mRNA_D-herbacea_M_contig92.15854.1 (mRNA) Desmarestia herbacea DmunM male
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Overview
Homology
BLAST of mRNA_D-herbacea_M_contig92.15854.1 vs. uniprot
Match: D8LJT6_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT6_ECTSI) HSP 1 Score: 239 bits (610), Expect = 8.660e-71 Identity = 122/132 (92.42%), Postives = 128/132 (96.97%), Query Frame = 1
Query: 421 VPALEDKRTKRGFSKRVSLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAMGSDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLLRS 816
+P LEDKR KRGFSKRV+LRDLERYFEYPIEEVS+MMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTA G DRQRLQ+QLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDA+TLLR+
Sbjct: 90 IPGLEDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETLLRT 221
BLAST of mRNA_D-herbacea_M_contig92.15854.1 vs. uniprot
Match: A0A6H5K0H9_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H9_9PHAE) HSP 1 Score: 238 bits (607), Expect = 2.400e-69 Identity = 121/132 (91.67%), Postives = 128/132 (96.97%), Query Frame = 1
Query: 421 VPALEDKRTKRGFSKRVSLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAMGSDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLLRS 816
+P LEDKR KRGFSKRV+LRDLERYFEYPIE+VS+MMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTA G DRQRLQ+QLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDA+TLLR+
Sbjct: 92 IPGLEDKRAKRGFSKRVTLRDLERYFEYPIEDVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETLLRT 223
BLAST of mRNA_D-herbacea_M_contig92.15854.1 vs. uniprot
Match: A0A836CMG7_9STRA (RWP-RK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG7_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 2.670e-17 Identity = 49/138 (35.51%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 406 GYDEDVPALEDKRTKRGFSKRVSLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSI-KYVELLARTAMGSDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLLRS 816
G D D ++ ++ R +R++L LE + P+ +R +GVS T++K+LCR+YGI+RWP+RQIRS+ K + K+++ A+ D +++ L K+ ++ + A+ G +A +R +I RP ELDAD L S
Sbjct: 79 GDDVDEHGVKIRQNSREVGQRITLSVLEACYGEPLTAAARRLGVSNTMLKKLCRRYGIQRWPHRQIRSIEKEVQKHMQARAQATSAVDIAACDERIALLQKKRAIVVKTASCGLNASLRSAIFMARPGELDADQLFSS 216
BLAST of mRNA_D-herbacea_M_contig92.15854.1 vs. uniprot
Match: A0A835Z1M5_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M5_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 7.140e-16 Identity = 42/115 (36.52%), Postives = 76/115 (66.09%), Query Frame = 1
Query: 469 VSLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYV-ELLARTAMGSDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLL 810
++L L+ ++ P+ E+++ +G+S T++K++CRKYGI+RWP+RQIRS+NKS + + E + +R LQ QL L KK+L+ + A++G + +R ++ PE+L+ D +
Sbjct: 14 ITLELLQSFYNVPLAELAKELGLSLTLLKKICRKYGIQRWPHRQIRSINKSAQELTERINGATSHEERAELQSQLHLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEDAVF 128
BLAST of mRNA_D-herbacea_M_contig92.15854.1 vs. uniprot
Match: A0A835YTG3_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG3_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.920e-14 Identity = 38/115 (33.04%), Postives = 80/115 (69.57%), Query Frame = 1
Query: 469 VSLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAMGSDRQ-RLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLL 810
++L L+ Y+ P+ E+++ +G+S T++K++CRK+GI+RWP+RQIRS+NK+ + ++ A+ A+ ++ ++ QL L KK+L+ + A++G + +R ++ PE+L+ +++
Sbjct: 11 ITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSLNKTAQELKERAQCALTAEEHAEIEAQLQLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEESVF 125
BLAST of mRNA_D-herbacea_M_contig92.15854.1 vs. uniprot
Match: A0A024FU44_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FU44_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 4.530e-14 Identity = 42/111 (37.84%), Postives = 73/111 (65.77%), Query Frame = 1
Query: 388 RVGDGVGYDEDVPALEDKRTKRGFSKRVSLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAMGSDRQRLQDQLVSLHYKKQLI 720
R GD G + E R+K +K++SL +L +F+ PI EV++ G+ T++K++CR+ GIKRWP+RQIRS+ KSI +E +A ++++R QDQ+++L +++ +
Sbjct: 82 RQGDIRGEQDTSVCTESGRSKNSLTKQISLDELRAHFDRPIIEVAKKFGICITLMKKICRRNGIKRWPHRQIRSLTKSIAALEAAMLSANETEQERYQDQIMNLRRRRESV 192
BLAST of mRNA_D-herbacea_M_contig92.15854.1 vs. uniprot
Match: G4ZYN2_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZYN2_PHYSP) HSP 1 Score: 83.2 bits (204), Expect = 5.000e-14 Identity = 44/120 (36.67%), Postives = 77/120 (64.17%), Query Frame = 1
Query: 433 EDKRTKRGFSKRVSLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAMGSDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKS---ILQMRP 783
E R K +K +S+ +L +F+ PI +V++ G+ T++K++CR+ GIKRWP+RQIRS++KSI +E +A GS+R++ +DQ+V+L K++ + +S + + S +L RP
Sbjct: 141 ESNRVKSLVTKHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGSEREKYRDQIVNLKMKRESVIADPNKDSSMRPKTSPPSLLTPRP 260
BLAST of mRNA_D-herbacea_M_contig92.15854.1 vs. uniprot
Match: A0A6G0XXF4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXF4_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 5.750e-14 Identity = 45/128 (35.16%), Postives = 76/128 (59.38%), Query Frame = 1
Query: 442 RTKRGFSKRVSLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAMGSDRQRLQDQLVSLHYKKQLICQAATTGASAKVRK-SILQMRPEELDADTLLRSNS 822
R K +K +S+ +L +F+ PI EV+R G+ T++K++CR+ GIKRWP+RQIRS+ KSI +E TA G++R++ + Q+ +L K+ + S + K + + ++LD L S+S
Sbjct: 145 RMKYHATKFISIEELREHFDQPIVEVARFFGICITLMKKVCRRNGIKRWPHRQIRSLTKSISSMEAAMMTATGAEREKYEGQIQTLKMKRDAVIADPNKEVSVSLSKCEFKEGKKDDLDETGSLSSDS 272
BLAST of mRNA_D-herbacea_M_contig92.15854.1 vs. uniprot
Match: D0NKH4_PHYIT (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0NKH4_PHYIT) HSP 1 Score: 82.8 bits (203), Expect = 5.960e-14 Identity = 39/96 (40.62%), Postives = 68/96 (70.83%), Query Frame = 1
Query: 433 EDKRTKRGFSKRVSLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAMGSDRQRLQDQLVSLHYKKQLI 720
E R K +K +S+ +L +F+ PI +V++ G+ T++K++CR+ GIKRWP+RQIRS++KSI +E +A GS+R++ +DQ+V+L K++ +
Sbjct: 128 ESNRVKSLVTKHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGSEREKYRDQIVNLKMKRESV 223
BLAST of mRNA_D-herbacea_M_contig92.15854.1 vs. uniprot
Match: A0A0P1AY22_PLAHL (SANT/Myb domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AY22_PLAHL) HSP 1 Score: 82.8 bits (203), Expect = 6.090e-14 Identity = 39/96 (40.62%), Postives = 67/96 (69.79%), Query Frame = 1
Query: 433 EDKRTKRGFSKRVSLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAMGSDRQRLQDQLVSLHYKKQLI 720
E R K +K +S+ +L +F+ PI +V++ G+ T++K++CR+ GIKRWP+RQIRS++KSI +E +A GS+R+R +DQ+ +L K++ +
Sbjct: 126 ESNRVKSLVTKHISIEELRTHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGSERERYRDQITNLKMKRECV 221 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig92.15854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_M_contig92.15854.1 >prot_D-herbacea_M_contig92.15854.1 ID=prot_D-herbacea_M_contig92.15854.1|Name=mRNA_D-herbacea_M_contig92.15854.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=233bp MSSAAISPGAPGPSEDEEAAMAMTATAVGVSDGGDVEDRVGDGVGYDEDVback to top mRNA from alignment at D-herbacea_M_contig92:666605..673753- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_M_contig92.15854.1 ID=mRNA_D-herbacea_M_contig92.15854.1|Name=mRNA_D-herbacea_M_contig92.15854.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=7149bp|location=Sequence derived from alignment at D-herbacea_M_contig92:666605..673753- (Desmarestia herbacea DmunM male)back to top Coding sequence (CDS) from alignment at D-herbacea_M_contig92:666605..673753- >mRNA_D-herbacea_M_contig92.15854.1 ID=mRNA_D-herbacea_M_contig92.15854.1|Name=mRNA_D-herbacea_M_contig92.15854.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1398bp|location=Sequence derived from alignment at D-herbacea_M_contig92:666605..673753- (Desmarestia herbacea DmunM male)back to top |