + LE +VNG+ N++ T V + + Y AG+ A AD G D + LKI+ D++ D LW F T A D+P+A+V+ D VYVVG + D + D+ + + S+FVY LD DDG +W T ELG L+D SQAHGAVLS ELY++G+T G+IPGYDGD+T+TDELF++ + + V+WV+QSE NA AFGT G+VLADDGSPI+ GIAFG+QFNL+ FTYWE GSGD +AAKIDI E++EV KY+ AAAASN TRE ++VKD DV DGVFLIG+++G F+ ED E D L+ L+LKV+LE +PE E+ DG D+PY+ + +FAGG +F +AYKWAA S+AA A + V
Sbjct: 1 MRVAPWLAAVVWSSLFLARLEEVRAQDSEDSSSDSQEEAGDDAQEVTAFAQGGTTNLVDDFAVAGVWIVDTSQLFVAANTGNELSGGTNAGGTDFAIIKYNSDLELQDSVQYGGDGDDTITAMAVDESVQSGIVIVGSTASDEEHLFGLDTAPREQDYFIAELSSGDLEVTKQFVNGSQFNNEELTVVGLEPVLDGAYFAAGWA--------ASAD------GQDWFALKINHDMD-DILWEEPFETTAVSDLPTAMVVSSDA-VYVVGYSADFEEDLDDDEVEEVSSLFVYALDVDDGSTLWELTTELGTLADGSQAHGAVLSASETELYIAGHTSGIIPGYDGDTTETDELFVVAIDIAEEAVSWVWQSEANATAFGTAGIVLADDGSPIVGGIAFGDQFNLSSASFTYWEFGSGDFVAAKIDIDDPEDIEVSKYFVAAAASNETREQPFSIVKDTDVADGVFLIGQQDGIFDGEDSEGGDPLNYLVLKVELEVLPEKEDXXXXDGR-DFPYWYIGVPLFAGGIALFVVAYKWAAASQAAKAKRATMV 533
BLAST of mRNA_D-herbacea_M_contig93.15921.1 vs. uniprot
Match: A0A6H5L735_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L735_9PHAE) HSP 1 Score: 412 bits (1058), Expect = 2.970e-131 Identity = 252/540 (46.67%), Postives = 343/540 (63.52%), Query Frame = 3
Query: 315 MRSSGTLFFLLWCGLFSVAV--VRGQE---EEAGEDAQEADAVLQLGEGNNSNDTAVAGVIFRDN--LYVVSTTEGSLEETS-AGGVDFTINVYDEELDPGVAAQYGGDGDDYVTAIAGD-FSVGVDLVVVGGTRSEEEHLFGLETPTGEEDWFIATIDQATLETVLTYVNGTLENDQRATAVVIAEDGYVVAGFTWGEYFEENAGADNDEDSVGYDAWVLKIDFDLNPDFLWSIQFGTIAY-DVPSALVLDDDGDVYVVGTTTDSSNIVSADDEDVIQSMFVYKLDGDDGVIIWTATDELGVLSDMSQAHGAVLSEDGDELYVSGNTQGVIPGYDGDSTDTDELFLLGLSEDDGTVNWVYQSENNAAAFGTGGVVLADDGSPIIAGIAFGNQFNLT---FTYWEGGSGDMIAAKIDIEE---LEVVKYYNAAAASNLTREDALAMVKDPDVTDGVFLIGEENGDFEDEDVEPDD-LSILILKVQLETIPEVEEVDDGEFDYPYFQT-LGIFAGGGLVFYIAYKWAAYSKAASASKGVQV 1880
MR + L +W LF + VR Q+ EEAG+DAQ A Q G N ++D AV+G F D L V T L S AGG DF + +D +L+ +AQ+GGDGDD +T++A D + +++VG T S++EHLFGL+T E+D+FIA + LE +VNG+ N++ T V + G YF A D G D + LKI+ D++ D LW+ F T A D+P+A+V+ ++ VYVVG + D + D+ + + S+FVY LD DDG +W T +LG L+D SQAHGAVLS G ELY++G+T G+IP YDGDSTDTDELF++ + D V+WV+QSE NA AFGT G+VLADDGSPI+ GIAFG+QFNLT FTYWE GSGD +AAK+DIE+ +EV KY+ AAAASN TRE +++KD D DGVFLIG+++G F++ D E D L+ L+LKV+LE +PE EE ++ D+PY+ + +FAGG +F +AYKWAA S+AA A + V
Sbjct: 1 MRVAPWLAAAVWSSLFLARLEEVRAQDDSVEEAGDDAQVVSAFAQGGTSNVADDYAVSGFWFEDTAQLVVAVNTGNELSGGSNAGGTDFVVIRFDSDLEVVDSAQFGGDGDDTITSMAVDEVNQSGSIIIVGSTASDDEHLFGLDTAPREQDYFIAALSSDDLEVTKQFVNGSQYNNEELTVVGVEP-------VDEGSYFAAGWAASED----GQDWFALKINHDMD-DILWNKSFETTAVSDLPTAMVVGEEA-VYVVGYSADFEGDLDDDEVEEVSSLFVYALDMDDGSTLWELTTQLGSLADGSQAHGAVLS--GSELYIAGHTSGIIPDYDGDSTDTDELFVVAIDIDSEEVSWVWQSEANATAFGTAGIVLADDGSPIVGGIAFGDQFNLTSASFTYWEFGSGDFVAAKLDIEDPDDIEVSKYFVAAAASNETREQPFSIIKDTDTVDGVFLIGQQDGVFDEGDSEGGDPLNYLVLKVELEVLPEAEEEEEEGRDFPYWYIEVPLFAGGIALFAVAYKWAAASQAAKAKRATMV 525
BLAST of mRNA_D-herbacea_M_contig93.15921.1 vs. uniprot
Match: UPI001CCD014B (hypothetical protein n=1 Tax=Nannocystis pusilla TaxID=889268 RepID=UPI001CCD014B) HSP 1 Score: 63.2 bits (152), Expect = 1.400e-6 Identity = 76/302 (25.17%), Postives = 123/302 (40.73%), Query Frame = 3
Query: 444 GNNSNDTAVAGVIFRDNLYVVSTTE--------GSLEETSAGGVDFTINVYDEELDPGVAAQYGGDGDDYV--TAIAGDFSVGVDLVVVGGTRSEEEHLFGLETP-----TGEEDWFIATIDQATLETVLTYVNGTLENDQRATAVVIAEDGYVVAGFTWGEYFEENAGADNDEDSVGYDAWVLKIDFDLNPDFLWSIQFGTIAYDVPSALVLDDDGDVYVVGTTTD---------SSNIVSADDEDVIQSMFVYKLDGDDGVIIWTA---TDELGVLSDMSQAHGAVLSEDGDELYVSGNT 1268
G+ V + DN+ + TT G+ + + G D + Y P GG+G D+ T +A + ++ VVG T S + GL TP G D FIA + + T ++Y + + V A + V G T AG + D +V K FD N LW +G A D+ A+ LD+DGDVY+ G+T +++ + ++ Q FV + DG +G +W+ ++ G S++S L D + +SG+T
Sbjct: 92 GSGDESFRVVAIDSNDNVIALGTTNSSSGIATVGAWKTSLTGSRDAMLAKYTPLGAPSWVTYLGGNGSDFGSGTCVASNGTI----YVVGDTTSTD---LGLGTPHDTTFNGVRDAFIAKVSSSGTPTWISYYGHSSGSTAARDCAVDASNNVYVVGDTTATSGIATAGTHDTGHDGDDDVFVAK--FDSNGGRLWGTYYGGSATDLGIAIDLDEDGDVYIAGSTKSPNDGHLRQIATDGMHSEALAGAQDAFVARFDGSNGARVWSTYFGSENSG--SEISSDAFTDLEVDTSGIVLSGST 382
BLAST of mRNA_D-herbacea_M_contig93.15921.1 vs. uniprot
Match: UPI00187F98A9 (S8 family serine peptidase n=1 Tax=Microcoleus sp. LEGE 07076 TaxID=915322 RepID=UPI00187F98A9) HSP 1 Score: 58.5 bits (140), Expect = 6.610e-5 Identity = 80/292 (27.40%), Postives = 122/292 (41.78%), Query Frame = 3
Query: 621 DDYVTAIAGDFSVGVDLVVVGGTRSEEEHLFGLETPTGEEDWFIATIDQATLETVLTYVNGTLENDQRA---TAVVIAEDGYVV--------AGFTWGEYFEENAGADNDEDSVGYDAWVLKIDFDLNPDFLWSIQFGTIAYDVPSALVLDDDGDVYVVGTTTDSSNIVSADDEDVIQSMFVYKLDGDDGVIIWTATDELGVLSDMSQAHGAVLSEDGDELYVSGNTQGVIPGYDGDSTDTDELFLLGLSEDDGTVNWVYQSENNAAAFGTGGVVLADD-GSPIIAGIAFGN 1460
DD + AG SV +D+ + + SE + L L E + + D+ T++ N T+E +++ TA + +G V G T G N G YDAWV K +D +W Q GT AYD S + +D++ +VY +G+T S D M Y G DG ++W +L + D A G + +G +++ G T G PG +TD + + +G WV Q AA+ V +D G+ IAG GN
Sbjct: 1369 DDKIVIPAGASSVTIDVFPIDDSESESKELVRLLIK--ESSQYSISKDEGAEVTIIDNDNPTVEWKRQSGISTASYDSSNGIAVDRTNNIYTVGRTSGNLEGTNQGL--------YDAWVSK--YDSAGQQIWKRQIGTTAYDAASGVAVDNNSNVYAIGSTDGGLGNTS----DRTSWMTKY---GTDGNLLWKR--DL-LTPDYYVAQGGISISNG-SIHIVGRTIGNAPGSGEITTDA----FVAKYDSNGNQIWVKQL--GTAAWDEAKSVASDSAGNIYIAGSTKGN 1631
BLAST of mRNA_D-herbacea_M_contig93.15921.1 vs. uniprot
Match: F2UFI9_SALR5 (AAA_23 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UFI9_SALR5) HSP 1 Score: 58.2 bits (139), Expect = 7.310e-5 Identity = 71/242 (29.34%), Postives = 109/242 (45.04%), Query Frame = 3
Query: 834 VVIAEDGYVV-AGFTWGEYF-EENAGADNDEDSVGYDAWVLKIDFDLNPDFLWSIQFGTIAYDVP-SALVLDDDGDVYVVGTTTDS-SNIVSADDEDVIQSMFVYKLDGDDGVIIWTATDELGVLSDMSQAHGAVLSEDGDELYVSGNTQGVIPGYDGDSTDTDELFLLGLSEDDG-------TVNWVYQSENNAAAFGTGGVVLAD-DGSPIIAGIAFGNQFNLTFTYWEGGSGDMIAAKI 1523
V + DG VV G+T + + +AG+ DA+ K+ + +W +QFGT +D V GDVYV G+T + + SA D MFV KLDG DG ++WT S A+G +S D + ++++G+T G + ++ T ++F+L L + TV+W Q AA T +AD DGS I+ G +G T G DM ++
Sbjct: 594 VAVGSDGSVVFVGYTDASFIGQASAGS--------MDAFAAKMTSE--GALVWVVQFGTSDFDYGRDVYVHPATGDVYVAGSTYGAFAGQASAGGSD----MFVAKLDGADGTVLWTWQHGS---SGTDVAYGVSMSGDHEAIFLTGHTFGSLETGVANAG-TSDVFVLRLEDPANNSSASARTVSWARQF--GTAAADTAYEAIADGDGSVIVTGSTYGALLGNT----HAGLADMFVLRL 811 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig93.15921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_M_contig93.15921.1 >prot_D-herbacea_M_contig93.15921.1 ID=prot_D-herbacea_M_contig93.15921.1|Name=mRNA_D-herbacea_M_contig93.15921.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=523bp MRSSGTLFFLLWCGLFSVAVVRGQEEEAGEDAQEADAVLQLGEGNNSNDTback to top mRNA from alignment at D-herbacea_M_contig93:1039040..1058158- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_M_contig93.15921.1 ID=mRNA_D-herbacea_M_contig93.15921.1|Name=mRNA_D-herbacea_M_contig93.15921.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=19119bp|location=Sequence derived from alignment at D-herbacea_M_contig93:1039040..1058158- (Desmarestia herbacea DmunM male)back to top Coding sequence (CDS) from alignment at D-herbacea_M_contig93:1039040..1058158- >mRNA_D-herbacea_M_contig93.15921.1 ID=mRNA_D-herbacea_M_contig93.15921.1|Name=mRNA_D-herbacea_M_contig93.15921.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=3138bp|location=Sequence derived from alignment at D-herbacea_M_contig93:1039040..1058158- (Desmarestia herbacea DmunM male)back to top |