mRNA_D-herbacea_M_contig92.15864.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig92.15864.1
Unique NamemRNA_D-herbacea_M_contig92.15864.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig92.15864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig92contigD-herbacea_M_contig92:809262..809567 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons1
Model size306
Cds size306
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935734.357603-CDS-D-herbacea_M_contig92:809261..8095671622935734.357603-CDS-D-herbacea_M_contig92:809261..809567Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig92 809262..809567 +
1690880679.9634693-CDS-D-herbacea_M_contig92:809261..8095671690880679.9634693-CDS-D-herbacea_M_contig92:809261..809567Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig92 809262..809567 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig92.15864.1prot_D-herbacea_M_contig92.15864.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig92 809262..809567 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig92.15864.1

>prot_D-herbacea_M_contig92.15864.1 ID=prot_D-herbacea_M_contig92.15864.1|Name=mRNA_D-herbacea_M_contig92.15864.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=102bp
SCFFFFAVFLIAVGLVLTGEDLPFFFFSFFSSESDVVVAPALGPFRKGLK
YVGRPRIPMLAFRAALATATISSSTNLSPASLTSSIALSLSLTPRTGTKT
AS
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mRNA from alignment at D-herbacea_M_contig92:809262..809567+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig92.15864.1 ID=mRNA_D-herbacea_M_contig92.15864.1|Name=mRNA_D-herbacea_M_contig92.15864.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=306bp|location=Sequence derived from alignment at D-herbacea_M_contig92:809262..809567+ (Desmarestia herbacea DmunM male)
TCATGCTTTTTTTTTTTTGCCGTCTTCCTCATCGCCGTAGGTCTCGTGCT
AACAGGCGAGGACCTACCGTTCTTCTTCTTCTCCTTCTTCTCGTCTGAAT
CTGACGTAGTAGTCGCCCCTGCCCTCGGTCCCTTTCGCAAAGGGCTCAAG
TACGTAGGCCGACCTAGAATTCCCATGCTGGCTTTCAGAGCAGCTTTAGC
CACCGCGACGATCTCTTCGTCGACCAACCTCTCACCCGCCAGCCTGACCT
CCTCTATCGCCCTGAGCTTAAGTCTCACACCGAGAACGGGAACCAAGACG
GCCTCC
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Coding sequence (CDS) from alignment at D-herbacea_M_contig92:809262..809567+

>mRNA_D-herbacea_M_contig92.15864.1 ID=mRNA_D-herbacea_M_contig92.15864.1|Name=mRNA_D-herbacea_M_contig92.15864.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=612bp|location=Sequence derived from alignment at D-herbacea_M_contig92:809262..809567+ (Desmarestia herbacea DmunM male)
TCATGCTTTTTTTTTTTTGCCGTCTTCCTCATCGCCGTAGGTCTCGTGCT
AACAGGCGAGGACCTACCGTTCTTCTTCTTCTCCTTCTTCTCGTCTGAAT
CTGACGTAGTAGTCGCCCCTGCCCTCGGTCCCTTTCGCAAAGGGCTCAAG
TACGTAGGCCGACCTAGAATTCCCATGCTGGCTTTCAGAGCAGCTTTAGC
CACCGCGACGATCTCTTCGTCGACCAACCTCTCACCCGCCAGCCTGACCT
CCTCTATCGCCCTGAGCTTAAGTCTCACACCGAGAACGGGAACCAAGACG
GCCTCCTCATGCTTTTTTTTTTTTGCCGTCTTCCTCATCGCCGTAGGTCT
CGTGCTAACAGGCGAGGACCTACCGTTCTTCTTCTTCTCCTTCTTCTCGT
CTGAATCTGACGTAGTAGTCGCCCCTGCCCTCGGTCCCTTTCGCAAAGGG
CTCAAGTACGTAGGCCGACCTAGAATTCCCATGCTGGCTTTCAGAGCAGC
TTTAGCCACCGCGACGATCTCTTCGTCGACCAACCTCTCACCCGCCAGCC
TGACCTCCTCTATCGCCCTGAGCTTAAGTCTCACACCGAGAACGGGAACC
AAGACGGCCTCC
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