mRNA_D-herbacea_M_contig93.15917.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig93.15917.1
Unique NamemRNA_D-herbacea_M_contig93.15917.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig93.15917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig93contigD-herbacea_M_contig93:983614..984257 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size297
Cds size297
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935743.6157641-CDS-D-herbacea_M_contig93:983613..9837411622935743.6157641-CDS-D-herbacea_M_contig93:983613..983741Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 983614..983741 +
1690880684.5347502-CDS-D-herbacea_M_contig93:983613..9837411690880684.5347502-CDS-D-herbacea_M_contig93:983613..983741Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 983614..983741 +
1622935743.65715-CDS-D-herbacea_M_contig93:984088..9842571622935743.65715-CDS-D-herbacea_M_contig93:984088..984257Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 984089..984257 +
1690880684.546093-CDS-D-herbacea_M_contig93:984088..9842571690880684.546093-CDS-D-herbacea_M_contig93:984088..984257Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 984089..984257 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig93.15917.1prot_D-herbacea_M_contig93.15917.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig93 983614..984257 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig93.15917.1

>prot_D-herbacea_M_contig93.15917.1 ID=prot_D-herbacea_M_contig93.15917.1|Name=mRNA_D-herbacea_M_contig93.15917.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=99bp
MGDGGNGRDLGGNSKKQKRERGMMQQSNAGGGPGSGPPPGMARPPGLNGP
MGGPSGSGSGWEGGPMGRAGPGANSPDGPSGAVGNKPPPFFDEAPGGGP
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mRNA from alignment at D-herbacea_M_contig93:983614..984257+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig93.15917.1 ID=mRNA_D-herbacea_M_contig93.15917.1|Name=mRNA_D-herbacea_M_contig93.15917.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=644bp|location=Sequence derived from alignment at D-herbacea_M_contig93:983614..984257+ (Desmarestia herbacea DmunM male)
ATGGGGGATGGCGGGAATGGTCGGGACCTTGGCGGGAACAGCAAGAAGCA
GAAGAGGGAGAGAGGGATGATGCAGCAGTCGAACGCGGGAGGAGGGCCTG
GCTCTGGTCCGCCGCCTGGCATGGCAAGGTTCGTCCGTTTTTTGTTTTGT
TATGGTGGTGGTCGTGGGGACTTTTAGTGACGTACGTTGGTTGATTTTTT
GTTGTTGTGTTTTGGTCGTGGTTGTCGTCTGTAGATCACCCACGGCTTTC
TTTGCAATCGCGCCCTCCTATATAGCAAGCAGAATATTTTTATGTAAGAT
ATGGCAAACAAAAACGTAGAGAGCGCCCAGAAGTTGGAGGTTTCTCTCAT
TAGGAGTAGGAACGGTGCTCCGCCTAGAAAGGGATATGTGGTAAAAGCAA
TGGTCAAATGACCTAAGGCAAGCAAACAAATGAGAACCCCCCCCGTCCCC
TTCCCTCCCCCTTACGCTACGCCAGGCCTCCTGGATTGAACGGACCGATG
GGCGGTCCAAGCGGAAGTGGTTCCGGTTGGGAGGGTGGTCCCATGGGAAG
AGCCGGCCCCGGTGCCAACAGCCCCGACGGGCCAAGCGGTGCCGTCGGTA
ACAAACCGCCGCCTTTCTTCGACGAGGCACCGGGCGGCGGTCCA
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Coding sequence (CDS) from alignment at D-herbacea_M_contig93:983614..984257+

>mRNA_D-herbacea_M_contig93.15917.1 ID=mRNA_D-herbacea_M_contig93.15917.1|Name=mRNA_D-herbacea_M_contig93.15917.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=594bp|location=Sequence derived from alignment at D-herbacea_M_contig93:983614..984257+ (Desmarestia herbacea DmunM male)
ATGGGGGATGGCGGGAATGGTCGGGACCTTGGCGGGAACAGCAAGAAGCA
GAAGAGGGAGAGAGGGATGATGCAGCAGTCGAACGCGGGAGGAGGGCCTG
GCTCTGGTCCGCCGCCTGGCATGGCAAGATGGGGGATGGCGGGAATGGTC
GGGACCTTGGCGGGAACAGCAAGAAGCAGAAGAGGGAGAGAGGGATGATG
CAGCAGTCGAACGCGGGAGGAGGGCCTGGCTCTGGTCCGCCGCCTGGCAT
GGCAAGGCCTCCTGGATTGAACGGACCGATGGGCGGTCCAAGCGGAAGTG
GTTCCGGTTGGGAGGGTGGTCCCATGGGAAGAGCCGGCCCCGGTGCCAAC
AGCCCCGACGGGCCAAGCGGTGCCGTCGGTAACAAACCGCCGCCTTTCTT
CGACGAGGCACCGGGCGGCGGTCCAGCCTCCTGGATTGAACGGACCGATG
GGCGGTCCAAGCGGAAGTGGTTCCGGTTGGGAGGGTGGTCCCATGGGAAG
AGCCGGCCCCGGTGCCAACAGCCCCGACGGGCCAAGCGGTGCCGTCGGTA
ACAAACCGCCGCCTTTCTTCGACGAGGCACCGGGCGGCGGTCCA
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