mRNA_D-herbacea_M_contig9.15706.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig9.15706.1
Unique NamemRNA_D-herbacea_M_contig9.15706.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
BLAST of mRNA_D-herbacea_M_contig9.15706.1 vs. uniprot
Match: A0A6H5JW83_9PHAE (MMtag domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW83_9PHAE)

HSP 1 Score: 314 bits (805), Expect = 6.090e-98
Identity = 168/209 (80.38%), Postives = 180/209 (86.12%), Query Frame = 2
Query:   77 MGDKRYRVGGTRGGQDQFKWDDVKSDVHRENYLGHSLLAPVGRWQRGKDLKWWNKKGSQG-DSARVQAEMEKARLKQLDEDLLNEALGLAPRQARTQQSELSTADRKQLLEKGATADRDGADTERVSGLGAGPAKLHEHIPTLTLKERELERLKRERERKEGGLTEASLVEIVDYDKEKQDVAAAAEA-----------SRARLREEKR 667
            MGDKRYRVGGTRGGQDQFKW+DVK DVHRENYLGHSLLAPVGRWQRGKDLKWWNKKG  G D+AR QAEMEKAR+KQLDEDLLNEALGLAPR+ RTQQ ELS AD+KQLLEKG T D DG DTER+SGLGAGPAKLHEHIP+LTLKERELERLKRERERKEGGLTE SLVEIVDY+KE++D+AA   A           SR  L+EEKR
Sbjct:    1 MGDKRYRVGGTRGGQDQFKWEDVKGDVHRENYLGHSLLAPVGRWQRGKDLKWWNKKGEGGADAARAQAEMEKARVKQLDEDLLNEALGLAPRKVRTQQLELSKADKKQLLEKGNTVDGDGMDTERISGLGAGPAKLHEHIPSLTLKERELERLKRERERKEGGLTEESLVEIVDYEKEQRDLAAVKAAANPGVAVSGGSSRKSLKEEKR 209          
BLAST of mRNA_D-herbacea_M_contig9.15706.1 vs. uniprot
Match: D8LC81_ECTSI (MMtag domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC81_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 2.190e-88
Identity = 141/160 (88.12%), Postives = 148/160 (92.50%), Query Frame = 2
Query:   77 MGDKRYRVGGTRGGQDQFKWDDVKSDVHRENYLGHSLLAPVGRWQRGKDLKWWNKKGSQG-DSARVQAEMEKARLKQLDEDLLNEALGLAPRQARTQQSELSTADRKQLLEKGATADRDGADTERVSGLGAGPAKLHEHIPTLTLKERELERLKRERERK 553
            MGDKRYRVGGTRGGQDQFKW+DVK DVHRENYLGHSLLAPVGRWQRGKDLKWWNKKG  G D+AR QAEMEKAR+KQLDEDLLNEALGLAPR+ RTQQ ELS AD+KQLLEKG T D DG DTERVSGLGAGPAKLHEHIP+LTLKERELERLKRERER+
Sbjct:    1 MGDKRYRVGGTRGGQDQFKWEDVKGDVHRENYLGHSLLAPVGRWQRGKDLKWWNKKGEGGADAARAQAEMEKARVKQLDEDLLNEALGLAPRKVRTQQLELSKADKKQLLEKGTTVDGDGMDTERVSGLGAGPAKLHEHIPSLTLKERELERLKRERERR 160          
BLAST of mRNA_D-herbacea_M_contig9.15706.1 vs. uniprot
Match: G4YNR6_PHYSP (MMtag domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YNR6_PHYSP)

HSP 1 Score: 149 bits (377), Expect = 1.270e-39
Identity = 81/149 (54.36%), Postives = 102/149 (68.46%), Query Frame = 2
Query:   77 MGDKRYRVGGTRGGQDQFKWDDVKSDVHRENYLGHSLLAPVGRWQRGKDLKWWNKKGSQGDSARVQAEMEKARLKQLDEDLLNEALGLAPRQARTQQSELSTADRKQLLEKGATADRDGADTERVSGLGAGPAKLHEHI--PTLTLKER 517
             G   YRVGGTRGG DQFKW+DVK+D +RENYLGHS+ APVGRWQ+GKDL W+ K      +  +QAE+  A  KQ DEDL+NEALG+AP++       LS ++ K+LL++G  A+RDG D ERV GLGA P +    +  P  TL ER
Sbjct:    3 FGKTNYRVGGTRGGADQFKWEDVKNDKYRENYLGHSVQAPVGRWQKGKDLTWYAKTNKSQRAEALQAEL--ALAKQRDEDLMNEALGIAPKRRHEPAEGLSASEMKELLKRG-EAERDGMDVERVEGLGAAPVEAAGFVTAPKRTLAER 148          
BLAST of mRNA_D-herbacea_M_contig9.15706.1 vs. uniprot
Match: A0A2P4XPU4_9STRA (T-complex protein 1 subunit zeta n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPU4_9STRA)

HSP 1 Score: 150 bits (379), Expect = 4.540e-39
Identity = 81/149 (54.36%), Postives = 103/149 (69.13%), Query Frame = 2
Query:   77 MGDKRYRVGGTRGGQDQFKWDDVKSDVHRENYLGHSLLAPVGRWQRGKDLKWWNKKGSQGDSARVQAEMEKARLKQLDEDLLNEALGLAPRQARTQQSELSTADRKQLLEKGATADRDGADTERVSGLGAGPAKLH--EHIPTLTLKER 517
             G   YR+GGTRGG DQFKW+DVK+D +RENYLGHS+ APVGRWQ+GKDL W+ K      +  +QAE+  A  KQ DEDL+NEALG+AP++    +  LS ++ K+LL++G  A+RDG D ERV GLGA P +    E  P  TL ER
Sbjct:    3 FGKTNYRIGGTRGGADQFKWEDVKNDKYRENYLGHSVQAPVGRWQKGKDLTWYAKANKSQRAEALQAEL--ALAKQRDEDLMNEALGIAPKKRHEPREGLSASEMKELLKRG-EAERDGMDVERVEGLGAAPVEAEGFETGPKRTLAER 148          
BLAST of mRNA_D-herbacea_M_contig9.15706.1 vs. uniprot
Match: A0A833SQH9_PHYIN (Multiple myeloma tumor-associated n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SQH9_PHYIN)

HSP 1 Score: 153 bits (386), Expect = 5.580e-39
Identity = 83/149 (55.70%), Postives = 105/149 (70.47%), Query Frame = 2
Query:   77 MGDKRYRVGGTRGGQDQFKWDDVKSDVHRENYLGHSLLAPVGRWQRGKDLKWWNKKGSQGDSARVQAEMEKARLKQLDEDLLNEALGLAPRQARTQQSELSTADRKQLLEKGATADRDGADTERVSGLGAGPAKLH--EHIPTLTLKER 517
             G   YRVGGTRGG DQFKW+DVK+D +RENYLGHS+ APVGRWQ+GKDL W+ K      +  +Q+E+E A  KQ DEDL+NEALG+AP++ R     LS+++ K+LL++G  A+RDG D ERV GLGA P +    E  P  TL ER
Sbjct:    3 FGKTNYRVGGTRGGADQFKWEDVKNDKYRENYLGHSVQAPVGRWQKGKDLTWYAKANKSQRAEALQSELELA--KQRDEDLMNEALGIAPKKRREPVEALSSSEMKELLKRG-EAERDGLDVERVEGLGAAPVEAEGFETGPKRTLAER 148          
BLAST of mRNA_D-herbacea_M_contig9.15706.1 vs. uniprot
Match: W2QYV0_PHYPN (MMtag domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QYV0_PHYPN)

HSP 1 Score: 153 bits (386), Expect = 8.050e-39
Identity = 84/149 (56.38%), Postives = 103/149 (69.13%), Query Frame = 2
Query:   77 MGDKRYRVGGTRGGQDQFKWDDVKSDVHRENYLGHSLLAPVGRWQRGKDLKWWNKKGSQGDSARVQAEMEKARLKQLDEDLLNEALGLAPRQARTQQSELSTADRKQLLEKGATADRDGADTERVSGLGAGPAKLH--EHIPTLTLKER 517
             G   YRVGGTRGG DQFKW+DVK+D +RENYLGHS+ APVGRWQ+GKDL W+ K      +  +QAE+  A  KQ DEDL+NEALG+APR+ R     LS ++ K+LL++G  A+RDG D ERV GLGA P +    E  P  TL ER
Sbjct:    3 FGKTNYRVGGTRGGADQFKWEDVKNDKYRENYLGHSVQAPVGRWQKGKDLTWYAKANKSQRAEALQAEL--ALAKQRDEDLMNEALGIAPRKRREPAEGLSASEMKELLKRG-EAERDGMDVERVEGLGAAPVEAEGFETGPKRTLAER 148          
BLAST of mRNA_D-herbacea_M_contig9.15706.1 vs. uniprot
Match: A0A080Z914_PHYPR (MMtag domain-containing protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A080Z914_PHYPR)

HSP 1 Score: 152 bits (384), Expect = 1.560e-38
Identity = 84/149 (56.38%), Postives = 103/149 (69.13%), Query Frame = 2
Query:   77 MGDKRYRVGGTRGGQDQFKWDDVKSDVHRENYLGHSLLAPVGRWQRGKDLKWWNKKGSQGDSARVQAEMEKARLKQLDEDLLNEALGLAPRQARTQQSELSTADRKQLLEKGATADRDGADTERVSGLGAGPAKLH--EHIPTLTLKER 517
             G   YRVGGTRGG DQFKW+DVK+D +RENYLGHS+ APVGRWQ+GKDL W+ K      +  +QAE+  A  KQ DEDL+NEALG+APR+ R     LS ++ K+LL++G  A+RDG D ERV GLGA P +    E  P  TL ER
Sbjct:    3 FGKTNYRVGGTRGGADQFKWEDVKNDKYRENYLGHSVQAPVGRWQKGKDLTWYAKANKLQRAEALQAEL--ALAKQRDEDLMNEALGIAPRKRREPAEGLSASEMKELLKRG-EAERDGMDVERVEGLGAAPVEAEGFETGPKRTLAER 148          
BLAST of mRNA_D-herbacea_M_contig9.15706.1 vs. uniprot
Match: A0A3R7J9M4_9STRA (MMtag domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J9M4_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.400e-38
Identity = 81/154 (52.60%), Postives = 105/154 (68.18%), Query Frame = 2
Query:   77 MGDKRYRVGGTRGGQDQFKWDDVKSDVHRENYLGHSLLAPVGRWQRGKDLKWWNKKGSQGDSARVQAEMEKARLKQLDEDLLNEALGLAPRQARTQQSELSTADRKQLLEKGATADRDGADTERVSGLGAGPAKL--HEHIPTLTLKERELERL 532
             G   YRVGGTRGG DQFKW+DVK+D +RENYLGHS+ APVGRWQ+GKDL W+ K      +  +Q+E+  A  KQ DED++NEALG+AP++       LS ++ K+LL++G  A+RDG D ER+ GLGA P +    E  P  TL ER  +RL
Sbjct:    3 FGKTNYRVGGTRGGADQFKWEDVKNDKYRENYLGHSVQAPVGRWQKGKDLTWYAKASKTERAKALQSEL--AMAKQRDEDIMNEALGIAPKRRHEPVEGLSASEMKELLKRG-EAERDGMDVERIEGLGAAPVEAAGFEMGPKRTLAERYKDRL 153          
BLAST of mRNA_D-herbacea_M_contig9.15706.1 vs. uniprot
Match: A0A2P4XTN7_9STRA (T-complex protein 1 subunit zeta n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XTN7_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.390e-38
Identity = 82/149 (55.03%), Postives = 104/149 (69.80%), Query Frame = 2
Query:   77 MGDKRYRVGGTRGGQDQFKWDDVKSDVHRENYLGHSLLAPVGRWQRGKDLKWWNKKGSQGDSARVQAEMEKARLKQLDEDLLNEALGLAPRQARTQQSELSTADRKQLLEKGATADRDGADTERVSGLGAGPAKLH--EHIPTLTLKER 517
             G   YR+GGTRGG DQFKW+DVK+D +RENYLGHS+ APVGRWQ+GKDL W+ K      +  +QAE+  A  KQ DEDL+NEALG+AP++    +  LST++ K+LL++G  A+RDG D ERV GLGA P +    E  P  TL ER
Sbjct:    3 FGKTNYRIGGTRGGADQFKWEDVKNDKYRENYLGHSVQAPVGRWQKGKDLTWYAKANKLQRAEALQAEL--ALAKQRDEDLMNEALGIAPKKRHEPREGLSTSEMKELLKRG-EAERDGMDVERVEGLGAAPVEAEGFEMGPKRTLAER 148          
BLAST of mRNA_D-herbacea_M_contig9.15706.1 vs. uniprot
Match: A0A8J5IZW4_9STRA (MMtag domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IZW4_9STRA)

HSP 1 Score: 149 bits (377), Expect = 5.100e-38
Identity = 84/154 (54.55%), Postives = 105/154 (68.18%), Query Frame = 2
Query:   77 MGDKRYRVGGTRGGQDQFKWDDVKSDVHRENYLGHSLLAPVGRWQRGKDLKWWNKKGSQGDSARVQAEMEKARLKQLDEDLLNEALGLAPRQARTQQSELSTADRKQLLEKGATADRDGADTERVSGLGAGPAKLH--EHIPTLTLKERELERL 532
             G   YRVGGTRGG DQFKW+DVK+D +RENYLGHS+ APVGRWQ+GKDL W+ K      +  +QAE+  A  KQ DEDL+NEALG+AP++ R     LS ++ K+LL++G  A+RDG D ERV GLGA P +    E     TL ER  E+L
Sbjct:    3 FGKTNYRVGGTRGGADQFKWEDVKNDKYRENYLGHSVQAPVGRWQKGKDLTWYAKANKSQRAEALQAEL--ALAKQRDEDLMNEALGIAPKKRREPVEGLSASEMKELLKRG-EAERDGMDVERVEGLGAAPVEAEGFEMGSKRTLAERYKEQL 153          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig9.15706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JW83_9PHAE6.090e-9880.38MMtag domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LC81_ECTSI2.190e-8888.13MMtag domain-containing protein n=1 Tax=Ectocarpus... [more]
G4YNR6_PHYSP1.270e-3954.36MMtag domain-containing protein n=1 Tax=Phytophtho... [more]
A0A2P4XPU4_9STRA4.540e-3954.36T-complex protein 1 subunit zeta n=1 Tax=Phytophth... [more]
A0A833SQH9_PHYIN5.580e-3955.70Multiple myeloma tumor-associated n=1 Tax=Phytopht... [more]
W2QYV0_PHYPN8.050e-3956.38MMtag domain-containing protein n=10 Tax=Phytophth... [more]
A0A080Z914_PHYPR1.560e-3856.38MMtag domain-containing protein n=1 Tax=Phytophtho... [more]
A0A3R7J9M4_9STRA2.400e-3852.60MMtag domain-containing protein n=3 Tax=Phytophtho... [more]
A0A2P4XTN7_9STRA3.390e-3855.03T-complex protein 1 subunit zeta n=1 Tax=Phytophth... [more]
A0A8J5IZW4_9STRA5.100e-3854.55MMtag domain-containing protein n=1 Tax=Phytophtho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig9contigD-herbacea_M_contig9:2427892..2431466 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score280.4
Seed ortholog evalue1.4e-72
Seed eggNOG ortholog2880.D8LC81
Preferred nameC1orf35
KEGG koko:K09498,ko:K15362
KEGG Pathwayko03440,ko03460,map03440,map03460
Hectar predicted targeting categoryother localisation
GOsGO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0006810,GO:0006887,GO:0006955,GO:0008150,GO:0009987,GO:0012505,GO:0016192,GO:0030141,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0034774,GO:0036230,GO:0042119,GO:0043226,GO:0043227,GO:0043229,GO:0043233,GO:0043299,GO:0043312,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0097708,GO:0099503,GO:0101002,GO:1904813
EggNOG free text desc.Kinase phosphorylation protein
EggNOG OGsKOG4520@1,KOG4520@2759
Ec32 ortholog descriptionKinase phosphorylation domain
Ec32 orthologEc-20_004770.1
EC3.6.4.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03110,ko03400,ko04147
Exons5
Model size1467
Cds size1290
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935701.387339-UTR-D-herbacea_M_contig9:2427891..24279921622935701.387339-UTR-D-herbacea_M_contig9:2427891..2427992Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig9 2427892..2427992 -
1690880664.6919723-UTR-D-herbacea_M_contig9:2427891..24279921690880664.6919723-UTR-D-herbacea_M_contig9:2427891..2427992Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig9 2427892..2427992 -
1622935701.5324554-UTR-D-herbacea_M_contig9:2431390..24314661622935701.5324554-UTR-D-herbacea_M_contig9:2431390..2431466Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig9 2431391..2431466 -
1690880664.78086-UTR-D-herbacea_M_contig9:2431390..24314661690880664.78086-UTR-D-herbacea_M_contig9:2431390..2431466Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig9 2431391..2431466 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935701.4148006-CDS-D-herbacea_M_contig9:2427992..24287891622935701.4148006-CDS-D-herbacea_M_contig9:2427992..2428789Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2427993..2428789 -
1690880664.7112381-CDS-D-herbacea_M_contig9:2427992..24287891690880664.7112381-CDS-D-herbacea_M_contig9:2427992..2428789Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2427993..2428789 -
1622935701.4378805-CDS-D-herbacea_M_contig9:2429158..24292561622935701.4378805-CDS-D-herbacea_M_contig9:2429158..2429256Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2429159..2429256 -
1690880664.7245612-CDS-D-herbacea_M_contig9:2429158..24292561690880664.7245612-CDS-D-herbacea_M_contig9:2429158..2429256Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2429159..2429256 -
1622935701.46575-CDS-D-herbacea_M_contig9:2429513..24296511622935701.46575-CDS-D-herbacea_M_contig9:2429513..2429651Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2429514..2429651 -
1690880664.7395535-CDS-D-herbacea_M_contig9:2429513..24296511690880664.7395535-CDS-D-herbacea_M_contig9:2429513..2429651Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2429514..2429651 -
1622935701.4875445-CDS-D-herbacea_M_contig9:2430696..24308141622935701.4875445-CDS-D-herbacea_M_contig9:2430696..2430814Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2430697..2430814 -
1690880664.7548742-CDS-D-herbacea_M_contig9:2430696..24308141690880664.7548742-CDS-D-herbacea_M_contig9:2430696..2430814Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2430697..2430814 -
1622935701.5104043-CDS-D-herbacea_M_contig9:2431251..24313901622935701.5104043-CDS-D-herbacea_M_contig9:2431251..2431390Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2431252..2431390 -
1690880664.7672074-CDS-D-herbacea_M_contig9:2431251..24313901690880664.7672074-CDS-D-herbacea_M_contig9:2431251..2431390Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2431252..2431390 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig9.15706.1prot_D-herbacea_M_contig9.15706.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig9 2427993..2431390 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig9.15706.1

>prot_D-herbacea_M_contig9.15706.1 ID=prot_D-herbacea_M_contig9.15706.1|Name=mRNA_D-herbacea_M_contig9.15706.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=430bp
MGDKRYRVGGTRGGQDQFKWDDVKSDVHRENYLGHSLLAPVGRWQRGKDL
KWWNKKGSQGDSARVQAEMEKARLKQLDEDLLNEALGLAPRQARTQQSEL
STADRKQLLEKGATADRDGADTERVSGLGAGPAKLHEHIPTLTLKERELE
RLKRERERKEGGLTEASLVEIVDYDKEKQDVAAAAEASRARLREEKRSKK
LEKREKKRAKKEKKKKKRERRKGSRRLRQTNAPRLRKNLTVSSVTVAWTT
EAVVSKGVTSAVTRTTARVVALGMARPSEVYVRREAGEMAADRSALAVGR
PAGRGAIATAGATETHEITRAKVTLLVGAEEGLGRAGDGVRDSRRRAREA
GALPLAERDRMAKGGGGTREIGMVRGTLEGSKTRVQQGNAMAGTGVRRRG
RGEAGQQVAAAVAVTVVAATAAAAVIQLL*
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mRNA from alignment at D-herbacea_M_contig9:2427892..2431466-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig9.15706.1 ID=mRNA_D-herbacea_M_contig9.15706.1|Name=mRNA_D-herbacea_M_contig9.15706.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=3575bp|location=Sequence derived from alignment at D-herbacea_M_contig9:2427892..2431466- (Desmarestia herbacea DmunM male)
GAAACGCTGAGGCGCGTTATATTTGGCGATAGTACGTGACAACGGTGAGC CCAGCTTCGACGGGGCGCCAGGAGACATGGGAGACAAGAGATACCGCGTG GGTGGCACTCGAGGTGGTCAAGATCAATTCAAATGGGACGACGTTAAGAG CGATGTTCACCGGGAAAACTATCTTGGTCATTCTCTGTTGGCGCCTGTGG GTCGATGGCAGAGAGGTGAGTGAATGAACGTCGTTTGTACGTAGGGTCCG GTGTAAGGGACCTTGGCGGACGGGTTGAGGAAATGCCCATCCACTATAGC TTGTCTTGGCAAGTACATATCATTATGCTTACCTTTTCGATAGTTAGTGC AGTCTGTCGGAGTCAAAGATATTCCAGCCCTACACCGACATGTGATTGTT TTCGATTGGCACTTGCTTTCCCCAAGGTTTCACTATGTATGGTATTCAAG ATGCGTTCACTCCTTAGGCCCTGTACTACAGCACATGCATTGTGCCCTCC GGTACTTTACAGCACCAGCGGCCAGTGTGTATTGCGGCACGGTTATGGTT CTAGCAGGGCCTGCCTTCCATTTATTTGTTTGGCAGACAATTCGATTACA TTTCTGGCGGTGATATTCGTCGTCGTCTTGTTGTGTCTGCGCGTGCGTTC AGGTAAGGACCTCAAGTGGTGGAATAAGAAAGGGTCACAGGGAGACTCCG CTCGCGTCCAAGCCGAGATGGAGAAGGCCCGATTGAAGCAGTTAGACGAG GACCTCCTCAACGAAGCTCTGTAAGTCCAGTTCGACTGTACTCTAGCGTA CTGTTTACGTCTTCATACGAGGCTCTGCTGCTTGAAAGCGTGCATCGTTT TTTTCACAGGCACTGCTACGAGTACGAGTACGAGTATAGCGTACGAGTAG CATACTCGTAAAATTGTACGGATGTTTTGTTGAGAGTACTATGATACTAC TACTACTGTCTGTGTACAAGTAGTGCAGAAAACGAAGACAGCTGCGTGTA CGAGTACAACAATACGTAGCCAGCAGCAGGAGCAGTTCTGGAGCATCTTG AGCAAACTAGGCTTCCAATTTTACTAATTTGCTCAACAAAACAGGGATCC TCCGAGGGCATGGTTTGGGGCCCGGGTTTTGGTCACGCTTTGGTCCAGCT TTTGCCGACGTTCCTTATGCGGTAGGCATTGAAACGGGACTGTCAGAAAA CCAACCAATGGCAACATGGCCACACAACACACACAACACGACCCAACAGG ACAAACGTTAAAATTCAAAAACGATACAACATAGACCACAACCCAACTCA CTACAACTCAACAGCACACCGCTCAACGCCACACAACACAACAGCACTAC ACGACACAACCCAGCAACCCAACCCAACCCAACCCAATCTGGACGCGCTT ATCCCAAAGGTATTATGATATGACTTAAGATTTTAACAACAGGACTCGTA GTAGTCAGTGGTATGTACCATATCAATACTTGTCATGAAATAGTCAGATA GAGAGTACAATATGTAGTCCTGGGCGACCTGCCCCCGGGAGGACGTGGGG TAAGAATGTTTTGCCTGCAGCTTGCTCGGTGGTTGCTGCATGCGTTCTTC TGTTCTTCTCGATGGGTAGTCGGTTGGTAGTCGGCCAGGAGGTCTTCCCG AGGCCGCCGTCGTCGCACGTGTTGTTTTTATGAATGTATCCGTGTTGCCG CGTTCGAATTAGAGCTATGTAGTAAGCGCGAATAGTGTAATGCGCTGCCT TCGAGAATGAATGCGCCGACCGTCTCACCTTTGCCCCCTACGGTCCCCCC AATGCACGCCCTCAGTGGTCTCGCCCCAAGGCAGGCCCGCACCCAGCAAT CGGAGCTGAGCACGGCGGACAGGAAACAGCTGTTGGAGAAGGGGGCCACG GCAGACCGGGACGGCGCGGACACAGAGCGGGTGTCCGGGCTCGGGGCAGG ACCGTAAGTGCCAAGCTCCTCGATCTCTACCCGCGATACCGGTGCTGACA TGAGCGCTGCCGTTCGATCTGTATCGAGTTACTAAGCTGTTGATCTCGCT CCCAACATGGTCCCACTGCGCGTTCACAGACTCGCCTCGGCACCGTGGCA AGATCGAGAGTGTTTAGTCGATGTGCTTTGCATTCAAATATTATTTTCTT GGCACACCTTGACGTAATTCTGACACGTTGTTGTTATTGTTGTTGTTGTT GTGTCTTCAGGGCTAAGCTTCACGAGCACATTCCGACTCTAACGCTAAAA GAGCGGGAGCTGGAGAGGCTCAAGCGGGAGAGAGAACGTAAAGAAGGTGG CCTCACAGGTGAGCAAGCACGTAGTTTCCGGTGATGCTGCCTGTACCCAG GACATACACGAATCAAATGGACCATATACGTCATGTACGGTCGCTCAAGG CTTGTTGTCAATCGCTTGCGTTGTTTGCGCCTATTCTACGGCGGACAGAA AGTCGCCGCTGGTTTAAAGGTACTCTTGTACGGCGGCTTGGTGCAGGCCA TATTCCTTTATCGCCAGAAAAACAAGCCGTACGTGGAGGCTGTCAATACC GTGTTTTCGGAGCGCCTAATCGGTTCCCTCTTGGGTGCAGAAACCCTATC CTTGTCACCGCAATTCAACGATCATCGTTTTTGACTGGTACGGCTCGATG CGCCACCCATTTGTGTTACCGCTGCAGAGGCGAGCTTGGTGGAAATTGTG GACTACGATAAAGAAAAGCAAGATGTAGCGGCGGCGGCGGAGGCCAGCCG TGCTCGCCTGCGCGAAGAAAAACGCTCGAAAAAGCTGGAGAAGAGAGAAA AGAAGCGCGCTAAGAAGGAGAAAAAAAAAAAAAAAAGAGAGAGAAGAAAA GGCTCAAGAAGGCTAAGGCAAACGAACGCGCCCCGCCTGCGGAAAAATTT AACCGTGAGTTCCGTGACGGTGGCGTGGACAACCGAGGCGGTCGTGTCGA AGGGCGTGACGTCGGCGGTAACACGGACAACCGCAAGGGTGGTAGCCCTG GGTATGGCTCGTCCTTCCGAGGTGTACGTGAGGAGAGAGGCCGGGGAGAT GGCGGCAGACAGGTCAGCTCTCGCGGTAGGGCGGCCAGCGGGGAGGGGGG CTATCGCAACAGCCGGGGCAACGGAGACCCACGAGATAACGAGAGCAAAG GTGACGCTGCTGGTTGGAGCAGAAGAGGGCCTGGGGAGAGCGGGAGACGG CGTGAGAGACTCCCGGCGACGCGCTCGCGAAGCAGGAGCCCTCCCACTAG CAGAGAGAGACAGAATGGCAAAAGGGGGCGGTGGGACTCGCGAGATCGGC ATGGTGAGAGGAACCCTCGAAGGGTCGAAGACTCGGGTGCAGCAAGGGAA CGCGATGGCCGGAACTGGGGTGAGGAGAAGAGGCCGCGGAGAAGCCGGTC AGCAAGTAGCAGCAGCAGTAGCAGTGACAGTAGTAGCAGCGACAGCAGCA GCGGCGGTCATTCAGCTACTATGAATAGTCGCAGCCGTGACGACAGGGGG GGTCGCAGACTTGGCGCGAGTCGCGGCTTTGGTACATCTCGGAGTGGAGC GGGCGGCGGCCGGAGTCGATCGCCG
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Coding sequence (CDS) from alignment at D-herbacea_M_contig9:2427892..2431466-

>mRNA_D-herbacea_M_contig9.15706.1 ID=mRNA_D-herbacea_M_contig9.15706.1|Name=mRNA_D-herbacea_M_contig9.15706.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=2580bp|location=Sequence derived from alignment at D-herbacea_M_contig9:2427892..2431466- (Desmarestia herbacea DmunM male)
ATGGGAGACAAGAGATACCGCGTGGGTGGCACTCGAGGTGGTCAAGATCA
ATTCAAATGGGACGACGTTAAGAGCGATGTTCACCGGGAAAACTATCTTG
GTCATTCTCTGTTGGCGCCTGTGGGTCGATGGCAGAGAGATGGGAGACAA
GAGATACCGCGTGGGTGGCACTCGAGGTGGTCAAGATCAATTCAAATGGG
ACGACGTTAAGAGCGATGTTCACCGGGAAAACTATCTTGGTCATTCTCTG
TTGGCGCCTGTGGGTCGATGGCAGAGAGGTAAGGACCTCAAGTGGTGGAA
TAAGAAAGGGTCACAGGGAGACTCCGCTCGCGTCCAAGCCGAGATGGAGA
AGGCCCGATTGAAGCAGTTAGACGAGGACCTCCTCAACGAAGCTCTGTAA
GGACCTCAAGTGGTGGAATAAGAAAGGGTCACAGGGAGACTCCGCTCGCG
TCCAAGCCGAGATGGAGAAGGCCCGATTGAAGCAGTTAGACGAGGACCTC
CTCAACGAAGCTCTTGGTCTCGCCCCAAGGCAGGCCCGCACCCAGCAATC
GGAGCTGAGCACGGCGGACAGGAAACAGCTGTTGGAGAAGGGGGCCACGG
CAGACCGGGACGGCGCGGACACAGAGCGGGTGTCCGGGCTCGGGGCAGGA
CCTGGTCTCGCCCCAAGGCAGGCCCGCACCCAGCAATCGGAGCTGAGCAC
GGCGGACAGGAAACAGCTGTTGGAGAAGGGGGCCACGGCAGACCGGGACG
GCGCGGACACAGAGCGGGTGTCCGGGCTCGGGGCAGGACCGGCTAAGCTT
CACGAGCACATTCCGACTCTAACGCTAAAAGAGCGGGAGCTGGAGAGGCT
CAAGCGGGAGAGAGAACGTAAAGAAGGTGGCCTCACAGGGCTAAGCTTCA
CGAGCACATTCCGACTCTAACGCTAAAAGAGCGGGAGCTGGAGAGGCTCA
AGCGGGAGAGAGAACGTAAAGAAGGTGGCCTCACAGAGGCGAGCTTGGTG
GAAATTGTGGACTACGATAAAGAAAAGCAAGATGTAGCGGCGGCGGCGGA
GGCCAGCCGTGCTCGCCTGCGCGAAGAAAAACGCTCGAAAAAGCTGGAGA
AGAGAGAAAAGAAGCGCGCTAAGAAGGAGAAAAAAAAAAAAAAAAGAGAG
AGAAGAAAAGGCTCAAGAAGGCTAAGGCAAACGAACGCGCCCCGCCTGCG
GAAAAATTTAACCGTGAGTTCCGTGACGGTGGCGTGGACAACCGAGGCGG
TCGTGTCGAAGGGCGTGACGTCGGCGGTAACACGGACAACCGCAAGGGTG
GTAGCCCTGGGTATGGCTCGTCCTTCCGAGGTGTACGTGAGGAGAGAGGC
CGGGGAGATGGCGGCAGACAGGTCAGCTCTCGCGGTAGGGCGGCCAGCGG
GGAGGGGGGCTATCGCAACAGCCGGGGCAACGGAGACCCACGAGATAACG
AGAGCAAAGGTGACGCTGCTGGTTGGAGCAGAAGAGGGCCTGGGGAGAGC
GGGAGACGGCGTGAGAGACTCCCGGCGACGCGCTCGCGAAGCAGGAGCCC
TCCCACTAGCAGAGAGAGACAGAATGGCAAAAGGGGGCGGTGGGACTCGC
GAGATCGGCATGGTGAGAGGAACCCTCGAAGGGTCGAAGACTCGGGTGCA
GCAAGGGAACGCGATGGCCGGAACTGGGGTGAGGAGAAGAGGCCGCGGAG
AAGCCGGTCAGCAAGTAGCAGCAGCAGTAGCAGTGACAGTAGTAGCAGCG
ACAGCAGCAGCGGCGGTCATTCAGCTACTATGAAGGCGAGCTTGGTGGAA
ATTGTGGACTACGATAAAGAAAAGCAAGATGTAGCGGCGGCGGCGGAGGC
CAGCCGTGCTCGCCTGCGCGAAGAAAAACGCTCGAAAAAGCTGGAGAAGA
GAGAAAAGAAGCGCGCTAAGAAGGAGAAAAAAAAAAAAAAAAGAGAGAGA
AGAAAAGGCTCAAGAAGGCTAAGGCAAACGAACGCGCCCCGCCTGCGGAA
AAATTTAACCGTGAGTTCCGTGACGGTGGCGTGGACAACCGAGGCGGTCG
TGTCGAAGGGCGTGACGTCGGCGGTAACACGGACAACCGCAAGGGTGGTA
GCCCTGGGTATGGCTCGTCCTTCCGAGGTGTACGTGAGGAGAGAGGCCGG
GGAGATGGCGGCAGACAGGTCAGCTCTCGCGGTAGGGCGGCCAGCGGGGA
GGGGGGCTATCGCAACAGCCGGGGCAACGGAGACCCACGAGATAACGAGA
GCAAAGGTGACGCTGCTGGTTGGAGCAGAAGAGGGCCTGGGGAGAGCGGG
AGACGGCGTGAGAGACTCCCGGCGACGCGCTCGCGAAGCAGGAGCCCTCC
CACTAGCAGAGAGAGACAGAATGGCAAAAGGGGGCGGTGGGACTCGCGAG
ATCGGCATGGTGAGAGGAACCCTCGAAGGGTCGAAGACTCGGGTGCAGCA
AGGGAACGCGATGGCCGGAACTGGGGTGAGGAGAAGAGGCCGCGGAGAAG
CCGGTCAGCAAGTAGCAGCAGCAGTAGCAGTGACAGTAGTAGCAGCGACA
GCAGCAGCGGCGGTCATTCAGCTACTATGA
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