mRNA_D-herbacea_M_contig93.15920.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig93.15920.1
Unique NamemRNA_D-herbacea_M_contig93.15920.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig93.15920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig93contigD-herbacea_M_contig93:989096..991500 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-05_002390.1
Exons3
Model size1117
Cds size729
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig93.15920.1prot_D-herbacea_M_contig93.15920.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig93 989096..991113 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935743.8158493-CDS-D-herbacea_M_contig93:989095..9893891622935743.8158493-CDS-D-herbacea_M_contig93:989095..989389Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 989096..989389 +
1690880684.5750957-CDS-D-herbacea_M_contig93:989095..9893891690880684.5750957-CDS-D-herbacea_M_contig93:989095..989389Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 989096..989389 +
1622935743.835296-CDS-D-herbacea_M_contig93:989953..9901661622935743.835296-CDS-D-herbacea_M_contig93:989953..990166Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 989954..990166 +
1690880684.587611-CDS-D-herbacea_M_contig93:989953..9901661690880684.587611-CDS-D-herbacea_M_contig93:989953..990166Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 989954..990166 +
1622935743.8584428-CDS-D-herbacea_M_contig93:990891..9911131622935743.8584428-CDS-D-herbacea_M_contig93:990891..991113Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 990892..991113 +
1690880684.5993483-CDS-D-herbacea_M_contig93:990891..9911131690880684.5993483-CDS-D-herbacea_M_contig93:990891..991113Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 990892..991113 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935743.8794494-UTR-D-herbacea_M_contig93:991113..9915001622935743.8794494-UTR-D-herbacea_M_contig93:991113..991500Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig93 991114..991500 +
1690880684.607602-UTR-D-herbacea_M_contig93:991113..9915001690880684.607602-UTR-D-herbacea_M_contig93:991113..991500Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig93 991114..991500 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig93.15920.1

>prot_D-herbacea_M_contig93.15920.1 ID=prot_D-herbacea_M_contig93.15920.1|Name=mRNA_D-herbacea_M_contig93.15920.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=243bp
GGRSGSRGRRRESPRDERQREYTSSEHQSRRVGNPAGTSADGRGGVRSRS
HEGTGRGEGASDRKRSGSPEAGGESKPKKKKDKKEKKKKEKKEKKEKKRD
HREGTSPPPGNDGGGSDGGRKRERSPSPAQHEHSTGGGGGSGRKSRRDGK
DRPAETEEKTRGVGAKPRVVNLSALKQPSSSALVTDNSGGSPKRWNPDVE
QLQDAGGGGGSSGKGKRARKSADTVSTLPGGSDFYTKRNRPR*
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mRNA from alignment at D-herbacea_M_contig93:989096..991500+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig93.15920.1 ID=mRNA_D-herbacea_M_contig93.15920.1|Name=mRNA_D-herbacea_M_contig93.15920.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=2405bp|location=Sequence derived from alignment at D-herbacea_M_contig93:989096..991500+ (Desmarestia herbacea DmunM male)
GGGGGACGGAGTGGAAGCCGCGGCAGGCGAAGAGAATCTCCCCGAGATGA
ACGGCAGCGGGAGTATACCTCTTCTGAACACCAGTCACGCCGTGTTGGAA
ACCCCGCTGGGACTAGCGCTGACGGTCGAGGCGGTGTGCGGAGCCGATCG
CACGAGGGGACGGGTCGGGGGGAAGGAGCGAGCGACAGAAAGAGGAGCGG
TTCTCCTGAGGCCGGTGGGGAGAGCAAGCCGAAGAAGAAAAAAGATAAAA
AGGAGAAGAAGAAAAAAGAGAAGAAGGAAAAGAAGGAAAAAAAGGTGGGT
GGTTGGGTTGGGTGGGCCTCGCACGAATGTTAGTATTGCGCGCACTACTG
TAGGTCACCGTTCGTGGTTGTGGACAACAAGAGCGGCACCAAAATGAACA
ACCGTAACGCGGCTGTCCCTTTTCAGCCCATTTGATATGACATTCTTCGC
ACATCAAGGTACACAGTTTTATTTGTTTTTGTTTTGCGTTTTTCGAGTTG
TCGTGTCTTATCATAGCTGTGCTTGCTTGCATCCCAGATGTTTCTTCTCT
GAAAAGAAGATTGATTACCTGGCGTATCGTAGCTGTAGCAACGCTCATTT
GTTCTTGCTGTGCAATCACCATCTACTATATCCGCGGCCATAAGAGACGG
TGTCAATCCCTCCTACCCCCAGCCCCATCCCTGAACGTCGCAGAAAAAAA
AATGAGTATAACTCCCTCCCGGCATCGTACCATAGTAGTGCGCCCCGTCG
ACCTCCAACGTTTTGATGATTTATTTGGCAAATCCGAATCGCCAACCATG
ACTGCAACTCGCCCCCCTCCCCATTTTCATGTCTTACCGCTGATGGAAAT
CCTTTTAGAGAGACCATCGAGAAGGCACTAGCCCCCCCCCCGGCAATGAC
GGAGGCGGTAGCGACGGGGGTAGAAAGCGAGAGCGGTCCCCTTCTCCCGC
TCAGCACGAGCATTCCACGGGCGGCGGTGGGGGTAGTGGGCGCAAGAGCA
GACGCGACGGCAAGGATAGGCCGGCGGAGACGGAGGAGAAGACGCGTGGA
GTGGGAGCAAAGCCTCGTGTGGTGCGTATGGGAAAATATGAGGGTGGGGG
GTGATGCTCCTTTTTGTTGCTTGCTGTAGTCGTATAACCATTGACCACGC
ATCCCTTTCGAGACGGACCACCGTTCCTACTCTTCATAGAGACATCTCCC
ATATTTAGGCGTTTTTGCCATATCTTACATAAAAACCATTTGCTTATCTT
ATCCCCTTGCGGTGTTGCCTTTTGTGGCAACCATCATCTCCTGGGATAGC
GATCGTTGGGGGGCGGTGGGGGTTCTCGTTTGTTTCTTGCCTTAGTCATG
TGACCATTGACCACGCATCCCTTTCGAGACGGGGCACCGTTCCTACTCCT
TGCAGAGACACCTCAAACATTTGGGCGCTTTTTGCTACGGTAGGGGTGGC
ACTTTTGGGCCCAATTTGTTCCGACTGATGGAGCTCCTCACCTGAGGAAC
TACTGCCAATATTTTTGACATTTTTTTCGTGGGATACGCTTTTAGTCGCA
ACGCACGTGACCCTTGGGATTTACGTTTGTCGGGTTGCGCGTACGTACAA
TTTTTGTTGAGAGTCTGTTTTTGGGTGAGACATAGAGCTCTTTATGTGAG
GAACCTCAGAAAATTTTGGGTAGCCAGAAAATTTGGGTACCCCCGTACGG
TGGCATGCCTCTAGTAAAGCTGACGAAACCCCAGTCATCACTCCCTCGTA
CTAATATTAAATGAACAAAAAAAACGTGCTACACCTTGCCAAGCAGGTAA
ACCTCTCGGCCCTAAAGCAGCCCAGCTCCTCTGCACTGGTGACCGATAAT
AGCGGCGGCAGCCCCAAGCGGTGGAACCCTGATGTCGAGCAGCTGCAAGA
CGCTGGTGGTGGCGGTGGTTCTTCGGGGAAGGGGAAAAGGGCTCGCAAGT
CTGCCGACACAGTTAGCACCCTTCCGGGAGGCAGCGACTTCTATACCAAG
CGGAACCGCCCACGCTAAAACATGATAGATTCTTTTTTAATGTTTTGGTG
TTTTGCGCTTTTGATTTGAGTGCTACGGGGGGGTTGATCGATCCCCCGGG
GGGGCGGGCAAGGCAGCGGGGTCATAAGCTGTTTTGTGCGAGGTAGGTGT
ACGGTTGGTTGGTGGGTGGGTAGGTACCGCTGTGTGAGCGCTGATTTGGC
GATGCTATGGGTGAAGCTAGCCGTTCGTTCTTTGAGCGGCGACTTTTTTA
GTAAAATTTGCATGAGGGTTTTTGTAGGGAACGCGGTTTTTACTGCTAGT
GCTTGGATATTTTCTAGGTGCTGGCTGGGTTGGTTTGAGGGGGAAGGAGG
TCATGTGGGAAAAAGTGACTCAAGTTTTGTTTGTCTCGTATATAGTCTAT
CATGG
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Coding sequence (CDS) from alignment at D-herbacea_M_contig93:989096..991500+

>mRNA_D-herbacea_M_contig93.15920.1 ID=mRNA_D-herbacea_M_contig93.15920.1|Name=mRNA_D-herbacea_M_contig93.15920.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1458bp|location=Sequence derived from alignment at D-herbacea_M_contig93:989096..991500+ (Desmarestia herbacea DmunM male)
GGGGGACGGAGTGGAAGCCGCGGCAGGCGAAGAGAATCTCCCCGAGATGA
ACGGCAGCGGGAGTATACCTCTTCTGAACACCAGTCACGCCGTGTTGGAA
ACCCCGCTGGGACTAGCGCTGACGGTCGAGGCGGTGTGCGGAGCCGATCG
CACGAGGGGACGGGTCGGGGGGAAGGAGCGAGCGACAGAAAGAGGAGCGG
TTCTCCTGAGGCCGGTGGGGAGAGCAAGCCGAAGAAGAAAAAAGATAAAA
AGGAGAAGAAGAAAAAAGAGAAGAAGGAAAAGAAGGAAAAAAAGGGGGGA
CGGAGTGGAAGCCGCGGCAGGCGAAGAGAATCTCCCCGAGATGAACGGCA
GCGGGAGTATACCTCTTCTGAACACCAGTCACGCCGTGTTGGAAACCCCG
CTGGGACTAGCGCTGACGGTCGAGGCGGTGTGCGGAGCCGATCGCACGAG
GGGACGGGTCGGGGGGAAGGAGCGAGCGACAGAAAGAGGAGCGGTTCTCC
TGAGGCCGGTGGGGAGAGCAAGCCGAAGAAGAAAAAAGATAAAAAGGAGA
AGAAGAAAAAAGAGAAGAAGGAAAAGAAGGAAAAAAAGAGAGACCATCGA
GAAGGCACTAGCCCCCCCCCCGGCAATGACGGAGGCGGTAGCGACGGGGG
TAGAAAGCGAGAGCGGTCCCCTTCTCCCGCTCAGCACGAGCATTCCACGG
GCGGCGGTGGGGGTAGTGGGCGCAAGAGCAGACGCGACGGCAAGGATAGG
CCGGCGGAGACGGAGGAGAAGACGCGTGGAGTGGGAGCAAAGCCTCGTGT
GAGAGACCATCGAGAAGGCACTAGCCCCCCCCCCGGCAATGACGGAGGCG
GTAGCGACGGGGGTAGAAAGCGAGAGCGGTCCCCTTCTCCCGCTCAGCAC
GAGCATTCCACGGGCGGCGGTGGGGGTAGTGGGCGCAAGAGCAGACGCGA
CGGCAAGGATAGGCCGGCGGAGACGGAGGAGAAGACGCGTGGAGTGGGAG
CAAAGCCTCGTGTGGTAAACCTCTCGGCCCTAAAGCAGCCCAGCTCCTCT
GCACTGGTGACCGATAATAGCGGCGGCAGCCCCAAGCGGTGGAACCCTGA
TGTCGAGCAGCTGCAAGACGCTGGTGGTGGCGGTGGTTCTTCGGGGAAGG
GGAAAAGGGCTCGCAAGTCTGCCGACACAGTTAGCACCCTTCCGGGAGGC
AGCGACTTCTATACCAAGCGGAACCGCCCACGCTAAGTAAACCTCTCGGC
CCTAAAGCAGCCCAGCTCCTCTGCACTGGTGACCGATAATAGCGGCGGCA
GCCCCAAGCGGTGGAACCCTGATGTCGAGCAGCTGCAAGACGCTGGTGGT
GGCGGTGGTTCTTCGGGGAAGGGGAAAAGGGCTCGCAAGTCTGCCGACAC
AGTTAGCACCCTTCCGGGAGGCAGCGACTTCTATACCAAGCGGAACCGCC
CACGCTAA
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