mRNA_D-herbacea_M_contig916.15833.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig916.15833.1
Unique NamemRNA_D-herbacea_M_contig916.15833.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
BLAST of mRNA_D-herbacea_M_contig916.15833.1 vs. uniprot
Match: A0A6H5JWE9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWE9_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 7.310e-33
Identity = 113/357 (31.65%), Postives = 170/357 (47.62%), Query Frame = 1
Query:  682 GGLQAEFVANVATLGGGPRSQALARSGLDDNMSRLRKCSVLGQGAFGNVYLAEHEEF-GDKYALKVTKPNATDAALASAVLEMMVLLRIQRKSHINLVSALAIDDTQVQLPILLPAADTDFFHVTMKGGWPLGAQLTLLLDAAKGVSHLHEELGVVHMDLKFGNILVYNSPYP--HAKVADFGHTREIGERCHGMLGTLGFVSLEVLTGSYV-ARPGLDVFSLATMLLMMCSK-DGRNGCIFVHPL-------------------ITTAEEKRMLDDLLPNRPPGCDFMAQ-------LMRRVFDDGTFAAKVLVPEMMYEVIRSPDVLCGHLRRFFTSAPSDTPDMASFMGVVQQL 1659
            G ++  F+AN+A +    + Q+ A + L      +     LG G+FG V    +    G  +A+K     A+ +A   A++EM V  R+ R  H N++ AL++DD    +PILLP A  D           LG +L L++D A+G+ HLH  +G+VH D+K GN+LV+ S     HAK+ADFG T EIGE C G +GT G ++ E ++   V   P  DV S+A +LLM+C K + R   +F  P+                   + TA+E   L+ LL     G D   +       + RR   DG+F A  L P+ +   + S + L G         P +  DM   +     L
Sbjct:  973 GSIRRLFLANLAEVYASDQVQSFAINALKTAHMPMVLAQPLGYGSFGRVDDVSYASLPGQSFAMKTVTQAASLSARFCALVEMTVFARLARTPHHNVLGALSMDDDSDLMPILLPKARCDLGSYINSDTHGLGEKLRLVVDLARGIQHLHS-MGLVHRDIKPGNVLVFESEEHGLHAKLADFGFTAEIGEMCPGGMGTSGAMAFETMSADPVLGAPAQDVVSVAVVLLMVCLKRERRCSNLFTQPVGAVQIENIDVNSPRTVPQELRTADETARLEVLLERARLGQDISHETKLLDFEMSRRTMADGSFMAW-LSPDKLDLTLESSEKLVGIFPSLLAVDPENREDMDFLVQFTSHL 1327          
BLAST of mRNA_D-herbacea_M_contig916.15833.1 vs. uniprot
Match: D7FYY1_ECTSI (Protein serine/threonine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY1_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 2.370e-28
Identity = 111/352 (31.53%), Postives = 168/352 (47.73%), Query Frame = 1
Query:  682 GGLQAEFVANV-----ATLGGGPRSQALARSGLDDN------MSRLRKCSVLGQGAFGNVYLAEHEEFGDKYALKVTKPNATDAALASAVLEMMVLLRIQRKSHINLVSALAIDDTQ--VQLPILLPAADTDFFHVTMKGGWPLGAQLTLLLDAAKGVSHLHEELGVVHMDLKFGNILVYNSPYPHA--KVADFGHTREIGERCHGMLGTLGFVSLEVLTGSYVARPGLDVFSLATMLLMMC-SKDGRNGCIFVHP-LITTAEEKRMLDDLLPNRPPGCDFMAQ-------LMRRVFDDGTFAAKVLVPEMMYEV--IRSPDVLCGHLRRFFTSAPSDTPDMASFMGVVQQL 1659
            G ++A F+ NV     AT+G G      AR  L  +       S L +  V+G+G+FG V  A H     ++A+K  K  A + A   A +EM+V+ R+ +  H N++ A+AIDD +  V +PILLP A  DF  V   G W +  +L+ L   A GV H+HE  G+ H DL   NIL+ +        K++DFG  R +GE    M+GTLG + LEV+          D F++  M   +C + D     +F+ P L T AE K      L  +  G   MA+       +M R      F + + V  +  ++   R   ++  +L  F  +  +D  DMASF  V+  +
Sbjct:  356 GEIRAAFIGNVRQRQAATVGEGCALVQAARVALGGSGGGIGASSSLHESGVIGEGSFGIVEGATHSFLPGEFAVKKLKEGADNNARYCARVEMIVMARLAKSPHPNVIGAIAIDDREAAVGMPILLPRAHGDFGQVLNDGDWSMTQKLSCLQQVASGVRHMHEA-GIGHGDLTPPNILLVDDGDGECVPKISDFGLARALGEMRPKMMGTLGSMPLEVMQAPVRTSESQDTFAMGVMAFTVCVTPDKVQANMFISPDLFTVAEAKAK--KALEAKGTGPFAMAERDLFERNMMERTMSTRAFESLLTVDNLHPDLGSARVRGMVSCYLSAFLATDLNDRGDMASFEKVMGDM 704          
BLAST of mRNA_D-herbacea_M_contig916.15833.1 vs. uniprot
Match: D7FL13_ECTSI (Membrane-associated tyrosine-and threonine-specific cdc2-inhibitory kinase (Myt1 kinase) n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL13_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 1.210e-17
Identity = 98/367 (26.70%), Postives = 145/367 (39.51%), Query Frame = 1
Query:  682 GGLQAEFVANVATLGGGPRSQALARSGLDDNMSRLRKCSVLGQGAFGNVYLAEHEEF-GDKYALKVTKPNATDAALASAVLEMMVLLRIQRKSHINLVSALAIDDTQVQLPILLPAADTDFFHVTMKGGWPLGAQLTLLLDAAKGVSHLHEELGVVHMDLKFGNILVYNSPYP--HAKVADFGHTREIGERCHGMLGTLGFVSLEVLTGSYV-ARPGLDVFSLATMLLMMCSKDGRN--------------------GCIFVHPLITTAEEKRMLDDLLPNRPPGCDFMAQ-------LMRRVFDDGTFAAKVLVPEMMYEVIRSPDVLCGHLRRFFTSAPSDTPDM---ASFMGVVQQLEADVRQP 1680
            G ++  F+AN+A +    + Q+ A + L      +     LG G+FG V    +    G  +A+K     A+ +A   A++EM V  R                                                 L++D A+G  H+H  +G+VH D+K GN+LV+ S     HAK+ADFG   EIGERC G +GT G ++ E ++   V   P  DV S+A +LLM+C K  R                      C+     + TA+E   L+ LL     G D   +       + RR   DG+F A  L P+     + S + L G L       P    DM     F   + +L     QP
Sbjct:  657 GSIRRLFLANLAEVCASGQVQSFAVNALKTADMPMVLAQPLGYGSFGRVDDVSYASLPGQSFAMKTVTQAASMSARFCALVEMTVFAR-------------------------------------------------LVVDLARGAHHMHS-MGLVHRDIKPGNVLVFESEEHGLHAKLADFGFAAEIGERCPGGMGTSGAMAFETMSADPVLGAPAQDVVSVAVVLLMVCLKRERRCSNLFTQQLGYFAARQRVHRTCVGTRQELRTADETARLEVLLERTRLGQDVSHETKLLEFEVSRRTMADGSFVAW-LSPDKFDLTLESSEKLVGVLPSLLAVDPESREDMDFLVQFTSHLAELNKGSEQP 972          
BLAST of mRNA_D-herbacea_M_contig916.15833.1 vs. uniprot
Match: A0A1Q4F6V8_9GAMM (Non-specific serine/threonine protein kinase n=1 Tax=Xanthomonadales bacterium 63-13 TaxID=1895867 RepID=A0A1Q4F6V8_9GAMM)

HSP 1 Score: 77.8 bits (190), Expect = 5.360e-11
Identity = 78/239 (32.64%), Postives = 107/239 (44.77%), Query Frame = 1
Query:  787 RKCSVLGQGAFGNVYLAEHEEFGDKYALKVTKPNATDAALASAVLEMM-----VLLRIQRKSHINLVSA--LAIDDTQVQLPILLPAADTDFFHVTMKGGWPLGAQLTLLLDAAKGVSHLHEELGVVHMDLKFGNILVYNSPYPHAKVADFGHTREIGERCHGM------LGTLGFVSLEVLTG-SYVARPGLDVFSLATMLLMMCSKDGRNGCIFVHPLITTAEEKRMLDDLLPNRPP 1461
            R   +LG+G  G VYLA+      + ALKV +       L+SAV+E M     VL +++      L +A    IDD  V    L      D      +    L A+L LL++ A+ V + HE  GV+H DLK GNILV +   P  KV DFG  R   +   G+      LGTL ++S E L G S       DV+SL  +   +       G    HP + T+     L  L  + PP
Sbjct:   57 RILGLLGEGGMGRVYLAQQIHPQRQVALKVVR------GLSSAVVERMRREIEVLAQLEHPGIARLYAAGESRIDDVDVPWLALEYVRGDDLVRHAQERNLDLAARLRLLIEVARAVHYAHER-GVIHRDLKPGNILVDDEGRP--KVLDFGIARLREDGAQGLTQDGQVLGTLPYMSAEQLAGDSSRIDARSDVYSLGVLAYELI------GGRLPHPRLNTSTIFEALHILRHDEPP 280          
BLAST of mRNA_D-herbacea_M_contig916.15833.1 vs. uniprot
Match: A0A1Y1I863_KLENI (Putative serine-threonine/tyrosine-protein kinase catalytic domain containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I863_KLENI)

HSP 1 Score: 75.1 bits (183), Expect = 3.710e-10
Identity = 72/227 (31.72%), Postives = 111/227 (48.90%), Query Frame = 1
Query:  739 SQALARSG-------LDDNMSRLRKCSVLGQGAFGNVYLAEHEEFGDKYALKVTKPNATDAALASAVLEMMVLLRIQRKSHINLVSALAIDDTQVQLPILLPAADTDFFH--VTMKGGWPLG--AQLTLLLDAAKGVSHLHE--ELGVVHMDLKFGNILVYNSPYPHAKVADFGHTREIGERCHG----MLGTLGFVSLE-VLTGSYVARPGLDVFSLATMLLMMCS 1365
            SQAL RS        L++      K ++LG+GAFG V+LA   + G++ A+K  K    D      + E+  L R++   H NLVS      T V   ++L  A+       ++ +   PL    ++ + + AA+G+S+LH   E  ++H D+K  NIL+       AKVADFG  + +    H     + GT G+++ E V TG     P  DVFS   +LL + S
Sbjct:  503 SQALGRSWREFTRAELEEATGGFAKQALLGEGAFGQVFLAVLPD-GERLAIKQLKAGGKDVDAREFLSEINALGRVR---HRNLVSLRGYCVTDVDCSLVLDYAENGNLGSALSSRSKLPLDWDTRMNIAVGAARGLSYLHNDTEPRIIHRDVKSANILL--DANMQAKVADFGLAKLVDSDQHDQNTMVRGTFGYLAPEMVYTGK--VTPKSDVFSFGVVLLEIAS 721          
BLAST of mRNA_D-herbacea_M_contig916.15833.1 vs. uniprot
Match: A0A1I4Y635_9GAMM (Non-specific serine/threonine protein kinase n=1 Tax=Dokdonella immobilis TaxID=578942 RepID=A0A1I4Y635_9GAMM)

HSP 1 Score: 73.9 bits (180), Expect = 8.180e-10
Identity = 88/291 (30.24%), Postives = 124/291 (42.61%), Query Frame = 1
Query:  799 VLGQGAFGNVYLAEHEEFGDKYALKVTKPNATDAALASAVLEMM-----VLLRIQRKSHINLVSA--LAIDDTQVQLPILLPAADTDFFHVTMKGGWPLGAQLTLLLDAAKGVSHLHEELGVVHMDLKFGNILVYNSPYPHAKVADFGHTREIGERCHG----------MLGTLGFVSLEVLTGS---YVARPGLDVFSLATMLLMMCSKDGRNGCIFVHPLITTAEEKRMLDDLLPNRPPGCDFMAQLMRRVFDDGTFAAKVLVPEMMYEVIRSPDVLCGHLRRFFTSAP 1611
            +LGQG  G VYLA+      + ALKV +       +++AV+E M     VL +++      L +A    +DD +V    +      D      +    + A+L LL++ A+ V + HE  GV+H D+K GNILV    +P  KV DFG    I    HG          +LGTL ++S E L G      AR   DV+SL  +   + S  GR      HP + T+     LD L    PP    +    R   D  T   K L  E       + D     L+RF    P
Sbjct:   32 LLGQGGMGRVYLAQQSHPQRQVALKVVR------GVSAAVIERMRREIDVLAQLEHPGIARLYAAGEARVDDVEVPWLAMEYVRGVDLASHVRERDLDITARLRLLIEIARAVHYAHER-GVIHRDIKPGNILVDTDGHP--KVLDFG----IARLRHGGRADLTQDGQVLGTLPYMSAEQLLGDGSGVDARS--DVYSLGVVAYELIS--GR----LPHPRLGTSTVFEALDILRNETPPPLATINAAARGDLD--TVIMKALASERGQRYASAAD-FAEDLQRFIEHRP 298          
BLAST of mRNA_D-herbacea_M_contig916.15833.1 vs. uniprot
Match: UPI00038EB67D (sperm motility kinase 2B-like n=1 Tax=Chinchilla lanigera TaxID=34839 RepID=UPI00038EB67D)

HSP 1 Score: 73.2 bits (178), Expect = 1.020e-9
Identity = 74/239 (30.96%), Postives = 110/239 (46.03%), Query Frame = 1
Query:  802 LGQGAFGNVYLAEHEEFGDKYALKVTKPNATDAALASAVLEMMVLLRIQRKSHINLVSALAIDDTQVQLPILLP-AADTDFFHVTMKGGWPLGAQL-----TLLLDAAKGVSHLHEELGVVHMDLKFGNILVYNSPYPHAKVADFGHTREI--GERCHGMLGTLGFVSLEVLTGSYVARPGLDVFSLATMLLMM----CSKDGRN--------GCIFVHPLITTAEEKRMLDDLLPNRP 1458
            LG+G FG V LAEH   G   A+KV + N     L S   E+ +L  +Q   H N+V  L + +T+ +L ++L      D +    K G   G  L      L  +  + V + H+ LG+VH DLK GNIL+    +P  K++DFG       G++     GTL + + EV  G     P +D +SL  +L  +    C   GR         G  +V P   + E K ++ +LL   P
Sbjct:   36 LGRGGFGTVLLAEHRGTGMLVAVKVLEKNKLK--LTSTTSEVKILKDLQ---HPNIVQLLEVLETERELLLVLEYVRGRDLWQYIAKTG--RGRLLEEEARALFRELVEAVQYCHD-LGIVHGDLKPGNILMDTEGHP--KLSDFGLGFRFHPGQKVTAPGGTLYYCAPEVFLGGKHQGPPVDAWSLGIILYEVVAGYCPFLGRKQQVIQKALGRRYVFPTFFSTELKSLISELLTPNP 264          
BLAST of mRNA_D-herbacea_M_contig916.15833.1 vs. uniprot
Match: A0A521HRT9_9GAMM (Non-specific serine/threonine protein kinase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521HRT9_9GAMM)

HSP 1 Score: 72.4 bits (176), Expect = 2.550e-9
Identity = 73/246 (29.67%), Postives = 107/246 (43.50%), Query Frame = 1
Query:  799 VLGQGAFGNVYLAEHEEFGDKYALKVTKP-NATDAALASAVLEMMVLLRIQRKSHINLVSALAIDDTQVQLPILLPAADTDFFHVTMKGGWPLGAQLTLLLDAAKGVSHLHEELGVVHMDLKFGNILVYNSPYPHAKVADFGHTREIGERCHGM------LGTLGFVSLEVLTGSYVARPGLD----VFSLATMLLMMCSKDGRNGCIFVHPLITTAEEKRMLDDLLPNRPPGCDFMAQLMRRVFD 1503
            +LG+G  G VYLA+      + ALKV +  +  D       +E++  L     + +       +D   V    L      D      +    L A+L LL++ A+ V H H   GV+H DLK GNILV     P  KV DFG  R   +  HG+      LGTL ++S E L G+     G+D    V+SL  +   + S  GR      HP + T+   + L+ +    PP    ++ L R   D
Sbjct:   95 LLGEGGMGRVYLAQQLHPQRQVALKVVRGLSVLDIERMRREIEVLAQLEHPGIARLYAAGESRVDGVDVPWLALEYVRGLDLASHADQNRLDLPARLRLLIEVARAVHHAHGR-GVIHRDLKPGNILVNEHGQP--KVLDFGIARLRDDAAHGLTRDGQVLGTLPYMSPEQLQGN---SSGIDCRSDVYSLGALAYELIS--GR----LPHPRLNTSTVYQALEIVRNETPPRLATLSTLARGDLD 328          
BLAST of mRNA_D-herbacea_M_contig916.15833.1 vs. uniprot
Match: A0A8B7C8C6_PHODC (LOW QUALITY PROTEIN: calcium/calmodulin-regulated receptor-like kinase 1 n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7C8C6_PHODC)

HSP 1 Score: 70.9 bits (172), Expect = 3.830e-9
Identity = 68/231 (29.44%), Postives = 113/231 (48.92%), Query Frame = 1
Query:  796 SVLGQGAFGNVYLAEHEEFGDKYALKVTKPNATDAALASAVLEMMVLLRIQRKSHINLVSALAIDDTQVQLPILLPAADTDFFHVTMKGGWPLGAQL--TLLLDAAKGVSHLHEEL--GVVHMDLKFGNILVYNSPYPHAKVADFGHTREIGERCH--GMLGTLGFVSLEVLTGSYVARPGLDVFSLATMLL-MMCSKDGRNGCI-FVHPLITTAEEKRMLDDLLPNRPPG 1464
            +V+GQGAFGNVY A H       A+KV   N+          E+M+L R+  ++ +NL+   A D  Q  L  +  +  +    +  +   PL   L   + LD A+GV +LH+     VVH D+K  N+L+    +  A+VADFG +RE    CH   + GT G++  + ++     +   DV+S   +L  M+  +  + G + +V      AE +   ++L+ +R  G
Sbjct:  116 TVIGQGAFGNVYKA-HMSTWVTVAVKVLSANSKQGENQFHN-EVMLLGRLHHRNLVNLLGYCA-DKGQHMLVYVYMSNGSVASQLYGEKHGPLSWDLRVNIALDVARGVEYLHDGAVPPVVHCDIKSSNVLL--DQFMRARVADFGLSREAVFSCHTSNVKGTFGYLDPDYVSSRTFTKKS-DVYSFGVLLFEMIAGRKPQQGLMEYVELAAINAEGRVGWEELVDSRLAG 340          
BLAST of mRNA_D-herbacea_M_contig916.15833.1 vs. uniprot
Match: UPI00145DAB8B (serine/threonine protein kinase n=1 Tax=Yonghaparkia TaxID=355929 RepID=UPI00145DAB8B)

HSP 1 Score: 70.1 bits (170), Expect = 6.620e-9
Identity = 58/194 (29.90%), Postives = 89/194 (45.88%), Query Frame = 1
Query:  799 VLGQGAFGNVYLAEHEEFGDKYALKVTKPNATDAA-LASAVLEMMVLLRIQRKSHINLVSALAIDDTQVQLPILLPAADTDFFHVTMKGGWPLGAQLTLLLDAAKGVSHLHEELGVVHMDLKFGNILVY----NSPYPHAKVADFGHTREIGER----CHGMLGTLGFVSLEVLTGSYVARPGLDVFSLATMLL 1353
            ++G+G   +VY A  ++   + ALK+ KP   D   +     E+ VL  +     + L  A + ++    L  +L   D D   +TM  G   G ++ ++  A         + G+VH D+K GNILV         P AK+ADFG  R + E        +LGT  ++S E   G  V  P  DV+SL  +LL
Sbjct:   31 LIGRGGMASVYEAADQQLPRRVALKIFKPELADGDDMRRHEAEVAVLASLNHPGLVTLYDASSTEEGGAVL--VLELVDGDDLRLTMDAGRLPGEEVAVIGAAVADALAYSHDRGIVHRDVKPGNILVPAHDGTDTAPRAKLADFGIARLVDETRVTATGAVLGTAHYLSPEQAIGGTVG-PASDVYSLGLVLL 221          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig916.15833.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWE9_9PHAE7.310e-3331.65Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FYY1_ECTSI2.370e-2831.53Protein serine/threonine kinase n=1 Tax=Ectocarpus... [more]
D7FL13_ECTSI1.210e-1726.70Membrane-associated tyrosine-and threonine-specifi... [more]
A0A1Q4F6V8_9GAMM5.360e-1132.64Non-specific serine/threonine protein kinase n=1 T... [more]
A0A1Y1I863_KLENI3.710e-1031.72Putative serine-threonine/tyrosine-protein kinase ... [more]
A0A1I4Y635_9GAMM8.180e-1030.24Non-specific serine/threonine protein kinase n=1 T... [more]
UPI00038EB67D1.020e-930.96sperm motility kinase 2B-like n=1 Tax=Chinchilla l... [more]
A0A521HRT9_9GAMM2.550e-929.67Non-specific serine/threonine protein kinase n=1 T... [more]
A0A8B7C8C6_PHODC3.830e-929.44LOW QUALITY PROTEIN: calcium/calmodulin-regulated ... [more]
UPI00145DAB8B6.620e-929.90serine/threonine protein kinase n=1 Tax=Yonghapark... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig916contigD-herbacea_M_contig916:23779..36906 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score166.4
Seed ortholog evalue3.3e-38
Seed eggNOG ortholog2880.D7FKP3
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons12
Model size2323
Cds size1464
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig916.15833.1prot_D-herbacea_M_contig916.15833.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig916 23998..36266 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935732.6234076-UTR-D-herbacea_M_contig916:23778..239971622935732.6234076-UTR-D-herbacea_M_contig916:23778..23997Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig916 23779..23997 +
1690880679.2245712-UTR-D-herbacea_M_contig916:23778..239971690880679.2245712-UTR-D-herbacea_M_contig916:23778..23997Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig916 23779..23997 +
1622935733.02726-UTR-D-herbacea_M_contig916:36266..369061622935733.02726-UTR-D-herbacea_M_contig916:36266..36906Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig916 36267..36906 +
1690880679.3834465-UTR-D-herbacea_M_contig916:36266..369061690880679.3834465-UTR-D-herbacea_M_contig916:36266..36906Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig916 36267..36906 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935732.635381-CDS-D-herbacea_M_contig916:23997..240861622935732.635381-CDS-D-herbacea_M_contig916:23997..24086Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 23998..24086 +
1690880679.239827-CDS-D-herbacea_M_contig916:23997..240861690880679.239827-CDS-D-herbacea_M_contig916:23997..24086Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 23998..24086 +
1622935732.6508322-CDS-D-herbacea_M_contig916:28516..285881622935732.6508322-CDS-D-herbacea_M_contig916:28516..28588Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 28517..28588 +
1690880679.2503562-CDS-D-herbacea_M_contig916:28516..285881690880679.2503562-CDS-D-herbacea_M_contig916:28516..28588Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 28517..28588 +
1622935732.6659691-CDS-D-herbacea_M_contig916:29586..296441622935732.6659691-CDS-D-herbacea_M_contig916:29586..29644Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 29587..29644 +
1690880679.267538-CDS-D-herbacea_M_contig916:29586..296441690880679.267538-CDS-D-herbacea_M_contig916:29586..29644Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 29587..29644 +
1622935732.6835933-CDS-D-herbacea_M_contig916:30091..302561622935732.6835933-CDS-D-herbacea_M_contig916:30091..30256Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 30092..30256 +
1690880679.27864-CDS-D-herbacea_M_contig916:30091..302561690880679.27864-CDS-D-herbacea_M_contig916:30091..30256Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 30092..30256 +
1622935732.8735716-CDS-D-herbacea_M_contig916:30611..308931622935732.8735716-CDS-D-herbacea_M_contig916:30611..30893Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 30612..30893 +
1690880679.288993-CDS-D-herbacea_M_contig916:30611..308931690880679.288993-CDS-D-herbacea_M_contig916:30611..30893Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 30612..30893 +
1622935732.890095-CDS-D-herbacea_M_contig916:31354..314101622935732.890095-CDS-D-herbacea_M_contig916:31354..31410Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 31355..31410 +
1690880679.2982535-CDS-D-herbacea_M_contig916:31354..314101690880679.2982535-CDS-D-herbacea_M_contig916:31354..31410Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 31355..31410 +
1622935732.903584-CDS-D-herbacea_M_contig916:31743..318901622935732.903584-CDS-D-herbacea_M_contig916:31743..31890Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 31744..31890 +
1690880679.307857-CDS-D-herbacea_M_contig916:31743..318901690880679.307857-CDS-D-herbacea_M_contig916:31743..31890Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 31744..31890 +
1622935732.9180055-CDS-D-herbacea_M_contig916:32295..324381622935732.9180055-CDS-D-herbacea_M_contig916:32295..32438Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 32296..32438 +
1690880679.3232245-CDS-D-herbacea_M_contig916:32295..324381690880679.3232245-CDS-D-herbacea_M_contig916:32295..32438Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 32296..32438 +
1622935732.9336805-CDS-D-herbacea_M_contig916:32736..329061622935732.9336805-CDS-D-herbacea_M_contig916:32736..32906Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 32737..32906 +
1690880679.3336282-CDS-D-herbacea_M_contig916:32736..329061690880679.3336282-CDS-D-herbacea_M_contig916:32736..32906Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 32737..32906 +
1622935732.9725635-CDS-D-herbacea_M_contig916:33878..339531622935732.9725635-CDS-D-herbacea_M_contig916:33878..33953Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 33879..33953 +
1690880679.3505445-CDS-D-herbacea_M_contig916:33878..339531690880679.3505445-CDS-D-herbacea_M_contig916:33878..33953Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 33879..33953 +
1622935732.9880288-CDS-D-herbacea_M_contig916:34761..348571622935732.9880288-CDS-D-herbacea_M_contig916:34761..34857Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 34762..34857 +
1690880679.361433-CDS-D-herbacea_M_contig916:34761..348571690880679.361433-CDS-D-herbacea_M_contig916:34761..34857Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 34762..34857 +
1622935733.0043957-CDS-D-herbacea_M_contig916:36155..362661622935733.0043957-CDS-D-herbacea_M_contig916:36155..36266Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 36156..36266 +
1690880679.3720095-CDS-D-herbacea_M_contig916:36155..362661690880679.3720095-CDS-D-herbacea_M_contig916:36155..36266Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig916 36156..36266 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig916.15833.1

>prot_D-herbacea_M_contig916.15833.1 ID=prot_D-herbacea_M_contig916.15833.1|Name=mRNA_D-herbacea_M_contig916.15833.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=488bp
MFGMRATHKLESPARPIISARHGKPIADPGYITGCLVRREHDYYGAHRQV
CGVRRLDVNQVKEAAAAIVPGAQEGYSLLLGVVILFVMNAMLIVPQAVRN
RLAQRTASANLAVVQPAEREARPVPESEALRLSSPLQNPRTSPGLWAATD
LWSMGGLQAEFVANVATLGGGPRSQALARSGLDDNMSRLRKCSVLGQGAF
GNVYLAEHEEFGDKYALKVTKPNATDAALASAVLEMMVLLRIQRKSHINL
VSALAIDDTQVQLPILLPAADTDFFHVTMKGGWPLGAQLTLLLDAAKGVS
HLHEELGVVHMDLKFGNILVYNSPYPHAKVADFGHTREIGERCHGMLGTL
GFVSLEVLTGSYVARPGLDVFSLATMLLMMCSKDGRNGCIFVHPLITTAE
EKRMLDDLLPNRPPGCDFMAQLMRRVFDDGTFAAKVLVPEMMYEVIRSPD
VLCGHLRRFFTSAPSDTPDMASFMGVVQQLEADVRQP*
back to top

mRNA from alignment at D-herbacea_M_contig916:23779..36906+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig916.15833.1 ID=mRNA_D-herbacea_M_contig916.15833.1|Name=mRNA_D-herbacea_M_contig916.15833.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=13128bp|location=Sequence derived from alignment at D-herbacea_M_contig916:23779..36906+ (Desmarestia herbacea DmunM male)
GACCCGTCGTGGGTGTTCAGAAAGTCTTCGGGAACAGAACAGGGAGTAGA GCCTCCAATAACATCAACAACACCGTTCCCTCATGCCTCGGGCGATTTCC CACGGTATCACAAGATTACGCCACCCTATTTCTGCTAGTAACATGAATTG TGTTCGCACCGGCCGCGCTGGTAATACCACTTGTAGCCCGAGGACTCCGG CAGGAGCCGCATTTGGAGGATGTTCGGAATGCGAGCAACTCATAAGCTGG AGTCGCCCGCCAGGCCGATAATTTCTGCGAGACATGGAAAGCCGATAGCG GATCCGGGGTGAGTGCGGCAGAAAACCACTTCTGCATGTGTACTCTATCG AATACTGTATGCTTGCTTTAGTGGCGGACTCCTGTGTTTTTGCGTATGAT GCGATAGTTGGATGCAGTGTTTTTTTAGTACACTACGAGTATATGATACT TTTTTTTTTTTTTTTCCGGCCAATTTATTATCTTCGCCCGATTCTTTCTC TACGATAGCTCATCTTTCTTCGTAAATTTAACTCGGATCCGGGGTCACAT ACTGTAGCAGGCCCTCCTCCCTCCTTCCCACTACGATTCTATCGTGTTAT TCATATCATACCTGGTACCTAGTATGTCATACCTGGTATGTCATACGACT ACTACTACTACTTTTACGATAATACAAGTACTGTACTATCCTACTGTTGT TGTTGttTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTCTGTTGTCTTCTC GTGGAAAGTCGTCCTGTCTACCCCACGACCTATGACATCCAGTACGTGTA CGAGTAGCGACCTGAGAGTCGTTACGCCTGTACTGAATCGTCCATCCTAG ATAGAAAACAGCTAAGTACTTGTATGTACGCGAGTAGTGTACAACGGTAA GAGTACTACTAGTAATTGGCGGTAATGAGGCGCGACCTCAATACCTGCAG TAGTCAAACCTGCGATTTAAAAAAAAAAAAAAAAAAAAAGCACAGACAGC ACAGACAGCACAGACCTGTGCCTACACACGTTGCCGCACCTAGCTCTACC AACTGTGAACGACTTTCCACCCCACCAGGACGAGAAAGTGTATTTCGTGT GTGTGCGTGCACAGAGCCCACGGGGACTGGATTTGGTGACTGTGTGCGTC GAGCGCGGTGGTGAAACGTGGACCAAAAAAATGTTGAATCACACACACAC AGACAAACACTCACACACATGCAGAAAAACTCAAAACAAGGCACTCACAC ACATACAGTACTATCATACGAGTACTGTACTGGTAATCCGCGCGACCGAC GTATCACATATTATCATTGTTACTTACAAAGACATCAGCCGTGACACGAA GATAATACGTAGTAGTAGTGAGCTGGATGATTATCCCCTGGCCCCCGAAT CAGTTTGGAACGCCACGGCTGATGTATTTGTATGTACATGTAAACTTAAT ACTACTGGTATAGTACTGTAGTACTGGTAGGCACCACGACGTTGCCTCGA AGGGTGAGAGTGACATCCTACCCCAAACCCAACCCCAACTCCAAGTGCGA GGAGCATACAAGTACAGGGTGCAGTACAACAATACTCGTAAACAGTACTC GTGGTAATAGCATAGTCTAGAGCTATACAGCAGGGGCAGGACAAGGTAGA GTACAACAGTAGTAGTAGTAGTAGTAGTAGTAGACAGGGTGCGTGTGTGC GGCGTGTAACGCTCTTTTTGTACAACAACAGACATGGAGAACGAAAACGA TAATAAAATAATTATGTAAGTTAAAACAGTAATTCACTGCAGGACAAAAT TAGTGGGCGTGAAAACCCGAAGAAGGAATGGGATATCTCTTGCTGGAACC AGCTCGTATTTCGAGTAAATTTTTTTTTTAGAAAAACGCAGTATTAATAT TAATATTAGTATACTCGTACCGGGGGGGGGTTCTGTGTGACAGTGAACAT TTAGTGGAATGCCCCCCAGCCCCCCCTTGTTCAAATAGCGCTGCCAATAT CGCAGGATATAAGAGCTACCCAACAGCCACAACTTAGGCTGTGAGCTCAG TATGATACTGCAACACACAGTGTGAATATGTAATTAAGTTGTTTTTGTTA TATGGACGCCCGGAAAGTAGAGGAGCAAACAGGTAGGCGAATGCACGGGA CAGCGAAGCCCTCCTCTATGCTCCTATGCAGCAGCAGTGTGCCATGACAA TACCGTACAGTAACAACTACCCGAGGAAACGTTATAGGAACCGGTCCCAG AACCCATAGCACATTCCTCACAATGTTTTCCGTCTACGGTACCCGGTTTG TAACTCTCAGTTTGTTGCTATTAATACCTACCTCGTATAAGCTTTGAGGG ATAAGCTGTAACGAACACCCCTTTCTAACAAAAACGGCTTATTGCATGTA TATAGCCTCCCCCTTGAAAAAGGCACTGACAGCGTGCGCCGTGCAACAAT AACCAGCCCAATCCGCTGGTGGTACATTGTGCTGTTGGAAAGAGCCTGTG GTGGTGGTTGCCATTCCTGGGCGGGACGAAGTTGTTGTTAATTGTAAATT ACTCCCCCCGTAGTCGGTGTTGACGGTACCGCTTACCGTATGTCGTCGGG CATTACTGTGACCGCGCTGTTGTTCACGGGCGTGGTCCTGCTGCCCACAC GCACTACATATTCTGTGGGAGTTGTGTGCGCCTCGTTGGAGGCGTTTTTT TTGGGCATTAGCCAAAAACAGGTACACCTGGCCACTTTCTGGCCAAAAAC AGGTACAGGCGAGAAACAAGGCAAAAACACACGCGAGGAGCCCGCTGATT GGCCAACATCAAATCGTACCTGTTTTTGGCCACAAAATAACCAGGTACAA CTGTCACTGTCTACTCTGCTTGGCTTCAACTGTTTTTGGCCATACCATTA TCTGTTTTTGGCCAATTTCGTCAACTTTCAGCTAATCAGATGTTCCAATT TTTATATATACGAGTAAGACACCAGAACGCGCGCCGATGCGCGACGAATC ACAGAAGACGCGCGAAACGCACGACCAAAAACACACCAGGTCACCTTTAC CGCACCCTTCTACGGACACACATACACACGTCTATCTCAAACTCCTCCAC CATCCATATAGTCCATCGACACGCTCTACAACACAACACAAGCACCATGG CGGCAGACGCTTCTTCTGCTGCAGCAGCGCTGGACCTCAATGTCGGCTCC ATGTTTCCAACCACAACAGCACTGCGTGCAGCCGTTGCCGCGCGGTTTCT GAAGGATAAACGCGGATACAAAGCAGCCAACGGTGGGGGCCGCCAAAAAA AGTACTTCTGCTCCGGGATCGCCGTCGCGGGATCCAACGTTGACGGTTGC CTTGCGAAGGTCCTTGCCACGAAGTCGTCGACGAACGAGTGGCGCGTGTC ACGAGTCAACTTCGCCAGATAAAATGCGTCACTTTCCGGCCAAAAACAGG TATGCGTGTCACTTTGCAGCCAAAAACAGGTACACCTGCCCACTTTCCGG TCAAAAACAGGTACAGCATTCGTGCGCCTCCCATGTACCTGGTTTTGGCC GTAAAGGGGACAGGTGTACCTGTTTTTGGCGTAAAGGGGACAGGTGTACC TGTTTTTGGCCACTGCCCTTTTTTTTGCGTTCGTCAACAGTGCCCTCCAT GGTGGAGTGTGCGTGCGGATCGGCTCGCATAAAAATGTTTGAACAAATAT GATACTCTTCGAGCACAACGACGAGAAGAAAAACAGTACAATCACTGCCC CACGACAAAATGTTGGCGTAGTCTGCGCTCGCCTTAGTGTTGACGGTTGC GCTTAGAAGTACGTGTTGTGGTGGTGTGGGGCGTGAGTCCTGTGGTTGGT CTAAACCATTACAAATACAGAAACAGCAGGAAGCGCCAAATATGTATTTT TTATTTGGGGGCCTCCCACATGGGGTGGGTGTACTCTGGCACCGCCTCCC CGCTGACGCCATACTAAGTGCTAGATAAAACATGCTACCACACTATTTCC TACATAAAGCACGTTCTACACTAAATCCTATGTGTGTGTGTGTTGTCTTC GCACTAAAAAATCGTCCTTCCTACCCTACGACATCCAGCAGTAGTAACGT ACTCAGAGTCTGTACTGATTCTTCCATCCTATTAATAGAGAGATACGAAA TTCCGTGGTCACAAGCTACATCATAAATACCACCAAATCGCAAATTGAAT AATACCACCATCAGAACAACGGAATAAGAAACAAAGAGCATAAGACGAAA AAAGAAGGTAAAGCAGGCAGGAAGGCAAGGAACCTAGCCTAAGGACACCA GAAGACAAAGAAAACAACATATATAGATAGAACAGAGGGACAGAAGGACA AGAAAAAAAGGGAATATACCCAAGCAAGCAAGGAAAGTAGGCAGATATCT ATCGCCGCTTTGCTTTAGTATTTCTTAGTACTATACTATGATACTATATA CCGCGCTGTATGCCGGACATACTCACTCGCAGTCTTGTAGTGCATAGTAC ATAGTAATTAATTCACGGTGTTGTCTGCGGAATGCTGTTTACCCCTTTGC ATTTTCCTAGTCGCCTGCTACATAAGATAGACTGTAGAATAGCAATAACT ATTGGATGGACAGGGCTGTCGTGCAACTAGAAACATAGTAAGAAGCGCCA AATATGCCAAATGAAATGCAGCTTGAGTACATTATAATCCTTTTTTGGAA TTTGCTGCCCTTTGCACCGTGCCTCTCCCCCTGGTTAGATATATCACGGG ATGTCTCGTGCGCCGTGAGCATGACTACTACGGGGCTCACCGGCAAGTGT GCGGTGTGAGGTGAGGTCTCCCGTGTCGTTTGGTTTCGTCGGTGCGTGCT CGAGTAAGGATGAGGCTGTCTCTCGCTAGAGCCGCGCAGTGTGGATCTAT GATGGTGATACTGGGCCACGCGTGGCTTGGCTGTCCTTTGGTGCTGGTGT GATGGTAACTGTCGCTGTACGTGTGTTGACACCCCTGAGACCGCGAGCGC ATGAGAGACCCAAACATGACGAAACAAACATAGATAGCGTCTGTATTTCG TTGATAACGCGCGCAAGGAGATCCGTACGGCGCTGAAACCACCCTCCCTG CGTGGTGCATGATTGGGTGCATGAGTGTGGTGTCGGTTTGTGGCTTGGGC GTCGTCCTTTTGTGGTTTGCTGTATTCGTTTTTTTATGAGAGGCGGTGTG ATTTGAGACACGAAAAAAGGAAAATCACCCCTATCTCGATTTTGAGTGTT GCTAATTGCTTTCGTTTTTTTTTTGAGTGTTGTGTTTCTTCAACATGTGT TTTTGACTTGATAAACCACAAGTTCTCTATCGGAGGACGAAAATGACTTG ATTATAGAGTTCAAGAAAAGGACGAACCTTGTACGGTATTCAGAAATTTA GATGCCGGTGATGGTTGGGATGCCTGTTGCAGTTGTTGTTGTTGTCTCAC ATACAAAAAAACATCCTTTTTATCCTATGACATCCCGCAGCGTTCTCAGA GTCTGACATCCCGCAGCTAAGCTCTAGAGCACCAAGACATAGATGAAAAA AAGAAAGAAAAATCAGTGGTGAGAGGACAGTGCGAAATTAGGATTATAGC AGGAAGGCTTGGAGCAGGCGCACACCGTTTTTTTGTGTGTCTACCGGCCG ACTCAGGCGTTGAAAACACACGGGAATCTGAAATATATCCCGCGTTGAAG GTGTTTAGCGACTCCCGACACGTCCCTCACCTCTCTCAATATTGCCGTGA AACTTCACCGCATGGTGGCACTTACCCCCCCCCCCCCCGCTAAAATCGAC TGAACCAGGCGCCTTGATGTCAACCAGGTCAAAGAAGCGGCGGCGGCCAT TGTCCCAGGCGCGCAGGTCAGAGCTGGGGTGTGTTGAAATTGCTTTCACG TTCGACAATGATATAGTACTACGACAGTTGGGACTACTGTATTTGTTATG TTGACACACACTAGCTATTGGTGCCGATACGGCGTGGGTGACGGTTCCGG AGGGTGGGTGGAGGGACATGCTCGGCCTGCAGCGTGATCTCTCTCGGACG ATTGATTGCACAAAAGTGAAGCTTATCTTTCACGCGTCGTAAGGGTATGG AGTGCGCAGGAAAAACTTCAGTCGGTGGGGTATCACATGGTACGAACAAA CTTCCCCCGATTGGTCTTGGTCATACTGATGTACAACTAGTAGAGTGTTT GCGCAGTAGATGTGATAGTACTATTAATAAAGTGGGCATTCATTTGTTTG TGGTCTGTCCGTGTTAATATCTCCGCTCAAACTGCATGCCGTCCACTACC CGTATCGCCTCAGGAGGGTTATTCGCTTCTGCTGGGTGTGGTCATCCTTT TTGTGATGAACGCAATGTTGATCGTTCCCCAGGCGGTGCGCAATAGGCTT GCGCAGCGTACAGCTTCAGCCAACTTAGCTGTAGTACAGCCAGCAGAGAG GGAGGCACGTCCTGTTCCCGAATCAGAGGTGAATTGGAACGTTTGTGTTT GTAGTTCCTCGAAGCTTGGTTTCTTCCCCTGTTATATCTACCGTATGTAT CGTTTGGAAATGCTGGCGCCTGGCACGGTGGAAGACGGTGTTCAGAGAGG CGCTGCTGTTTCTTGCGGTGTCGAATGTCTCTCTATCTGGCCACTTTCGC GCGCGCGGATGAAGTAACATACAGCGGCACCAACGTTTTCTCCGTGCGCG CTGCTGATTGCACCGCTCGCGCAATACGTACGCTAGTGATTACATGTTCA TATTGCACCAAGAACACAAGCTGTCCAGGCCAATGTTTGCTGATTTTATC GCGCGTGTGTGCCCTCGTTCCATCTCTACCCAGGCCCTGCGGCTTTCGTC CCCTCTACAAAACCCGAGGACGTCGCCAGGATTGTGGGCGGCAACGGATC TTTGGAGCATGGGGGGCCTCCAGGCAGAGTTTGTCGCAAACGTGGCCACG CTTGGGGGAGGCCCCCGATCGCAAGCGTTGGCTCGCAGCGGCCTTGATGA TAATATGTCAAGGCTTCGGAAGTGCAGCGTACTCGGGCAGGGAGCTTTCG GAAACGTGTATCTTGCGGAACATGAGGAGTTCGGGGACAAGTACGCGTTG AAGGTCACGAAGCCGGTGAGACCATCTGAGGCCCTGTTGTTATGTACCAT GTAGCGTGTCAGTGGGGAAGACGCTGCTAACAGGGATTGCGTATTTGTTT TTGTCTGTAGCCGTGGTATTTTGTACCGTGTTCCTGTTGATAGCGGCGGC GATGCGGCTCAATCGGTCCTGTTGGTAGTAGAAGGTTTAGTGAGTGTTGA AGGCAGGCGGCAACACGCCTCATTATAGTGCACGCCGACGAGGGAGTTAT GTCTTGGCCCAATAACCTTGTAGCGATCAACGCTGCCTTGCCTTTCCTAC TCTTTCAGCGTATCACAAATGTTTTGCGAGGAACTGCTATTGGTAGAGAC CAGCCCGCCGTTGTTGACTTTGGTTATAGTAGCACCCGTGGTGTCCATGC TGTATTGTGTATTTTCGCTGATTTCGCCATGTTGTTTTGTTGTTTCGCCC CTCGCTGTCTGACGGCTGCCACACAGAACGCGACCGACGCGGCGTTGGCC TCAGCCGTACTGGAGATGATGGTGCTGCTTCGGTGAGTGGGCGACGATTG ATACATGTATTTGATACGTCATGTCTTGTTATTGAACGCACTGAGCGGGG GAGAAGGGGCACGGGGTGTGTCCTCCATGTGGCCGGTACGGGACCTATCA TAGGTAGCGTTGTGCGTTTCTATTTCGTCTCGAAAGGGTGTTTCATGCTC GCGTGGATGTCAAGCGTTGCGTGTGCAACGTGATGCGAGTAACGGTGTGA TGTGCGCCTCCGAGCCGTTTGTTTTGTGTCACCGACATAGCAAGCAAACC TTGGCCAATTTGGTGTATTTTGTTGGCCCTTGCATCGCCTCTCGTCATTC GTTATTTCCTCTCAGCATCCAGCGCAAGTCGCACATCAATCTGGTCAGTG CTCTGGCCATCGACGACACTCAAGTCCAGCTGCCCATCCTTCTCCCGGCG GCAGACACGGACTTTTTTCACGTCACCATGAAAGGCGGCTGGCCCTTGGG GGCGCAACTCACGTAAGCCGAAGCCAACTATTAATAGAGATATATGGTGA ACAATGCGAGTTGTAGTGTTGGTATGGCAGAAGCGGAATGCATGCATCGG TGTAGTCCGGTAGTGTGATGCTTGGAGTAGGAGAAGTAGGAGATGTCGTT GCGGCTGGACGGCCCAGGGAAGTGTTGCTCTTGCAGGTGGATACTATTCT CGAATCGTGGGCTTGCTACTATATTTCGTAGTATTTTTGTAGCTGTTGCA GCTTGTGACATTAGTGTGTTTGTGAAGGAAACGGGATGGACACTGCGGGG CGATGGAGTACAGGGACTGTGTACGGTCTCGGGCAGTTGGTTTAGTTGCA CGTCGTTTCTAGCAACTTATGGTACCTTGTGCCACCTCTGCTCTCTTTGT GTGTGTATGGCGTTCAGTCTCCTGTTGGATGCGGCAAAAGGTGTAAGCCA CCTCCACGAGGAGCTGGGCGTGGTCCACATGGACCTCAAATTCGGGAATA TTCTGGTGTACAACTCCCCGTACCCGCACGCCAAAGTGGCCGACTTTGGC CACACTCGAGGTGAGGGGTCCAACGTCGCAATGGGACGCAGCTTTCTGTT GGACACGGTAGATTTTGCTATTATAGCCACCTTGACAATTAATACGAGTA TGGATACATTTTTAACCCCCCAACAGACTGTAAAACCCACAGCAGTCGCG GCAACGTTAGAGCTCAGAAACCGAGCTCGGCTTGCCTCCATTTTTGTTTT TTTACGACAGAACCTAGCGTGTATCATCCCACCTTCGTGCTGTCTTGTCC CTTCTCTCTCGTTCCCCTGTACGCTAATGTGTCTCCCACCCCCTCTTGGT TTGAACAGAGATTGGAGAGCGGTGTCACGGCATGTTGGGGACGTTGGGGT TTGTGTCACTGGAGGTGCTGACGGGGTCATATGTTGCGCGGCCGGGGCTG GACGTGTTCTCGTTGGCCACGATGCTCTTGATGATGTGCAGCAAAGATGG CCGCAATGGCTGCATATTCGTGCACCCGGTGGGTTGGACATACGGGGATA GCCGGCGGCGTGTGGCCTTTATAATATGGGGTACAGTACAGTTCAGTATC AGAGGTACTTCACTGGCGGTTGTGGTGTGTGCCGTACATAGAGAGGCAAA CCACAAGACTATAAGGTACAAAGCTTGAAGGAACAATACATACATTCAGT TGCAGCAGCGACCACAGCGGTGTTTTGTACGCAGAATGATGCCCTCTTCT GCCGATTGTCCTGTGGTATTCAGCCCTTGCATAGTTAACTTCAATTATAG CGTCGTAGCTCTAGGTGTCTTATCTTTGTATACTTGTGAGACAAGCCCTT GCCTTTTTTTTTTTTTTACGATTTTTCCGTGTTTTGATTTGCAGCTTGGG ATAGACAGTAGATGATGTTTAGtTTGTGTGTATGTTTTTGTTGTTGGGTG CGCCAATGGCTACATGTGTCAATAACACGGCACCGGCCACGTTTTGTCGC GCCTGTGTTGATGTTTGTGACGTGAGCGTGATCGAGCTTCGATTATCAAA GAAGGAAACACTGTAAAGGGGGTCCAGACCTCGGATCCCTTAACGCATGA ATCAGAGGTGCGATTGGAGCGGTCACCACGCGCCTACAATTATACCTTGG AGGATTGTTGGAGTATAGATCTTGTAGCGTCATCCTCCCCGTCGACTTCC TTACGCATGTACGACACAATACACGTACTGTAGTGCTCAGGCGCGATATA CAGCGATCGGTACCTTTGCTCTCTGTAGTGTTTAAGCTATTGACTTACTG AAAACAAGACAACTGAATGCTCCGAATGAACAAGCTACGAACAAGCCAAC ACGTATACGTATCCCGAAAAGCGAACGCCCCAAATCTGCACGAGCCACGT GTGCACGCCACAAAAATCGCGCCACCAATAGTTGCACGAGCCAGTAATAA GACACCACCCTTTGCTTTCCGCTGCCCTACGTACGTGCACGTCACTTCAG CTCATTACGACCGCCGAGGAGAAGAGGATGCTGGATGACCTCCTGCCTAA CCGTCCACCTGGTTGTGATTTCATGGTGCGTGGCTGTTCATTTGGTGTGT AGTTGTACTCCTTCCATGTGTTTTTGTTTTGATGACACACGACGGCGTAA GCATTAGCATGAGCCTTGTTGTTTTTTCCTCTTCGGTTGCGCTACTGCTG TGCGATTTTGAGTTCATTGATGTACTTCGTATTGATTAGATGGCAGTGCT ATGGTAGGTGTCCCTGTTTTAAGTTTGCACCACGTTTCGGAAAAGCCGCA GGGAGGAAAAAAGGGCAGGGTGTCGTATAACGACTCGCTGGGGGAGGGAC ATCCACCATTCGTATGAGAATGGGTATACTATGATGCAACGATTAGAGTT GGCCAAGATTGCCGTTTTTTGGTCATAAACGTGTCGGCGACATTTGGGGC TGTCTCTATGCCAACGTAAACATGCGCGTCAGTACATCCGTGTCTGTTGC TGAAGGACCAGTCTACTATGGATGCGAGGTGTTGTGAACACGCTGTGGAT CGTTCCAAtTTTTTTTGTCGGACCTCCGCCTATCTGACGGCATTGACCGC TGTCGACCGGCAGGGGCTCCCAACACGATTTCCACCTTTTTGCTAGCGCT ATTCTTGTACTTATTGTACTGCGAATATGCCACGAGTGGACATCTTTTTA CTTTGTGAATATCCAGTATTGCGCTCGCCGAATGTTGTCCTTCCGCGTGT GATAACCGCAAGGATTACAGCATGCATTCTCGGAATCTACTTATCGTACT TACTTGAGGCAACGGTTCCCGTTCACATTTTGACCCGCACGATACCGTCT CCCCCTGCGGATGGCTGGTGTCTCCTTTTTCAGGCACAGTTGATGAGGAG GGTCTTCGACGACGGGACGTTCGCGGCAAAGGTGCTCGTGCCGGAGATGA TGTACGAGGTGATCCGGTCGCCCGACGTGGTAAGTACGTTATGGTGTTGG ACGGATTATGTGTGTGAGAGATGCCCCAGTTGTACCTTGTCCCGCCGATG CCGCGTTTTTGCTGCAGTCTAGGTACGGTGCATGCAATACCTAGTGAGGA GACGCGACCAACATGTATTTGGATTTTCAACCATTGTTATCTTCCGGCGG ACGGGCAAAAATAGAGCTTCACCCTACTTACGTTCGATATGATAGATACA TATTTCTTGCTAAACACATAGTCCCATGACGTTAGCTTTCGCGCAGCTGA GGGACACAGTGTCTAGTGCACACCGTGGGCTGCTGCAGCGTCCATACCGC AAAAGTTGTTGTTGTTGTTGTATTGCACCAATCGTCCGTCCTCATTAATC CACCCATCCGACGGAAGATCGACAAAACAAGTATCGCAGGCGAAAATAAT ATTATACGAAAGATTGAAAAACGAAAGCAGTAAGAAACAAGAGGACTTCA AGAAAGGCGGTAAACTTCGAAAATGGTCGTACTCCTGCGACCTCGGGTAC CCGCGAGTCCAAAAGTTGTACCCGACCCGCCAATGGGTATTACTTGTCCG GGTATACCCGCCCGGTACCCGTAGGTAGTCCAAAAGGGGTACAACTCTAG TCATAGCACACCTCTTACAAATTGCAATGGTTTAAGCTGTTTGAAGGTTC TCTCTCTTTGTGTTTAACCTCTGTGTTTTGTTTTAAGCTGCTTTGACCTT cTCTTTTGTTTTTTTTTGAATATTTTTCAATCGTTTTATACGAAGTATTG CCGATTCGCCCTCTTAGTTGCAGAACACAACGTTATCTTTTAAGAACGAG AGCTTCGGAGGCCATAGGCCTTGAAGGTAGCCGCCCGGAGAGGAAACTTT GAACGTCTTGAAGGTAGCCCCCCCCAGGGTAGTGTAGGATTTGCCGAAGC TCACCCACTAACAAAAATACTGACTAATATGCCTTGCCCGCCGGACTCGG TCCAGTTGCGGCCCACCCTACCCGTTCGGGCCTTCGTCCTCGGCACCTCG TTGTTGCCGAGGAGAGCTTCCATAAATTGTAAATTGCACGAAAGTCGTTG TTAGCCGTAGGACAAGGGTTCGACTACTCTCAAGCGAAGTTGTCGGTTCC ATTACACGGTAGCGTATTTTCTGCTCCTGCTCTATGGTAGGTGATATTTA TATTACGGTGCTTGTGAAAGGCTGGCCTTCATTGTTGTGTGGCAGTGGGA TATGTACCCGTTTGGCTGCTCTAACATCCCGCCCGATCTATCATGCGCTT GACCCCCACTGCTCCCACTTTCGTCAGCTTTGTGGACACTTGCGGCGCTT CTTCACGAGCGCCCCCTCCGACACCCCCGACATGGCGTCCTTCATGGGGG TCGTCCAACAGTTGGAGGCGGACGTGCGCCAACCGTAGAAGGACGAAGAG ACATAGCAAGATACAGGGAAGAGGTTGGACAGGAGGCACGCGTGACTGGG AGCGTGCGAGGACCTTGGTGCAATGTGATAGATTGTACCTCCTCCACATT CGACGAGGGTTGAGTAGTCCCCTGCTATCGTTGTGGCTACCGAGGTGCAC TGCGAGTAGTGAAAGTATTGCAAGTACGATACCCAAGGCGGGGTGTCGAT AGTGGATTGTCGCAGATTGCAATACCATTTTTAGTTTTTGATTTTTTCGA GGGTACAATACAGGGGTGGCCCAAGGGTCTAGTGGTAAGGGTGTTCGCCT CTGTTGGCGGAAGTTGGGGGTTTGATCCCCGGTGGCACTTTTCTGTGCCA TCTTCCGTCGCGGAAAACGCGAGAGCGTGAGTAAGCACAATTCGATGATA GTCGACGACGGAAGAAAGTGACACTCTTCTCGCGACAAAAATGTAGGCAC GTACCGTAGTGGGAAGGCGGGAGGAGCGCCTACTATGTGACCCCGGATGT GAGTTACGAAGAAAGATGGAGCTAGAGAAAGAATTGGGCGAAGATAATAA ATGGGACGACAAAAAAAAAAAAAAACAATTGGGCGGTTCAGCACGCTGGC GACGATTGGAGAAAAAACATAACTCGGC
back to top

Coding sequence (CDS) from alignment at D-herbacea_M_contig916:23779..36906+

>mRNA_D-herbacea_M_contig916.15833.1 ID=mRNA_D-herbacea_M_contig916.15833.1|Name=mRNA_D-herbacea_M_contig916.15833.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=2928bp|location=Sequence derived from alignment at D-herbacea_M_contig916:23779..36906+ (Desmarestia herbacea DmunM male)
ATGTTCGGAATGCGAGCAACTCATAAGCTGGAGTCGCCCGCCAGGCCGAT
AATTTCTGCGAGACATGGAAAGCCGATAGCGGATCCGGGATGTTCGGAAT
GCGAGCAACTCATAAGCTGGAGTCGCCCGCCAGGCCGATAATTTCTGCGA
GACATGGAAAGCCGATAGCGGATCCGGGATATATCACGGGATGTCTCGTG
CGCCGTGAGCATGACTACTACGGGGCTCACCGGCAAGTGTGCGGTGTGAG
ATATATCACGGGATGTCTCGTGCGCCGTGAGCATGACTACTACGGGGCTC
ACCGGCAAGTGTGCGGTGTGAGGCGCCTTGATGTCAACCAGGTCAAAGAA
GCGGCGGCGGCCATTGTCCCAGGCGCGCAGGCGCCTTGATGTCAACCAGG
TCAAAGAAGCGGCGGCGGCCATTGTCCCAGGCGCGCAGGAGGGTTATTCG
CTTCTGCTGGGTGTGGTCATCCTTTTTGTGATGAACGCAATGTTGATCGT
TCCCCAGGCGGTGCGCAATAGGCTTGCGCAGCGTACAGCTTCAGCCAACT
TAGCTGTAGTACAGCCAGCAGAGAGGGAGGCACGTCCTGTTCCCGAATCA
GAGGAGGGTTATTCGCTTCTGCTGGGTGTGGTCATCCTTTTTGTGATGAA
CGCAATGTTGATCGTTCCCCAGGCGGTGCGCAATAGGCTTGCGCAGCGTA
CAGCTTCAGCCAACTTAGCTGTAGTACAGCCAGCAGAGAGGGAGGCACGT
CCTGTTCCCGAATCAGAGGCCCTGCGGCTTTCGTCCCCTCTACAAAACCC
GAGGACGTCGCCAGGATTGTGGGCGGCAACGGATCTTTGGAGCATGGGGG
GCCTCCAGGCAGAGTTTGTCGCAAACGTGGCCACGCTTGGGGGAGGCCCC
CGATCGCAAGCGTTGGCTCGCAGCGGCCTTGATGATAATATGTCAAGGCT
TCGGAAGTGCAGCGTACTCGGGCAGGGAGCTTTCGGAAACGTGTATCTTG
CGGAACATGAGGAGTTCGGGGACAAGTACGCGTTGAAGGTCACGAAGCCG
GCCCTGCGGCTTTCGTCCCCTCTACAAAACCCGAGGACGTCGCCAGGATT
GTGGGCGGCAACGGATCTTTGGAGCATGGGGGGCCTCCAGGCAGAGTTTG
TCGCAAACGTGGCCACGCTTGGGGGAGGCCCCCGATCGCAAGCGTTGGCT
CGCAGCGGCCTTGATGATAATATGTCAAGGCTTCGGAAGTGCAGCGTACT
CGGGCAGGGAGCTTTCGGAAACGTGTATCTTGCGGAACATGAGGAGTTCG
GGGACAAGTACGCGTTGAAGGTCACGAAGCCGAACGCGACCGACGCGGCG
TTGGCCTCAGCCGTACTGGAGATGATGGTGCTGCTTCGAACGCGACCGAC
GCGGCGTTGGCCTCAGCCGTACTGGAGATGATGGTGCTGCTTCGCATCCA
GCGCAAGTCGCACATCAATCTGGTCAGTGCTCTGGCCATCGACGACACTC
AAGTCCAGCTGCCCATCCTTCTCCCGGCGGCAGACACGGACTTTTTTCAC
GTCACCATGAAAGGCGGCTGGCCCTTGGGGGCGCAACTCACCATCCAGCG
CAAGTCGCACATCAATCTGGTCAGTGCTCTGGCCATCGACGACACTCAAG
TCCAGCTGCCCATCCTTCTCCCGGCGGCAGACACGGACTTTTTTCACGTC
ACCATGAAAGGCGGCTGGCCCTTGGGGGCGCAACTCACTCTCCTGTTGGA
TGCGGCAAAAGGTGTAAGCCACCTCCACGAGGAGCTGGGCGTGGTCCACA
TGGACCTCAAATTCGGGAATATTCTGGTGTACAACTCCCCGTACCCGCAC
GCCAAAGTGGCCGACTTTGGCCACACTCGAGTCTCCTGTTGGATGCGGCA
AAAGGTGTAAGCCACCTCCACGAGGAGCTGGGCGTGGTCCACATGGACCT
CAAATTCGGGAATATTCTGGTGTACAACTCCCCGTACCCGCACGCCAAAG
TGGCCGACTTTGGCCACACTCGAGAGATTGGAGAGCGGTGTCACGGCATG
TTGGGGACGTTGGGGTTTGTGTCACTGGAGGTGCTGACGGGGTCATATGT
TGCGCGGCCGGGGCTGGACGTGTTCTCGTTGGCCACGATGCTCTTGATGA
TGTGCAGCAAAGATGGCCGCAATGGCTGCATATTCGTGCACCCGAGATTG
GAGAGCGGTGTCACGGCATGTTGGGGACGTTGGGGTTTGTGTCACTGGAG
GTGCTGACGGGGTCATATGTTGCGCGGCCGGGGCTGGACGTGTTCTCGTT
GGCCACGATGCTCTTGATGATGTGCAGCAAAGATGGCCGCAATGGCTGCA
TATTCGTGCACCCGCTCATTACGACCGCCGAGGAGAAGAGGATGCTGGAT
GACCTCCTGCCTAACCGTCCACCTGGTTGTGATTTCATGCTCATTACGAC
CGCCGAGGAGAAGAGGATGCTGGATGACCTCCTGCCTAACCGTCCACCTG
GTTGTGATTTCATGGCACAGTTGATGAGGAGGGTCTTCGACGACGGGACG
TTCGCGGCAAAGGTGCTCGTGCCGGAGATGATGTACGAGGTGATCCGGTC
GCCCGACGTGGCACAGTTGATGAGGAGGGTCTTCGACGACGGGACGTTCG
CGGCAAAGGTGCTCGTGCCGGAGATGATGTACGAGGTGATCCGGTCGCCC
GACGTGCTTTGTGGACACTTGCGGCGCTTCTTCACGAGCGCCCCCTCCGA
CACCCCCGACATGGCGTCCTTCATGGGGGTCGTCCAACAGTTGGAGGCGG
ACGTGCGCCAACCGTAGCTTTGTGGACACTTGCGGCGCTTCTTCACGAGC
GCCCCCTCCGACACCCCCGACATGGCGTCCTTCATGGGGGTCGTCCAACA
GTTGGAGGCGGACGTGCGCCAACCGTAG
back to top