mRNA_D-herbacea_M_contig93.15919.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig93.15919.1
Unique NamemRNA_D-herbacea_M_contig93.15919.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig93.15919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig93contigD-herbacea_M_contig93:987188..988271 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size740
Cds size738
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935743.705207-CDS-D-herbacea_M_contig93:987187..9873321622935743.705207-CDS-D-herbacea_M_contig93:987187..987332Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 987188..987332 +
1690880684.5559857-CDS-D-herbacea_M_contig93:987187..9873321690880684.5559857-CDS-D-herbacea_M_contig93:987187..987332Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 987188..987332 +
1622935743.7286925-CDS-D-herbacea_M_contig93:987677..9882701622935743.7286925-CDS-D-herbacea_M_contig93:987677..988270Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 987678..988270 +
1690880684.5657423-CDS-D-herbacea_M_contig93:987677..9882701690880684.5657423-CDS-D-herbacea_M_contig93:987677..988270Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 987678..988270 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig93.15919.1prot_D-herbacea_M_contig93.15919.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig93 987188..988270 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig93.15919.1

>prot_D-herbacea_M_contig93.15919.1 ID=prot_D-herbacea_M_contig93.15919.1|Name=mRNA_D-herbacea_M_contig93.15919.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=246bp
GEQGGGDTSGGPSAEGVSSEKKAGEGGGQGQASDAASAGGGDGAGSEGAS
AAKQTPPRTDQSSGAAASGPSARDTTGAAGGADGAPSTAVDTATAATDDA
SKPRGGEDGAMVSSDSRKPPNQATTAASAEGGARKNAEAAVNDAGASQRA
AGADGPSGPPIPRGPRSQERAVTGEIMIGGGGVNPGDGNWGYNNQQRQDS
RDRGMPPGVDSHWQQQQQMGGMQGAGMMPDPHGWPPAQQMGPLSGG
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mRNA from alignment at D-herbacea_M_contig93:987188..988271+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig93.15919.1 ID=mRNA_D-herbacea_M_contig93.15919.1|Name=mRNA_D-herbacea_M_contig93.15919.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=1084bp|location=Sequence derived from alignment at D-herbacea_M_contig93:987188..988271+ (Desmarestia herbacea DmunM male)
GGCGAACAAGGAGGAGGCGATACGAGCGGTGGCCCCTCGGCTGAAGGGGT
TTCGAGTGAGAAGAAGGCCGGCGAGGGCGGCGGGCAGGGGCAAGCTTCTG
ATGCTGCTTCTGCTGGTGGCGGTGACGGTGCTGGTTCGGAAGGTGGTGAG
TCTCGAGCACTTGTTTGTTTTTACGTTTGTTTTTTGGGCGCTTCGTGTAC
AGTACGTAGTCGGAAGCTGAGGATGAATATTGATTGTGCCAGCGAGTGAA
TGAGTGGTCCTCAATTACTGTTGCAAACGAGAAGAAACTGAATCATGGCC
CTATTTTCATGACGGTGTCGCTTTTCTGGGGCGCACGGACTGCGGCAGAT
CGGTAACTCTGGTTGTGGCGGTGTTTTGCACTCCCCCTCCCTATCCTTGT
GGCATCGCTGAACGCCCCCCCTCCCCGCTCCCGTCGGAAATACCTCCATC
TTTGTACGGCGTTGTATGTTCGCGTGTGGCTCCGCTGCAGCATCCGCCGC
TAAGCAAACTCCTCCGCGGACCGACCAATCCTCCGGAGCTGCAGCAAGTG
GCCCGTCCGCGAGAGATACAACTGGTGCTGCAGGTGGTGCCGATGGTGCG
CCCTCTACTGCTGTAGATACCGCGACGGCTGCAACAGACGACGCCTCAAA
GCCTCGCGGGGGCGAGGACGGCGCAATGGTTAGCAGCGATTCAAGAAAAC
CGCCGAACCAAGCGACAACGGCAGCCAGCGCGGAAGGCGGTGCACGAAAG
AATGCAGAAGCGGCGGTAAACGACGCCGGGGCTTCGCAACGCGCCGCGGG
AGCTGACGGTCCCTCCGGACCGCCGATTCCGAGGGGGCCTCGCAGCCAAG
AGAGGGCCGTGACGGGCGAGATAATGATTGGCGGCGGAGGCGTCAACCCC
GGCGACGGTAATTGGGGATACAACAACCAGCAGAGACAAGACAGCCGCGA
CCGTGGCATGCCGCCGGGTGTGGACTCTCACTGGCAGCAGCAGCAGCAGA
TGGGTGGAATGCAGGGCGCAGGGATGATGCCGGACCCGCACGGTTGGCCC
CCCGCGCAACAAATGGGGCCGCTCAGTGGTGGTG
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Coding sequence (CDS) from alignment at D-herbacea_M_contig93:987188..988271+

>mRNA_D-herbacea_M_contig93.15919.1 ID=mRNA_D-herbacea_M_contig93.15919.1|Name=mRNA_D-herbacea_M_contig93.15919.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1476bp|location=Sequence derived from alignment at D-herbacea_M_contig93:987188..988271+ (Desmarestia herbacea DmunM male)
GGCGAACAAGGAGGAGGCGATACGAGCGGTGGCCCCTCGGCTGAAGGGGT
TTCGAGTGAGAAGAAGGCCGGCGAGGGCGGCGGGCAGGGGCAAGCTTCTG
ATGCTGCTTCTGCTGGTGGCGGTGACGGTGCTGGTTCGGAAGGTGGGCGA
ACAAGGAGGAGGCGATACGAGCGGTGGCCCCTCGGCTGAAGGGGTTTCGA
GTGAGAAGAAGGCCGGCGAGGGCGGCGGGCAGGGGCAAGCTTCTGATGCT
GCTTCTGCTGGTGGCGGTGACGGTGCTGGTTCGGAAGGTGCATCCGCCGC
TAAGCAAACTCCTCCGCGGACCGACCAATCCTCCGGAGCTGCAGCAAGTG
GCCCGTCCGCGAGAGATACAACTGGTGCTGCAGGTGGTGCCGATGGTGCG
CCCTCTACTGCTGTAGATACCGCGACGGCTGCAACAGACGACGCCTCAAA
GCCTCGCGGGGGCGAGGACGGCGCAATGGTTAGCAGCGATTCAAGAAAAC
CGCCGAACCAAGCGACAACGGCAGCCAGCGCGGAAGGCGGTGCACGAAAG
AATGCAGAAGCGGCGGTAAACGACGCCGGGGCTTCGCAACGCGCCGCGGG
AGCTGACGGTCCCTCCGGACCGCCGATTCCGAGGGGGCCTCGCAGCCAAG
AGAGGGCCGTGACGGGCGAGATAATGATTGGCGGCGGAGGCGTCAACCCC
GGCGACGGTAATTGGGGATACAACAACCAGCAGAGACAAGACAGCCGCGA
CCGTGGCATGCCGCCGGGTGTGGACTCTCACTGGCAGCAGCAGCAGCAGA
TGGGTGGAATGCAGGGCGCAGGGATGATGCCGGACCCGCACGGTTGGCCC
CCCGCGCAACAAATGGGGCCGCTCAGTGGTGGTCATCCGCCGCTAAGCAA
ACTCCTCCGCGGACCGACCAATCCTCCGGAGCTGCAGCAAGTGGCCCGTC
CGCGAGAGATACAACTGGTGCTGCAGGTGGTGCCGATGGTGCGCCCTCTA
CTGCTGTAGATACCGCGACGGCTGCAACAGACGACGCCTCAAAGCCTCGC
GGGGGCGAGGACGGCGCAATGGTTAGCAGCGATTCAAGAAAACCGCCGAA
CCAAGCGACAACGGCAGCCAGCGCGGAAGGCGGTGCACGAAAGAATGCAG
AAGCGGCGGTAAACGACGCCGGGGCTTCGCAACGCGCCGCGGGAGCTGAC
GGTCCCTCCGGACCGCCGATTCCGAGGGGGCCTCGCAGCCAAGAGAGGGC
CGTGACGGGCGAGATAATGATTGGCGGCGGAGGCGTCAACCCCGGCGACG
GTAATTGGGGATACAACAACCAGCAGAGACAAGACAGCCGCGACCGTGGC
ATGCCGCCGGGTGTGGACTCTCACTGGCAGCAGCAGCAGCAGATGGGTGG
AATGCAGGGCGCAGGGATGATGCCGGACCCGCACGGTTGGCCCCCCGCGC
AACAAATGGGGCCGCTCAGTGGTGGT
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