mRNA_D-herbacea_M_contig93.15892.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig93.15892.1
Unique NamemRNA_D-herbacea_M_contig93.15892.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
[Close]
BLAST of mRNA_D-herbacea_M_contig93.15892.1 vs. uniprot
Match: D8LMG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMG0_ECTSI)

HSP 1 Score: 401 bits (1031), Expect = 4.350e-137
Identity = 196/222 (88.29%), Postives = 216/222 (97.30%), Query Frame = 1 
Query:  385 MDLEATADQMVTLLTVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATCAFGVAFGARGIWTYVGLLLHSLGVHWVLCGVVMASLCRWIANSRLLQHRSHSVEQEVEWMYASDIHCNSFFPLFVLLYVLQLLLLPLLLGRSLWALVLSNTLYALAFSVYFYVTHLGYRSLPFLHKTEVFLYPVVGVIMLLLLSIVLLPFGVKVNATLAMAKLYFVD 1050
            MD+EATADQMVTLL+VNPQRVYKTAYYRKQTKNHWARDDPGFAVLQ FFLVVAT AFGVAFGARG+WTYVGLLLHS+GVHW+LCGVVM+SLCRWIANSRLLQHRSHSVEQEVEWMYA DIH NSFFPLFV LYV+QLLLLPLL+G+S+W+L+L+NTLYA+AFSVYFYVTHLGYRSLPFLH TEVFLYPVVG+IMLLLLSI+LLPFG+++NATLAMAKLYF+D
Sbjct:    1 MDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQTFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIILLPFGIRINATLAMAKLYFLD 222
[Close]
BLAST of mRNA_D-herbacea_M_contig93.15892.1 vs. uniprot
Match: A0A835Z945_9STRA (UNC-50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z945_9STRA)

HSP 1 Score: 294 bits (752), Expect = 2.630e-94
Identity = 150/261 (57.47%), Postives = 192/261 (73.56%), Query Frame = 1 
Query:  268 MLP-SSVSGRYAPYRHGYTDSVSVSWNLPDYLRRMFDYHQMDLEATADQMVTLLTVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATCAFGVAFGARGIWTYVGLLLHSLGVHWVLCGVVMASLCRWIANSRLLQHRSHSVEQEVEWMYASDIHCNSFFPLFVLLYVLQLLLLPLLLGRSLWALVLSNTLYALAFSVYFYVTHLGYRSLPFLHKTEVFLYPVVGVIMLLLLSIVLLPFGVKVNATLAMAKLYFV 1047
            MLP    +GRYAP+R     S     ++P+Y  R+FD+ Q+D+E+  DQMVTLL++NP RVYKTAYYRKQTKN WARDDP FAVLQ  F V    A+G+AFG R  W Y+ L+ +++ +HW+L GV  A+  R +AN+ +L  R+HSVEQ VEW+YA DIHCN+FF LF+++YV Q LLLP+LLG S+ AL+LSN LYAL F  YFY+THLGYRSLPFL KTE FLYPVV V+ LL  S++L   G++VN T  MA +YF+
Sbjct:    1 MLPLDGRNGRYAPHRRH--SSYGGDRSVPEYFARLFDFKQLDMESACDQMVTLLSLNPGRVYKTAYYRKQTKNQWARDDPAFAVLQLAFSVAGAVAYGMAFGLRAFWGYIALIANAVLLHWLLFGVAAATAGRALANAHMLVRRAHSVEQRVEWLYAFDIHCNAFFMLFIVVYVGQFLLLPVLLGPSVGALLLSNALYALGFGAYFYITHLGYRSLPFLCKTETFLYPVVAVVTLLATSVLLAALGMRVNMTRVMAHVYFL 259
[Close]
BLAST of mRNA_D-herbacea_M_contig93.15892.1 vs. uniprot
Match: A0A7R9YBX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBX5_9STRA)

HSP 1 Score: 250 bits (638), Expect = 3.320e-77
Identity = 133/253 (52.57%), Postives = 177/253 (69.96%), Query Frame = 1 
Query:  268 MLPSSVSGRYAPYRHGYTDSVSVSW--NLPDYLRRMFDYHQMDLEATADQMVTLLTVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATCAFGVAFGARGIWTYVGLLLHSLGVHWVLCGVVMASLCRWIANSRLLQHRSHSVEQEVEWMYASDIHCNSFFPLFVLLYVLQLLLLPLLLGRSLWALVLSNTLYALAFSVYFYVTHLGYRSLPFLHKTEVFLYPVVGVIMLLLLSIVLLPFGVKVNAT 1020
            MLP +  G       GYT +  VS   ++P+YL R+ D+  MD EAT DQM+TL + +P RVYKT +YRKQ KN WARDDP FAV Q   L V   A+ +AF    +  Y+ L+L+ + V W L G V+A++  ++AN  LLQ  SHSV Q+VEW+YA DIHCN+FFPLF+L++VLQ  LLP+LL +   +++LSN LYA AFSVYFY+THLGYR+LPFL KTEV+LYP+  V +  +LS+ + P GV++NAT
Sbjct:    5 MLPLNARGV------GYTRATRVSLPASVPEYLCRVLDFRSMDFEATLDQMLTLASSDPGRVYKTNFYRKQMKNQWARDDPAFAVAQVLLLSVVAVAYALAFRVDSLSGYLSLILYCVVVDWFLFGCVVATIGWFVANKYLLQSHSHSVAQKVEWLYAFDIHCNAFFPLFLLVHVLQFFLLPILLLKVYPSMILSNLLYAAAFSVYFYITHLGYRALPFLTKTEVYLYPIGVVALAFVLSLFIAPLGVRINAT 251
[Close]
BLAST of mRNA_D-herbacea_M_contig93.15892.1 vs. uniprot
Match: A0A7S0G7V0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G7V0_9STRA)

HSP 1 Score: 249 bits (637), Expect = 1.540e-76
Identity = 134/262 (51.15%), Postives = 182/262 (69.47%), Query Frame = 1 
Query:  280 SVSGRYAPYRHGYTDSVSVSWNLPDYLRRMFDYHQMDLEATADQMVTLLTVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATCAFGVAFGARGIWTYVGL--LLHSLGVHWVLCGVVMASLCRWIANSRLL-QH----RSHSVEQEVEWMYASDIHCNSFFPLFVLLYVLQLLLLPLLLGRSLWALVLSNTLYALAFSVYFYVTHLGYRSLPFLHKTEVFLYPVVGVIMLLLLSIVLLPFGVKVNATLAMAKLYF 1044
            S+SG        Y    ++S++   YL R+ D+ QMD+++  DQM TL T+ PQRVYKT+YYRKQTK+HW+RDDP FA+LQ  FL VA+ A+ +AF   G   Y  L    +++ ++++L GVV++++CR IAN+ L  QH     SH V Q VEW+YA DIHCN+FFP FVL+Y  Q  LLP++L R L +L++SNTLYALAF  YFY+THLGYR+LPFL  TEVFL+PV GV  + +L+ +  PFG+  NA+  +A LYF
Sbjct:   31 SISGGRGSASSSYGGMSAMSYDPQQYLHRILDFQQMDVQSALDQMRTLCTLQPQRVYKTSYYRKQTKDHWSRDDPAFAILQIGFLAVASLAYCIAFRVSGNMIYGTLRFAFNNIIINYLLSGVVISTICRSIANTYLTHQHPRNSNSHVVRQGVEWLYAFDIHCNAFFPFFVLIYCAQFFLLPVVLQRGLVSLIVSNTLYALAFGWYFYITHLGYRALPFLSGTEVFLFPVAGVAAIYVLNFIGFPFGLGFNASRLVAHLYF 292
[Close]
BLAST of mRNA_D-herbacea_M_contig93.15892.1 vs. uniprot
Match: A0A7S2ENT4_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ENT4_TRICV)

HSP 1 Score: 249 bits (637), Expect = 2.700e-76
Identity = 136/244 (55.74%), Postives = 174/244 (71.31%), Query Frame = 1 
Query:  328 VSVSWNLPDYLRRMFDYHQMDLEATADQMVTLLTVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATCAFGVAFGARGIW----TYVGLLLHSLGVHWVLCGVVMASLCRWIANSRLLQHRSHS-VEQEVEWMYASDIHCNSFFPLFVLLYVLQLLLLPLLLGRSLWALVLSNTLYALAFSVYFYVTHLGYRSLPFLHKTEVFLYPVVGVIMLLLLSIVLLPFGVKVNATLAMAKLYF 1044
            ++ S     YL R+ D  QMD ++  DQM TLLT  PQRVYKTAYYRKQTKNHWARDDP FA LQ  FL VA+ A+ VAFG+ G+       +G  L S+ ++W+  G+V AS+CR I+N+ L+ H S + V Q VE++YA DIHCN+FFPLFVL+Y +Q  LLP++LGR L AL+LSN L+A AF  YFYVTHLGYR+LPFL  TEVFL+PV  V++L  L+++  PFG   NA+  MA +YF
Sbjct:   67 LTSSMTPSQYLSRILDVGQMDFQSALDQMKTLLTPQPQRVYKTAYYRKQTKNHWARDDPAFAALQIAFLSVASLAYSVAFGSDGLGGTLTAALGFGLKSILINWLAVGLVTASVCRSISNNHLVVHSSAAHVRQRVEFLYAFDIHCNAFFPLFVLIYGVQFFLLPVVLGRGLMALLLSNALFAAAFGWYFYVTHLGYRALPFLTNTEVFLFPVALVVLLFFLNLIGHPFGFGWNASRIMAYVYF 310
[Close]
BLAST of mRNA_D-herbacea_M_contig93.15892.1 vs. uniprot
Match: A0A7S1Y6X4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y6X4_9STRA)

HSP 1 Score: 246 bits (628), Expect = 6.640e-76
Identity = 130/233 (55.79%), Postives = 167/233 (71.67%), Query Frame = 1 
Query:  355 YLRRMFDYHQMDLEATADQMVTLLTVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATCAFGVAFGARGIWTYVGLLLHSLGVHWVLCGVVMASLCRWIANSRLLQHRSHS-VEQEVEWMYASDIHCNSFFPLFVLLYVLQLLLLPLLLGRSLWALVLSNTLYALAFSVYFYVTHLGYRSLPFLHKTEVFLYPVVGVIMLLLLSIVLLPFGVKVNATLAMAKLYFVD 1050
            YL R+ D  QMD ++  DQM +LL   P  VYKTAYYRKQTKNHWARDDP F VLQA FL+V+  A+ VAF A  I T++G L+HSL  +W++ G ++ S+ R +AN  L  H+S S V Q VEW+YA DIHCN+FFPLF +LY +Q  LLPL+LG S  ALV++NTLYA+AFS Y+Y+THLGYRSLPFL  TEVF++P+  VI+L +L++V  PF    N     A++Y  D
Sbjct:   10 YLARLTDVRQMDAQSALDQMKSLLGSRPHTVYKTAYYRKQTKNHWARDDPAFCVLQAIFLLVSVVAYSVAFKAS-IGTFLGFLIHSLFWNWLVSGALVCSILREVANRHLTVHQSTSHVRQSVEWLYAFDIHCNAFFPLFCVLYGVQFFLLPLILGNSFLALVVANTLYAVAFSWYWYITHLGYRSLPFLTNTEVFMFPIAAVILLFVLNLVGYPFNFGWNFARVFAQIYLRD 241
[Close]
BLAST of mRNA_D-herbacea_M_contig93.15892.1 vs. uniprot
Match: A0A7S2U7N4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7N4_9STRA)

HSP 1 Score: 248 bits (632), Expect = 7.590e-76
Identity = 131/246 (53.25%), Postives = 174/246 (70.73%), Query Frame = 1 
Query:  313 GYTDSVSVSWNLPDYLRRMFDYHQMDLEATADQMVTLLTVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATCAFGVAFGARG-IWTYVGLLLHSLGVHWVLCGVVMASLCRWIANSRLLQHRSHS-VEQEVEWMYASDIHCNSFFPLFVLLYVLQLLLLPLLLGRSLWALVLSNTLYALAFSVYFYVTHLGYRSLPFLHKTEVFLYPVVGVIMLLLLSIVLLPFGVKVNATLAMAKLYF 1044
            G   S+    +   YL R+ D  QMD+++  DQM TL T++PQRVYKT+YYRKQTKNHWARDDP F  LQ  FL +A+ A+ VAF     + + +G  + S+ ++W   G+++AS+ R  AN  L  H+S S V Q VEW+YA DIHCN+FFPLFV LY LQ  LLP++LG+SL +LVL+NTLYA AFS YFY+THLGYR+LPFL  TEVFL+P+ G++++ L+++V  PFG   NA+  MA  YF
Sbjct:   43 GALSSLGTVMSPAQYLARLVDVQQMDVQSALDQMRTLCTLSPQRVYKTSYYRKQTKNHWARDDPAFCFLQMVFLALASIAYCVAFREDSLVSSTIGFAIKSILINWFGLGILIASIGREFANRHLTVHQSSSHVRQGVEWLYAFDIHCNAFFPLFVALYGLQFFLLPIVLGKSLLSLVLANTLYAAAFSWYFYITHLGYRALPFLSSTEVFLFPIAGIMIVYLINLVGYPFGFGWNASRIMAHFYF 288
[Close]
BLAST of mRNA_D-herbacea_M_contig93.15892.1 vs. uniprot
Match: A0A6V1WU61_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WU61_HETAK)

HSP 1 Score: 246 bits (629), Expect = 9.010e-76
Identity = 129/259 (49.81%), Postives = 176/259 (67.95%), Query Frame = 1 
Query:  268 MLPSSVSGRYAPYRHGYTDSVSVSWNLPDYLRRMFDYHQMDLEATADQMVTLLTVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATCAFGVAFGARGIWTYVGLLLHSLGVHWVLCGVVMASLCRWIANSRLLQHRSHSVEQEVEWMYASDIHCNSFFPLFVLLYVLQLLLLPLLLGRSLWALVLSNTLYALAFSVYFYVTHLGYRSLPFLHKTEVFLYPVVGVIMLLLLSIVLLPFGVKVNATLAMAKLYF 1044
            MLP  + GR A Y +    + S  ++  +YLRR++D++QMD EA  DQ +TLL+ NP +VYK++YYRKQTKN WARDDP FAV+Q   L+ + CA+GVAF A   W +  ++   +G+ +V  GV +ASL  W AN+RL Q R+ +V Q VEW +A D HCN+  P F+LL+V+Q  LLPLL+GRS  AL  +NTLYA +   Y YVTHLGYR+LPFL  TEV+LYP   +I+L ++S++L   GV  N T  ++  YF
Sbjct:    1 MLP--LDGRTARYSNFSNRAYSNGYSSNEYLRRIYDFNQMDFEAAFDQFMTLLSRNPAQVYKSSYYRKQTKNQWARDDPAFAVIQILLLIASACAYGVAFSAGSFWHFFTIIFKMVGIQYVGVGVFIASLGSWFANARLRQVRAGTVAQRVEWAFAWDAHCNAHAPAFLLLHVVQYFLLPLLMGRSWLALAAANTLYAASLLAYVYVTHLGYRALPFLSNTEVYLYPAGVIILLYVISLLLGLVGVSCNMTRIVSHFYF 257
[Close]
BLAST of mRNA_D-herbacea_M_contig93.15892.1 vs. uniprot
Match: A0A7S1GMY0_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GMY0_CYCTE)

HSP 1 Score: 241 bits (615), Expect = 7.410e-74
Identity = 126/230 (54.78%), Postives = 171/230 (74.35%), Query Frame = 1 
Query:  355 YLRRMFDYHQMDLEATADQMVTLLTVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATCAFGVAFGARGIWTYVGLLLHSLGVHWVLCGVVMASLCRWIANSRLLQHRSHS-VEQEVEWMYASDIHCNSFFPLFVLLYVLQLLLLPLLLGRSLWALVLSNTLYALAFSVYFYVTHLGYRSLPFLHKTEVFLYPVVGVIMLLLLSIVLLPFGVKVNATLAMAKLY 1041
            YL R+ D+ QMD+++  DQM +LL   P  VYKT+YYRKQTKNHWARDDP F VLQA FL VA+ A+ VAF +  +   +G LLH++  +W++ G ++A++ R +AN  L  H+S S V+Q VEW+YA DIHCN+FFPLF LLY +Q  LLPL+LG+SL A +LSNTLYA AFS Y+Y+THLGYR+LPFL  TEVFL+P+ G+ ++ +L++V  PF +  NA+  +A +Y
Sbjct:   21 YLARLTDFRQMDIQSALDQMRSLLGGRPHVVYKTSYYRKQTKNHWARDDPAFCVLQAVFLFVASLAYAVAFRST-LSGGMGFLLHTILWNWLVAGTIVATIARELANRHLCVHQSTSHVKQTVEWLYAFDIHCNAFFPLFCLLYGVQFFLLPLVLGKSLLAFLLSNTLYAAAFSWYWYITHLGYRALPFLSNTEVFLFPIAGIALVFVLNLVGYPFDMGWNASRLLATIY 249
[Close]
BLAST of mRNA_D-herbacea_M_contig93.15892.1 vs. uniprot
Match: A0A448ZP33_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZP33_9STRA)

HSP 1 Score: 240 bits (612), Expect = 4.500e-73
Identity = 125/241 (51.87%), Postives = 174/241 (72.20%), Query Frame = 1 
Query:  325 SVSVSWNLPDYLRRMFDYHQMDLEATADQMVTLLTVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATCAFGVAFGARGIWTYVGLLLHSLGVHWVLCGVVMASLCRWIANSRLLQHRSHS-VEQEVEWMYASDIHCNSFFPLFVLLYVLQLLLLPLLLGRSLWALVLSNTLYALAFSVYFYVTHLGYRSLPFLHKTEVFLYPVVGVIMLLLLSIVLLPFGVKVNATLAMAKLYF 1044
            SVS S +   YL R+ D+ QMD+++  DQM TLL+  P  VYKT+YYRKQTKNHWARDDP FA L+  FL ++  A+ ++F    I   +   L+S+  HW+  G+++A+  R +AN  L   +S+S V Q VEW+YA DIHCN+FFP+FVLLY +Q  LLPL+LG+SL+AL+ SNTLYA AF+ Y+Y+THLGYR+LPFL +TEVFL+P+  + ++ +L++V  PFG+  NA+  MA +YF
Sbjct:   33 SVSASSSHAQYLSRLIDFKQMDIQSALDQMKTLLSTRPHVVYKTSYYRKQTKNHWARDDPAFAALELIFLTISCIAYAISFRVP-ISEGIAFFLYSVLFHWLGFGLIIATAGREMANRHLTDTKSNSHVRQSVEWLYAFDIHCNAFFPVFVLLYGVQFFLLPLVLGKSLFALIASNTLYAGAFAWYWYITHLGYRALPFLSQTEVFLFPIAAIGLVYVLNLVGYPFGMGWNASRIMAHIYF 272
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig93.15892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMG0_ECTSI4.350e-13788.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z945_9STRA2.630e-9457.47UNC-50 n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
A0A7R9YBX5_9STRA3.320e-7752.57Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S0G7V0_9STRA1.540e-7651.15Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2ENT4_TRICV2.700e-7655.74Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A7S1Y6X4_9STRA6.640e-7655.79Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2U7N4_9STRA7.590e-7653.25Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6V1WU61_HETAK9.010e-7649.81Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1GMY0_CYCTE7.410e-7454.78Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A448ZP33_9STRA4.500e-7351.87Uncharacterized protein n=2 Tax=Pseudo-nitzschia T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig93contigD-herbacea_M_contig93:236128..250000 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score396.7
Seed ortholog evalue8.2e-108
Seed eggNOG ortholog2880.D8LMG0
Preferred nameUNC50
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005637,GO:0005737,GO:0005794,GO:0006810,GO:0006937,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0019866,GO:0023052,GO:0030173,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031503,GO:0031965,GO:0031967,GO:0031975,GO:0031984,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044057,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051641,GO:0051668,GO:0051716,GO:0065007,GO:0090257,GO:0097120,GO:0097159,GO:0098588,GO:0098791,GO:1901363
EggNOG free text desc.protein transport
EggNOG OGsKOG3012@1,KOG3012@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons9
Model size1352
Cds size786
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935746.2811105-UTR-D-herbacea_M_contig93:236127..2364261622935746.2811105-UTR-D-herbacea_M_contig93:236127..236426Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig93 236128..236426 -
1690880685.7522264-UTR-D-herbacea_M_contig93:236127..2364261690880685.7522264-UTR-D-herbacea_M_contig93:236127..236426Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig93 236128..236426 -
1622935746.432206-UTR-D-herbacea_M_contig93:245553..2455561622935746.432206-UTR-D-herbacea_M_contig93:245553..245556Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig93 245554..245556 -
1690880685.852964-UTR-D-herbacea_M_contig93:245553..2455561690880685.852964-UTR-D-herbacea_M_contig93:245553..245556Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig93 245554..245556 -
1622935746.4477258-UTR-D-herbacea_M_contig93:249736..2500001622935746.4477258-UTR-D-herbacea_M_contig93:249736..250000Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig93 249737..250000 -
1690880685.8633773-UTR-D-herbacea_M_contig93:249736..2500001690880685.8633773-UTR-D-herbacea_M_contig93:249736..250000Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig93 249737..250000 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935746.293442-CDS-D-herbacea_M_contig93:236426..2365721622935746.293442-CDS-D-herbacea_M_contig93:236426..236572Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 236427..236572 -
1690880685.7639775-CDS-D-herbacea_M_contig93:236426..2365721690880685.7639775-CDS-D-herbacea_M_contig93:236426..236572Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 236427..236572 -
1622935746.3086312-CDS-D-herbacea_M_contig93:237174..2372891622935746.3086312-CDS-D-herbacea_M_contig93:237174..237289Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 237175..237289 -
1690880685.7734582-CDS-D-herbacea_M_contig93:237174..2372891690880685.7734582-CDS-D-herbacea_M_contig93:237174..237289Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 237175..237289 -
1622935746.328778-CDS-D-herbacea_M_contig93:239767..2398971622935746.328778-CDS-D-herbacea_M_contig93:239767..239897Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 239768..239897 -
1690880685.790686-CDS-D-herbacea_M_contig93:239767..2398971690880685.790686-CDS-D-herbacea_M_contig93:239767..239897Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 239768..239897 -
1622935746.3461232-CDS-D-herbacea_M_contig93:241055..2411801622935746.3461232-CDS-D-herbacea_M_contig93:241055..241180Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 241056..241180 -
1690880685.8029263-CDS-D-herbacea_M_contig93:241055..2411801690880685.8029263-CDS-D-herbacea_M_contig93:241055..241180Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 241056..241180 -
1622935746.3640008-CDS-D-herbacea_M_contig93:243477..2435421622935746.3640008-CDS-D-herbacea_M_contig93:243477..243542Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 243478..243542 -
1690880685.8134837-CDS-D-herbacea_M_contig93:243477..2435421690880685.8134837-CDS-D-herbacea_M_contig93:243477..243542Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 243478..243542 -
1622935746.384569-CDS-D-herbacea_M_contig93:244468..2444941622935746.384569-CDS-D-herbacea_M_contig93:244468..244494Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 244469..244494 -
1690880685.8228154-CDS-D-herbacea_M_contig93:244468..2444941690880685.8228154-CDS-D-herbacea_M_contig93:244468..244494Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 244469..244494 -
1622935746.399579-CDS-D-herbacea_M_contig93:245035..2450971622935746.399579-CDS-D-herbacea_M_contig93:245035..245097Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 245036..245097 -
1690880685.8321638-CDS-D-herbacea_M_contig93:245035..2450971690880685.8321638-CDS-D-herbacea_M_contig93:245035..245097Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 245036..245097 -
1622935746.4186263-CDS-D-herbacea_M_contig93:245436..2455531622935746.4186263-CDS-D-herbacea_M_contig93:245436..245553Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 245437..245553 -
1690880685.842434-CDS-D-herbacea_M_contig93:245436..2455531690880685.842434-CDS-D-herbacea_M_contig93:245436..245553Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig93 245437..245553 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig93.15892.1prot_D-herbacea_M_contig93.15892.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig93 236427..245553 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig93.15892.1

>prot_D-herbacea_M_contig93.15892.1 ID=prot_D-herbacea_M_contig93.15892.1|Name=mRNA_D-herbacea_M_contig93.15892.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=262bp
MLPSSVSGRYAPYRHGYTDSVSVSWNLPDYLRRMFDYHQMDLEATADQMV
TLLTVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATCAFGVAF
GARGIWTYVGLLLHSLGVHWVLCGVVMASLCRWIANSRLLQHRSHSVEQE
VEWMYASDIHCNSFFPLFVLLYVLQLLLLPLLLGRSLWALVLSNTLYALA
FSVYFYVTHLGYRSLPFLHKTEVFLYPVVGVIMLLLLSIVLLPFGVKVNA
TLAMAKLYFVD*
back to top

mRNA from alignment at D-herbacea_M_contig93:236128..250000-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig93.15892.1 ID=mRNA_D-herbacea_M_contig93.15892.1|Name=mRNA_D-herbacea_M_contig93.15892.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=13873bp|location=Sequence derived from alignment at D-herbacea_M_contig93:236128..250000- (Desmarestia herbacea DmunM male)
AGACGAGCAAGAAGGAACAGGCGGCCTCGGTGCAGGAAGGAGCAGTCATC
GAAGTACCTTCTTGTTCATTGTACAGTTATCTCTTCGGTAGGGAAGCCTA
ATTGTGCAGCAGCTGGCACAATCGAGGGGCGGCATTGAGTGCTCACATCC
CAGAGGGAGGGCTCTCTCGTGGAGGGATTTGGGGTCTGCTGGGTGTTCGG
TGTTGGGTGCTGCCCTTTTTGGTCGAACGAACGCGCCCATTGACCGCCGT
GGCATCCACTTGAGGTGATAGAATCATATATGCCTTGCTTCGTTTTCTTA
TGCATCCTTCTGTTGCATATGATTGTTCAATACATCGTTTTTTATTCGCT
CCGCAATGTTTGCCTACGCCTCCTGTCTGTGTACGTCGTACTCTATACGA
GTACTGACTACTATTAATACTACAGCTCGTATCATACTGTTGTTGTACTA
CTACTATTGTTACCTTACGGCCCAAGCTGTAAATCATGAAATGCCACGGG
GCAAGATCCCTGCCACGGGCCAAGATCCCTACGAGTACGAGTACTTGTAG
CTCGTGCAAGACGCCAGTACTGTACAGGGCAGATAGATATTGGTTTGCTT
CGGTGCATAATCTGTATTCCGTTGCTTACCGAATTAGTGCACTTTATTCA
TTGCCTGCTTGTGAAGATGTGATTGCGTTCACCCGTGTTGCGGGCTCGTA
GGCGTCGCCGCCTTTATGTAACTTGAGCACTAATGGTGTCTTATACTCAT
ACTCGTACAGCACAGCACGTGTGTACGAGTAGCCTGCTACTGACTACTAC
TACTGTACAACAAACTGTCTAACTGTACATCCACTACTCGTACTACTACT
GTCAAGTATCAGACTGTGTTTTGCCTTGCACCCCTCTATCGCAACGTCCA
CCACCCTGTTTGATTGGTGCTCTCGCGTATTTATTACGCTGCAGTGCTAT
CTGTCTCGATACCACGTCCTGTTTATTTTGCATCAGGTACAGGTGCTGGT
ACAGAGTGGGGATCTTTTCAAATTAGGGGTAAATTAGTCAACAGCAGTAG
TAGTTACAGTAGTTAGCTCTCTCTATCCTGTCGAGCCTGCGACTACCCAG
GGGAGCCAATTTTCTACCAGGTATTCTCTACCAGGTGTACCTTACAGTAC
CTGATACCCGATTTAGTCGGCATGACGGAAGTATCACAAACTGAAGTTGA
CGATTATGCCCTGGCTCCCGAACCAGTTTAGAACGTCACGGCTGTGTGCA
CTAGAGCTGTATTTGTAGTTTATCGTTCAGCGCATGCAAGTACTACTACT
GTAGTTTGAAAATCGAAAATTAAACTCTGAAATCTGTGACTGAATGAAGT
TATGCTATCATATGATATGTAACACATGTACAGTCTTCAGCACGTTATGG
TCTCTGAAGTGACACGGTTATTGCTAGCACTACGGTCGAGGTCTATGATA
CTTTAATCGTTAAGGCAGCCGTGGAGTACTACTTTAAAAGAGTCTAGCGG
TATAAGCTCTTGACCTGAAGCTGATAAGCCGCCGCAGCTACGAAAATCCT
CAATAGTGCGGCTGGAGCACCTAATGTATCGATACATCGTATACAGCACC
ACCGGGTAAAGGAATACTGCTGTATGTTACGAGTACTCTGTACTCCCATA
GTGTCGGGCGAAACATGCGCTGTACGTTGTTATCTTGTAGAACTCCGGAA
TACAGTACAGTAATTTATATTTTTCGTCTCCCCGTCGTCAAAAACTAAAT
AATAACTTGATTATAGTTTTTTTTTTTTTTTCGTCCCATTTATTTTCTTC
GCCCTAGTCTTACTCTAGCTCCATCTCTCTTCGTAACTTAGGTCCGGGGT
CACATAGTAGGCGCTCCTCCCTCCTTCCCACTACGGTACGTGCCTACATT
TTTATCGCGAGAAGAGTGCAGCACTTTCTTCCCTCGTCGACTTTCATCGA
ATTGTGCTTACTCACGCTCTTCTTGCGTTTTCCGCGACGGAAAATGACAC
AGAAAAGTGCCACCGGGGATCGAACCCCCAACTTCCGCCAACAGAGGAAA
TACCCTAGCCATTAGACCACTGGGCCACCCCTGCTTATAGTGTGTTTATT
TAAAAAAAAATTGTTAACGGATGGTGTAAAAAATACAAAATACGGCTGTA
CATGCGGCAGTATTCATGCGGGCAGTTCTTGATCAGTTTTTAATTTTTAA
TGCGATGTATTTAAAACAAATATCATAATAATATCATAATATCATACTTC
GTACTACACTAGTAGTTGTGTCGTACTGTAGAGCTGTGGTGTTGTGAATT
GGACCAGTTCATTAGAAATTTAATTCTCACTGTAAAATTTAACTGTTATT
TTTCCTTACGAAGACATCATAAATTATACTTGTACTACAGTAGTAATTGG
CGGAGACTGTTTTTTTTGCTGGTTTCTTGTAACTTCCGTTTTCATATGGA
AAACGGTTTCACCGTAAAAAACGCTTCGAGTACAGTAGTAGTCACTATAA
ACCCGCCGCTAACGGCGAACTACGATGATCAGCAGTGTGCCGTGCGTGGT
AGAAAAGTCTCGTCGTAGAGGTCGATCATGGTGGACCCCTCGAGCGAGTC
ACCTGCCCAATGAATCATGTGGCGCCCCTGGGTCGGGAGAACAAGAAAGT
GGCGGGTTGAGCAGTAGCGCCGACGCCAAGGGCGATGCTAATTCTGATTG
CGAGAAAGTGGAGCCTACTTCCTACAATGGTTGAAGTTGTTTGAGGGATC
TTTAGGATGTTCGTTTTATTATACTATTAATAGTATACGAACGTGGGCCG
TTCAACAGTTTGGAATATTTTCTAAAATAGAACTAACCCTAACCCTATCC
TGACGACTACACCATACTAAAACCAAGTAAAAAAAATAATAGAGCCAATC
CCCTAACACGTGGTAAAGTCTACTGAGCAGGTGGCTGCACCGCTAGTTTT
TCTGGAGTTCGTGCTAATGGCGGCCGTAGCCGACGTAGTACGTAATGAGC
AACAAAAGTCGAGGCCTGACGACGCATCCCCTGCGATGTACAAGCACTTT
AATGTCTACGTGAAAGATTTGCTGAACAAGTAGATTCTTGCGTGGCAGTT
GTTTGACTGTGGAAAACCGACCACATGTCTACATTACCCCAAGAGTTTTT
TTTGGTCGTATGCGGTTTGATTATTGTCATGTATTGGTCCGATTCTGAAC
GGAAATAAAGTCAATATGTACCAATAGTTTTGTCTCTCTGCGGTCGCCTC
CAGCGAACCCCCCTCACAAACAGGGGGGGCGCTGATTGGCTCGCTTCGCC
AGTTCGCAGCTCACTGCTCCAGGGATTTTGAGGCGTTTTTGTTGTACAGT
ACCACCAGGTAGGCTTAGATATACTAAAAAATTTTGTCTTGCCCGCTCCT
TTTCCCCAAGGGTATAAGGAGCCGATAAGACGCACATAACGGTAAGTAGG
CACATAAAAAGGCTAATAAATAGTAATTCTACGCCAGAGAGCCGACACTC
TCGTGCCTCGCATGTCGCGCTACACCAAGCAGCCGGTTTGGCTCTGCATA
GAAGCATGCTGGCTGCAAAACCTAAGCAGTTACGATACTATTTTCAACTG
TCCTTACATTGTCATCGATAGCTTATGATCATAGTCTGTCCCAAGGTCGT
AGGGCAGGCTCAACGTTTTGGAATGAAACGCTTGACGGGGTTTAATCATA
CGATGTGCACCATCAGCTGCTCATTATTATACGCGGCCACAGGGCTTTCG
TGCACAGCTATCATACTCTGCGAGGGGTGTCGGTACACTTGGATCTTTGC
TGACGTCCTCCTTCGTGTCTGTCCGTTGAACGGTTGAGCTTTATTTCGGG
CAGAGCCTGTGTCTTTTGTTCGATTGTTGTGATTGCAGGATGGTAGGGGC
TTGGTTTGGCGTTCCTAGAGAGAGGCGGCCTTCAGGAAGACGTGATGGAG
TGTTGCAGATTAGAAACATGGCGATAACTGTTCGTCCGCAAGGGGCGGGA
AACCTGTAACCTGAAACCCGTCATACTCCTTTTTTTTGCTTTTGTCACGC
TCGTGTTGAGTGAGCGCGTTGGGGTATATAGTGCGGGGCACCTATCAATA
ATAATAAACATATTGAAAATTAACCCGGGCTGAGGTTTAACGCAGAATAG
GAAATCCCGACATGGATATGCTGAAGTTGGTGTAGGCGTAAAATATTTCC
TTACCCAATGATGTAACAAACCAGTCTGGGTCGAGATTGTGTCTTGTATT
GTGCCGTATGTGATAATGAATGCTGCCGTACGGCGCCTATAAATGCGAAA
GTACTGACTGCTGTTGTCGTTGCACTCGAACGTGACAACAATAACAAAAA
AATCACCTACCTCGTATCGTATTGCAGAAGGCGGGTTGGTCGTACGTACG
TAATCGTGTGATTGTGCGTACTGTCGAACTATCATATCGGGCAGGACATG
CTTCCGAGCAGCGTAAGCGGGAGATACGCTCCATATCGACATGGCTACAC
TGACTCGGTATCGGTGTCGTGGAACCTTCCGGACTACTTGAGACGGATGT
TCGACTACCATCAGGTGAGTTCATACACACACGCGCATTGCAAGATTTAT
TCACCGTTACAAGAGTGCAGTCGGTAGTAGCACCTGCATGCTTGGAAACA
GGAAATGTTGAAACGTGAGATACGAGTATAAAACCGGTGTAATACTGGTA
TATACCGTAAAAGCCACGGCAAGCAAAAAAAGCAAAAACGTAAAAATGAC
CCGCGCCCCCCTTCCTCTCCCGCCCTTTGCGCCGCGCCGATGCCAACGGT
CGTACGCCGATGCGGTACGATAATGTCTCTGCTGCTGCTGCTGCTGCTTC
TGCTGCTGGCGCCAAACAACTTGCGATGGGCACTTCTGTGCTGTTGTTGC
AAGATGGATTTAGAGGCGACGGCGGACCAGATGGTAACTCTTCTCACCGT
CAATCCTCAGAGGGTGTAAGTGCCTGCAGTTCGCACCCGTCAATATCTTT
CAGGCTTTCCGTTTGTGCAATCATCTGCCGATTAGATTGTGGATAGATTG
TGCTTAGGTTATTCCACTGCTATTGCTGTCATACGCGGCCGTACCTAAAT
ATAAATATCACGCGTTCGAAGCGGGTCTATGATACAAGCGTATGTCTGAG
TTTTACGCTACGAAGACTGACTGTGGTGAGTAGTTGATGTTGAACGCTCG
CTACACCCGCAGTGTGTCTGCAATTGAGCAACCCTTCACGTGAGTGATAA
AATTGTTAGCCGCGCGCGTACAATGATCCGTGGCGACCGTGTTAGTCGCA
GGCTTTTCCGTTCGTTGTAGGCCCGTGGTTCGTGCATGTCGTAGCTTGAA
TTTGTGCTCTCCGTTTTGATGTGGCATCGTGTGATTGAGGATGGTGTCGG
GTTTTGTTGCATCTTTGAATTAATGGTCATTCCCTACGCCCGCCCCCTTG
TTTCTTCGCTTGTGTGATGTGTATTCTTGTTTTTGTCATGACGCATCCGG
GAGCAGGTACAAGACGGCCTACTATCGGAAACGTGAGTGAGGCAGTTCCT
ACAGTGTTTGTCTGCAGCTATTACAGAAGATTGCGATGTGCTTGCCCGAG
CGCAACCTTCTTTTGTCGTATTGAAGTAATGCTGTGGGTTTTGTTTCGAA
GGTTTGGTGTGTCGTAGTGCCGTTGCGGCGATACACCGGGGTACTTGTAT
GTTGTGTTATTGTGATGCTATTGAGATGCCGCTCCGCGAGGAGAAGGTTT
CGAGTATTAGTTACTACACTATAATAGTATTGCCTCTATGAATGCGGTGC
ATTATTTTCTTAAATTCGGCGAGAGCTTTAGCCGCCGGTGTGTGGTTGGT
GTCACTGCTTCTTTTTTTTTTTTTTTTCGTCCCATTTATTATCCTCGCCC
GATTCTATCTCTAGCTCCATCTCTCTTCGTTATTCAGATCCTGGGTCACA
TAGCAGACGCTCCTCCTGCCTTCCCACTACGGTACGTGCCTACATTTTTG
TCGCGAGAAGAGTGCAGCACTTTCTTCCCTCGTCGACTTTCATCGAATTG
TGCTTACTCCCGCTCTCGCGTTTTCCGCAGCGGAAGATGGCACAGAAAAG
TGCCACCGGGGATTGAACCCCCAACCTCCGCCAACAGAGGCGAACACCCT
GACCACTAGACCACTGCGCCACCCCCCCTGCTTGATGTTGCTTGAAGTTT
ACCGCGAAGGAAGTTCCTACCGATGTCCGAATTCTGTTCATACGATGTAA
CCATGCATTTGACATGTTTCTGCGCTACTTCGTTTCCAAACGCTTGCCGA
AATCCCGCCGTACCATGTTTTACCCAAAATCCAACCCTCCCGATATGATG
TTTGAGTTGTCTTTTCCTTGAACCGGAGCACCTCGAAGCGCTAACTTTCC
CCTTCCCTTCTTCCGAAACCAAAACTTGACGGTTGGCTTTTTGAAACGGG
CATCGCAGAAACAAAGAATCACTGGGCAAGAGACGATCCAGGGTTTGCAG
TACTACAGGCATTTTTTCTAGTGGTGAGTGCCGGTTGGAAATGGCCTTGG
CTGTCGGCAGTGCAGCGCTTAGCTGCACGCAAAGTATCGAGGGGTATGAT
ATGTCGGTGATGAGTGTCGGTAGTCAGTGTTTCCGCAGGGTATGCACATG
TAACCTCTCGCCTGTCGCGGCCGGCCGACGGATATTTGCACACCCCGGAC
GAATACGAAAGTATTGACGAATAGTCGCATCCGTGGTGCCCCCTCGAATA
GCTTTTTTTTCGTGGGCCGATGAATATCCCTACGTGATTTCTAATGTCGC
AATGATTCACCCGTCGCAGGGACGAAAATATTCGTCGCAGAGGTGGCGCA
ATGGTCTAGTGGTTAGAGTGTTGCCTCTGTTGGCGGAAGTTGGGGGTTCG
ATTCCCGGTGGCACTTTTCTGTGCCATCTTCCGTCGCGGAAAACGCGAGA
GCGTGAGTAAGCACAATTCGATGAAAAGTCGACGAGGGAAGAAAGTGCTG
CACTCTTCTCGCGACAAAAATGTAGGCACGTACCGTAGTGGGAAGGAGGG
AGGAGCGCCTACTATGTGACCCCGGATCTGAGTTACGAAGAGAGATGGAG
CTAGAGAAAGAATAGAGCGAAGATAATAAATGGGACGGAAAAAAAAAAAA
AAAAAAAATGTAGTCGAGAAAGTATAGAAAGAAATATGAGGAAACCAAAA
ATATGTTATGTCCATGGAGAACCCCTCCGCCCCCAGTTAATTTGTACAGC
ACTGTGTGGTACACTAAACAACAAAACCAAACCAACGAACGCCGCGGGCC
GCTACTGCACATCACCTTAAACACCATCCCAACACCACCATACACCTGTA
TTCGAATATCTGGTATAAAACCGTTGCTGGGCGTTGGGGTGCGATGATGA
TGGCCTCGTGTGGCGCCGTGTGTGAGACGTGTCTCGTGAGCGACACGAGA
CAGACGATCCGTCCTTGCTGATTTTTGATTGGTGTATACTCGTATATCTT
TGGTAGCTAGTAATACACCAAGGAAAATCTAGATTAGAAAGGCCGCAGGA
CTGCATAGCACCATCCTAGCACCGCTATCCGCATGCAGTCGCACACGTAA
TGCCGTTGTTTGACGTAGAGAGGGGCGATGGTGTTGGTCGCTCAAGGGGA
TCCGACGAAAAAGAGAAAACGACACCTCACTCCTAGAAAGGTCAAAATGA
AACACAAATCGGAGCGTTGGGATTTGTGTACGAATCAAGTTTTTTTTTTT
TTAGTTTTGCTTTACTTGATTTTGTATGATTTTGGCCCTCCATGGTTGAG
TGGGTGGGTGGGTAGTGTCAGAGAATCGGATTTACGAATACCCTTGGTTG
GCCTATAGGCTATATATATATAGTCTAGTGCACACCATGCTGGGGCGTAA
ATGACCCTCAAAGTTATCCTACAGAGCCTGGGACGACCCAGGGGAGTCAC
GGCGTTATACCTTACCTGAGGACCGATAGATTCCGCGCGACCGATGTATC
ACACAGTGAGGTTGACGATTACCCCCTGGTCCCCGAACCAGTTTGGAACG
TCACGGCTGATGTATTTTTAAGTAAAACTAGTAATATGTGCGAACCAGAC
AGTCTGAACTGACGTATGAATATCATGGTCTTCTTCGTACCACCAATTTT
TTACTGATTGGCTGATTTGCAGGCCATCCGTATCAACAAATTGCTTCGAC
ATGATTCGCTGAAAACTTACTGTTTCACCCATTGTGGCAACCGAGCCCCA
AATTTTCGGAACGTAAAAAAGTAGGCAATCATAAACGACAGCCACTTTTT
GTTTTTTCAACCTTTCCTATACTCTAAGCCAATCGGTGCCCTGTGTTTTT
GTGATTACGTTTCATGATTTCGATGCCCTGTTTGTTTTGAAAGACAGGCC
GTTAGTAGTTGTCCAGGGTGTGGAAATTAATTTTGTCCCAGTGTATTACG
AGCGATGCGACTGCGAAAAGGCGCGGTCAGCAATGTCTTACTTCATAAAT
TCAATTCCCCTTGGCGACGTCCCTCCCGAGTGTCATTGTTGGCGGAATGA
CAAAATGAAGCAAGATTGTGAATCGGCAATATTACAAGTTACAAGGGGAA
AAGGCTTTAAAAAAGAAAAAAGAGCAGGTAAAAAAGCTTAAAAAACTAAA
AAAATGAGAACCTTCAAAATGCTTAAAAAAAGAAAAAGCGTTATTTTTAC
CCGTCCGCCGGAGGATAACAATGGTTGAAAAAAAATGGAGTTGTGGCAAT
TGAAATGACCGTTTCCATTAAGCGCCCCCATGGCTGCTGTGTATGTCGTG
TGTGTGTGCGCGCGTTGAAGGTGGCGACGTGCGCATTTGGGGTGGCGTTT
GGTGCAAGGGGCATCTGGACGTACGTAGGATTGCTGCTGCACTCGTTGGG
GGTACACTGGGTGCTGTGCGGGGTGGTCATGGCGTCCTTGTGCAGGTGAC
GTGGCGTCCGCTTTCAGTTGTCCGTAGCTCTTATATTTTTGTGAAATCGT
GCACGAGGTGATATGAAAGCTGTGTACTTTAGTCAGGAGGTGACGGGAGA
GGAACTCTGCGAAGAAGAGGTCGGCGATCGACTCGGCGGCCGCAGGCTAC
CTTTGAAAAAAAGAAATCGAGCTTAAAAAACTAGAGTCTTAGAAAACGCT
GAACCGTGGGAATCAGGTGGAGCTGAAGCTTTATTTTTACCGATCCGCCG
AAGGATGATAATGGTTGATAACAATGGTTGAAAGAAACAACCTAACTGTA
GCTTTATATGTGCTGGCATAGAACTCTATCACGAGGGCCCCTCATAAATA
GGCCCAAAACACTTATTTTGACGTGTAAATCGCGAGACAAACGCCGCATG
AATCACGGATCTCGTTCGTTTTGTATGATGCGGTGCGGCAGTAGACTTAT
CAATGATGATACTTTTTCATTCTTCGGGGGTGGGGGTCGGGGGTAAGGAC
ACTTGCGCTCGCCCTTTGTCGCCTTGTTTTGGGCCTATTTGTTACAATGG
TTGATAGGGGCCTCTGTAATAGTATGATGGGCGTGTCACGTGCATACGCT
TGCCAGATGCCGCTGTTGTGGCAACGATCACACGAGTGTTGCGAACTGTC
GGCGCTGCCGTGTCTCAAAACGTTGTCAAAGCAGTTAGTTAGGTGCCCGC
GCATATTGCGGTCTTGCGTCGTTGTCGCGAAATAACGCAATTGATCAAAG
CCACGATCGCAAGAGGATCAGGAGCAATAGACAGTACTATAGTGGGGGCG
CACCCGGGGCCGAGCACGCGCACCGAAAGAGACTTGTATGCTCTCCGCTG
TCGCAGTTGTCAATCGTGTAAGGATAACATGAGGCACGTGGGACGCGTTA
GCGACACCATTGTGGATATACGAAGTATGATGATGTTGGGCCACGCGTGG
TTTGGCTGCCTTTTGTGGGTGATGTGGGGATATCTGCTGTTGTACGTGGA
GCGCTATCTGAGCCCGCGGGCCGGGAGAGACCGAACATGACGAAGCCGAA
CATAGATAACGTTTGTGTTTTCGTTGATAACTTCGGCGAGGAGAGGCGTG
CTGCGCTGATATCACCCTCCGGCCGCTGCGCTGTTCGCTGGTTCCTTGCG
CAGATGGATAGCGAATAGTCGCTTGCTGCAGCACCGATCGCATTCGGTGG
AGCAAGAGGTCGAGTGGATGTACGCGTCGGACATACACTGCAACTCGTTC
TTTCCGCTCTTCGTGTTGCTGTACGTCCTACAGGTACTGTTGTGCTTCCT
CTCCGTTGTTTCTCGAGTGTTTTTGGTGTCCGTATTGTATGCGTTTCCTA
AATTCGCTGCCGTAGAACACGGCCAGTGACGTATCATATTTTGTTTCGTT
TGGAGTTGGATGGTTAAGAAGCCCGTTGAAATGGTTTGTCGCTACTATTA
GTAGGCCGACGTGTGAGCAGATGATGCAAGTGAAGTGGGTGCTTGCCCTC
AGACCCTTTTCCTCAGGCCTAGTGGAGATATCCTTATGCGGTGCATTGTC
GAGTCAATAATCGTGTTCCACGTGTTTTGCGTTGGTGTTCTGCACCGGGT
CTCGTGACGTTTGGGTATATCCCACCCCTCTGCATGTTTTGAGAAGGCGA
TGAAGTTTGCCCCCAACTTGGCACATGAACGCAATATGTGGCCAATACAA
TCCATTTGGTACCGATTTTAGCCGTATGGCATATATTCGTTGTTGTCGTA
AACGACGTAGCTGCTTCCCTCGCTGCCCTCCTGTTGACGCTACTCGTGCT
GGCCTTTTTTTTTTTTTTTTTTTTTTCTCGGGACGCCTTTTTTCTCCCTC
ACCCAAGTAGACCTCACGTTGCGCTATCTATCTACAATGGCGTTCATCCT
TGGTCGGCTATGCTTCGCAAAACATTGCAGGTCGTGGGTGCTGTTAGCCT
AGCCTGGCACGGTAAAAAAAGAAAACTCCATCCCTCTCCTAGACGTTCGG
GGCTAATTTTTGGTGTAGTAGTGTCCCGTTCTCGCCGTGAAGGTCGACGA
GGGGAGAAATTGCTGCACCCTTCTCGTGATAAAAATATAGGCAAGTACCG
TAGTGGGGAGGGGCGGGGGTGCCTGCTATGCGACCTCGGATCTGAGTTGC
GTGTTGGTATTGTCGAAGATATTTGTTCCATGAACGACGGACGAGTCAGT
GATGCTCTCACTCTGCTGCAAGTCACGTCTCACAAGAAGATGCCTTTTAT
CGCTGTTGCATTATTAACTTGATCTACTGCTACTGGTTGCTTCCTCTTGA
TTGGCAAGGCTCGATGTACATTAGGAGTGAGCGGGTTGGGGCTCTTCCAT
CCATTAGTATCCCTCTCGCGACCGTCTTCTAGACTCGACTTACGAGGATT
CTCTTCCAGAACAACGAGCTTCTGGACATATCACAAGTTCCGGTTCGCAT
GAAACGGTTACACAGATAGTATTTAACTACTACCTGGTACTCTGCACTAT
GTCCTGTACCCCTATGTACTCATATGTACTACTACAGTACTGTTATGTGC
AGCTCCATCATAAGAACACTTGCAAAGCACACACTGTAACATTATGAAAA
GAGATTGTGCTGGAGAAAAAATAGGGCGAAGATAATAAATGGGACGGAAA
AAAAAAAAAAAAATGGTGCCCGTCCTCGCTGTATGTAGCGGTTAATCGTT
GGCTTGGAGAATACAGCTGCTATACGTAACGCACGGGGAAGCGCGTGGGG
GATGTGCGGCATGGTATACTTAGAAATCTCGGTGAGAGAGCCACGTTGCT
CTCCAACCAGGGGAGGTCTACCTATGGCCTATTCCCGTTAGGGTATTTTC
TTGATGCGCGGCATTGTTGCAACTCACTGGAGCAAAACGCTTAAAAGGCC
CCACTCCACACACTCTACACAGGAAGCTGGTTGCTTGCTGGGGAGCCAGC
CACCTTATCAACCATCGTTGTTTTTGTAGGCGGGATCTTCCAGGATGTTC
GTTTTATTAGATGTATGATGTATGATTAGTAGCAACGTGGGCTGTTCAGC
AGTTCGGTATATTATATCAAGAACCTTTATAACCCGAAGCCTAACGAACA
TACATTATTTATCATAGAGTCAAACTTCAATAAAGATTCGTCATAGATAA
AAACGCTAAACCTACTGTAGCTGGGTCTATTCGAGGGTGCGCGCGACGAT
AGTCGAAATCCGCGTGGGTCCTTCGGGTATGCGATAGTATACGGGCAGTA
GTTGGTTTTGGGGGCAACCGGGCGGGCGTAAACGGGCTGCCCAAGTAGGA
CGTAGGACTACTGTAAACTTGTTTAGAGAGATGTGTATTTTTTATTATAC
TTAATAGTATAGAGACGTTGGTTACAGGAAATGCTAGAGTTTTTGTATAA
ATATCCCTAACCCTAACCAAAATGACCCCTATACTAACAGTGAGTAATGA
CCTTGTAAGAAATTGCTCTCCAAAGAGGGCTATAATATGTACTGCCAATT
GACCATCATAGCAAGTCAGTTTGGCGGAGCAACGCAAGGATGATGGCTGC
TGTAGTAACTGATTCAGCATGCTTGTGAAACGGGACCTACGCCTGCTAGA
GCCAGGAAGCTCCCTCTTCCTCAGATGCGCTACATGTCGCTGGTCGAGTG
ATGTCTTGGACGTCTACAAGTATGATACATGGCATATGCTATCATGATCA
CACACCCGTACACCCTTGCTTCTCCTCCACCTGTCTCAATCACACATTTT
GTTGTTTGCAGCTGCTGTTGCTGCCGTTACTCCTGGGGCGGTCGCTGTGG
GCCCTGGTGTTGTCGAACACCCTTTATGCGTTGGCTTTCTCGGTGTATTT
TTACGTCACGCACCTGGGGTATCGATGTGAGTAACATGTATGGGAGCGTT
TTTTCCGTGTTTTTTGTAGCTAAGCGTCGTATCTTGGTACCAACGGGAGA
TAGAAGTGAACCGTGCTGTAATGTTATGGTGCCATTAACTGTTCAATAAC
TGTGTCACTTGCAGGGGTGTGTCCCATATTTCCTTTCGTGGCTGTGGTTT
TACCGTGGTTGTACACGACCGCGATTGAGTGATCTGGTCTTTGAAGCACC
GATGTTGGTGGGGACGTCTTATTGTTGGGTGCCGTTGGCGACCCACAAAG
GAGCCGCCTTATCAACCATTGTTGTTTTTTGTAGGCCGGATCTTTAGGAT
GTTCGTTATATTAGATGTATGATGTATGATTAGTCACAACGTGGGCTGTT
CAGCAGCTCGGAAAATTCTCTCAACCCTAGCCAACACACCGTAATAATAG
TCTTACACCTCTCTAATGAAGATCCTTGCTACAAAAACGATAAGCCTACT
GCCCACAAGCGCCACATGCAAACATACATACGAAGTAATATATACTTCAG
TATATGTGACCAATCACCCCCCCCCGCCGTACCCCAAATTTCGTTTTGTT
TTGGCTGTCCCCTCTCTGCCGACCGAAGCGCTGCCGTTCTTGCACAAGAC
CGAGGTGTTCCTCTATCCAGTAGTGGGTGTCATAATGTTGCTTCTTCTGT
CCATCGTCTTGCTGCCGTTCGGCGTCAAGGTCAACGCTACCCTCGCAATG
GCAAAACTGTATTTTGTCGATTAATGACGTGCCGCGTGGGTGTTGGGTTA
CGAGGACTACGATAGCGCAAGCTGAAGATGCAGCGCGATCGACCAAGCTA
AGGGTGGAGCTGTAGATGTCGAGGGTTACATTTTCACACCCCGTACGCGT
GATACCGGGGGCCATGTCGTAGTGCTACTACTGTACTTCGAAATATGTAG
TCCTGTATGGCGTATCACAGACGTACGGCGTGTTATCCTTGTTCGAAGGT
TAGCTAACGACGTGCCCAATTTCAGTGCATTTCGCACACAATGCCGGGTT
GCGTATAGATCAGAGAGGCGGGG
back to top

Coding sequence (CDS) from alignment at D-herbacea_M_contig93:236128..250000-

>mRNA_D-herbacea_M_contig93.15892.1 ID=mRNA_D-herbacea_M_contig93.15892.1|Name=mRNA_D-herbacea_M_contig93.15892.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1572bp|location=Sequence derived from alignment at D-herbacea_M_contig93:236128..250000- (Desmarestia herbacea DmunM male)
ATGCTTCCGAGCAGCGTAAGCGGGAGATACGCTCCATATCGACATGGCTA
CACTGACTCGGTATCGGTGTCGTGGAACCTTCCGGACTACTTGAGACGGA
TGTTCGACTACCATCAGATGCTTCCGAGCAGCGTAAGCGGGAGATACGCT
CCATATCGACATGGCTACACTGACTCGGTATCGGTGTCGTGGAACCTTCC
GGACTACTTGAGACGGATGTTCGACTACCATCAGATGGATTTAGAGGCGA
CGGCGGACCAGATGGTAACTCTTCTCACCGTCAATCCTCAGAGGGTATGG
ATTTAGAGGCGACGGCGGACCAGATGGTAACTCTTCTCACCGTCAATCCT
CAGAGGGTGTACAAGACGGCCTACTATCGGAAACGTACAAGACGGCCTAC
TATCGGAAACAAACAAAGAATCACTGGGCAAGAGACGATCCAGGGTTTGC
AGTACTACAGGCATTTTTTCTAGTGAAACAAAGAATCACTGGGCAAGAGA
CGATCCAGGGTTTGCAGTACTACAGGCATTTTTTCTAGTGGTGGCGACGT
GCGCATTTGGGGTGGCGTTTGGTGCAAGGGGCATCTGGACGTACGTAGGA
TTGCTGCTGCACTCGTTGGGGGTACACTGGGTGCTGTGCGGGGTGGTCAT
GGCGTCCTTGTGCAGGTGGCGACGTGCGCATTTGGGGTGGCGTTTGGTGC
AAGGGGCATCTGGACGTACGTAGGATTGCTGCTGCACTCGTTGGGGGTAC
ACTGGGTGCTGTGCGGGGTGGTCATGGCGTCCTTGTGCAGATGGATAGCG
AATAGTCGCTTGCTGCAGCACCGATCGCATTCGGTGGAGCAAGAGGTCGA
GTGGATGTACGCGTCGGACATACACTGCAACTCGTTCTTTCCGCTCTTCG
TGTTGCTGTACGTCCTACAGATGGATAGCGAATAGTCGCTTGCTGCAGCA
CCGATCGCATTCGGTGGAGCAAGAGGTCGAGTGGATGTACGCGTCGGACA
TACACTGCAACTCGTTCTTTCCGCTCTTCGTGTTGCTGTACGTCCTACAG
CTGCTGTTGCTGCCGTTACTCCTGGGGCGGTCGCTGTGGGCCCTGGTGTT
GTCGAACACCCTTTATGCGTTGGCTTTCTCGGTGTATTTTTACGTCACGC
ACCTGGGGTATCGATCTGCTGTTGCTGCCGTTACTCCTGGGGCGGTCGCT
GTGGGCCCTGGTGTTGTCGAACACCCTTTATGCGTTGGCTTTCTCGGTGT
ATTTTTACGTCACGCACCTGGGGTATCGATCGCTGCCGTTCTTGCACAAG
ACCGAGGTGTTCCTCTATCCAGTAGTGGGTGTCATAATGTTGCTTCTTCT
GTCCATCGTCTTGCTGCCGTTCGGCGTCAAGGTCAACGCTACCCTCGCAA
TGGCAAAACTGTATTTTGTCGATTAACGCTGCCGTTCTTGCACAAGACCG
AGGTGTTCCTCTATCCAGTAGTGGGTGTCATAATGTTGCTTCTTCTGTCC
ATCGTCTTGCTGCCGTTCGGCGTCAAGGTCAACGCTACCCTCGCAATGGC
AAAACTGTATTTTGTCGATTAA
back to top