mRNA_D-herbacea_M_contig9.15701.1 (mRNA) Desmarestia herbacea DmunM male
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Overview
Homology
BLAST of mRNA_D-herbacea_M_contig9.15701.1 vs. uniprot
Match: D8LC77_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC77_ECTSI) HSP 1 Score: 303 bits (777), Expect = 3.500e-94 Identity = 181/337 (53.71%), Postives = 225/337 (66.77%), Query Frame = 2
Query: 284 WGDGRAGMKHEGPSLLEKMTAEAMAAREEKTEATRKEHRKDTKKGFGGGLKKGFLMQKSSATGAASQKSRKGDRETKPSLDAISTSSSSSGAAPLPAGEARDTMPVISGRRSQTGGLDFDVSAKTADDAG--LILPEVQEALKQSTDSAAAAGGDVGGVGNTGEWLTPELLDKISRKPRMAAMLNDPRFAKAMQLMAKSPKEALGMFASNPEARDSFTELMALLAEHFKGMGVAADREREAQEAERKRVQEGPLAREALRRAAEGXXXXXXXXXXXXXXXXXXXXXXXXLRELLMDPCMQRILQECGDPAALARYMRHPEYGPKLQLMARAGLVSFR 1288
WG K +GPSL+E+M AEAMAA+E K++ R E +D K+ FGGGLKKGFL + + T +S STS GA P E ++PVI+GR++ +GGL+FDVSA+ + L+LPEVQEA+K S + GG GG G EWLTPELL KIS KPR+AAML DPRF+KAM+LM+ SPK+ALGMF S+ EAR+SFTELM+LL++HF MG AAD + A+EA+R+RV +GPLA+EALRRAAEG LRELLMDP MQR+LQECG+P LARYMRHPE+GPKLQLMA+AGL+SFR
Sbjct: 23 WGALDEERKQKGPSLMEQMMAEAMAAKEVKSQEQRLEQSRDAKQTFGGGLKKGFLSRPTRTTAVSSAXXXXXXXXXXXXRGKESTS----GAPP----EVEGSIPVITGRKASSGGLEFDVSAEASSTTSDSLLLPEVQEAMKHSASNPL--GGASGGGGGQ-EWLTPELLQKISEKPRLAAMLTDPRFSKAMELMSTSPKDALGMFESSAEARESFTELMSLLSKHFTAMGDAADEKAAAEEADRRRVADGPLAQEALRRAAEGVGVAATPATAEETATVDKVLQQPELRELLMDPGMQRVLQECGEPQELARYMRHPEFGPKLQLMAKAGLISFR 348
BLAST of mRNA_D-herbacea_M_contig9.15701.1 vs. uniprot
Match: A0A835Z085_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z085_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.670e-22 Identity = 86/216 (39.81%), Postives = 117/216 (54.17%), Query Frame = 2
Query: 674 LILPEVQEALKQSTDSAAAAGGDVGGVGNTGEWLTPELLDKISRKPRMAAMLNDPRFAKAMQLMAKSPKEALGMFASNPEARDSFTELMALLAEHFKGMGVAADREREAQEAERKRVQEGPLAREALRRAAEGXXXXXXXXXXXXXXXXXXXXXXXX-----------LRELLMDPCMQRILQECGDPAALARYMRHPEYGPKLQLMARAGLVSFR 1288
++LPEVQ+A+ + + + +T WLTP LL KI+ +P +AA L PRF +A++LM P+ A+ +F + +AR FTEL+ LL HF+ +G + XXXXXXXXXXXXXXXXXXXX LRELL+DP MQ +LQEC P L Y HPE+GPK++ +A+AGLV +
Sbjct: 1 VVLPEVQDAMAEQGRAL---------LSSTDAWLTPALLSKIAARPALAAALQSPRFTRALELMRDDPRAAMALFGGDADARALFTELLGLLGTHFEELGAQTSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADADVARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQAGLVQIQ 207
BLAST of mRNA_D-herbacea_M_contig9.15701.1 vs. uniprot
Match: A0A7S2EKF9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EKF9_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 7.230e-19 Identity = 81/231 (35.06%), Postives = 122/231 (52.81%), Query Frame = 2
Query: 674 LILPEVQEALKQSTDSAAAAGGDVGGVGNTGEWLTPELLDKISRKPRMAAMLNDPRFAKAMQLMAKSPKEALGMFASNPEARDSFTELMALLAEHFKGMGVAADREREAQE-----------------AERKRVQEGPLAREALRRAAEGXXXXXXXXXXXXXXXXXXXXXXXX------------LRELLMDPCMQRILQECGDPAALARYMRHPEYGPKLQLMARAGLV 1279
LI E+Q+A+K + D+ +G W TP+L++KIS+ PR+ A L++P+FA A++ + K+P+ A+ F ++PE D E +L EHF +G ++ + R + GP+A + L++ A XXXXXXXXXXXXXXXX L +LLMD Q I+QEC P + YM+HPE+GPKL+ + +AGL+
Sbjct: 90 LIFEEIQDAMKNTPSF------DINNA--SGSWATPDLMEKISKNPRLLAGLSNPKFAAALEALQKNPRMAMKKFQNHPEIMDYLHEFCGVLGEHFTKLGEEQEKXXXXXXXXXXXXXXXXXXXXXSISSRSKKNIGPIAEKVLKKHATNQTTXXXXXXXXXXXXXXXXTARKDKEKVDSILANRELVDLLMDAEFQNIMQECSIPGRMQMYMQHPEHGPKLRKLLQAGLL 312
BLAST of mRNA_D-herbacea_M_contig9.15701.1 vs. uniprot
Match: A0A7S3ZLE6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZLE6_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 3.360e-14 Identity = 84/327 (25.69%), Postives = 138/327 (42.20%), Query Frame = 2
Query: 320 PSLLEKMTAEAMAAREEKTEATRKEHRKDTKKGFGGGLKKGFLMQKSSATGAASQKSRKGDRETKPSLDAISTSSSSSGAAPLPAGEARDTMPVISGRRSQTGGLDFDVSAKTADDAGLILPEVQEALKQSTDSAAAAGGD-VGGVGNTGEWLTPELLDKISRKPRMAAMLNDPRFAKAMQLMAKSPKEALGMFASNPEARDSFTELMALLAEHFKGMGVAADREREAQEA---ERKRVQEGPLAREALRRAAEGXXXXXXXXXXXXXXXXXXXXXXXXLRELLMDPCMQRILQECGDPAALARYMRHPEYGPKLQLMARAGLVSFR 1288
PSL + M +A+ + E+ T KE ++ KK FG G+KKG +KG + KPS S A P + D MP I+ + G EV +++K+ S+ A + GEW+TP+L+ +++++P +A +++P++ A+Q + K PK F S+PE + TE ++ H + D + + A E+++ + GPL + A G LRELLM+P Q ++Q C DP A MR P + + +AGLV +
Sbjct: 55 PSLADLMMGDALQNKAERAAKTAKEEKR-MKKSFGDGMKKGL---------------KKGFFDKKPS-------SKKQPAKPKXXXK-EDEMPTITRSSKKEPG------------------EVMQSMKEEIASSMAQDRHPLAAALQGGEWVTPDLIKEMAKRPVLAKGMSNPKYQAALQELQKDPKNGAKKFDSDPELKRFLTEFCEVMGSHMIKLAGDEDAPKPSTPALPTEKEKKEMGPLCSQIAEDCANGKGPEPCKTKKEQDEVDAVLKNEE-LRELLMNPKTQELMQRCSDPRAFQEAMRDPANRAIIGKLEQAGLVQLQ 338
BLAST of mRNA_D-herbacea_M_contig9.15701.1 vs. uniprot
Match: F0Y4B4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4B4_AURAN) HSP 1 Score: 87.4 bits (215), Expect = 6.330e-14 Identity = 88/323 (27.24%), Postives = 136/323 (42.11%), Query Frame = 2
Query: 323 SLLEKMTAEAMAAREEKTEATRKEHRKDTKKGFGGGLKKGFLMQKSSATGAASQKSRKGDRETKPSLDAISTSSSSSGAAPLPAGEARDTMPVISGRRSQTGGLDFDVSAKTADDAGLILPEVQEALKQSTDSAAAA--GGDVGGVGNTGEWLTPELLDKISRKPRMAAMLNDPRFAKAMQLMAKSPKEALGMFASNPEARDSFTELMALLAEHFKGMGVAADREREAQEAERKRVQEGPLAREALRRAAEGXXXXXXXXXXXXXXXXXXXXXXXXLRELLMDPCMQRILQECGDPAALARYMRHPEYGPKLQLMARAGLVSF 1285
SL++ M A+A R + A RKE K KK FG G+KKG +KG + KP + A P D + + + + G S ++A I EV ++ S+ A A GGD W+TPEL+ ++ +P +A + DPR A++ + K PK F +PE + T+ ++ HF+ +G A + ++ Q GPLA + + AA+G LR+LLMDP Q ++Q C DP R M +P+ ++ +A AGLV
Sbjct: 67 SLMDLMMADASTDRTARA-AKRKEEDKRMKKSFGDGMKKGL---------------KKGFFDAKPKAKKRAP------AEPXXXXXXADPVTITARPPADDGA-----SVRSA-----IRSEVAANMEGSSHPMAQALKGGD---------WVTPELVKAMAERPALARGMGDPRCQAALEALRKDPKAGAKQFDDDPELKQFLTDFCEVMGGHFEKLGAAXXXXXXTAD---EKEQLGPLAAKVVEDAAKGQGPAPAKTPEEIKQVDDVLNNAA-LRDLLMDPKTQLLMQRCADPREFQRAMMNPDERAIIRKLADAGLVKL 344
BLAST of mRNA_D-herbacea_M_contig9.15701.1 vs. uniprot
Match: W4GNU8_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNU8_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.210e-9 Identity = 52/218 (23.85%), Postives = 94/218 (43.12%), Query Frame = 2
Query: 659 ADDAGLILPEVQEALKQSTDSAAAAGGDVGGVGNTGEWLTPELLDKISRKPRMAAMLNDPRFAKAMQLMAKSPKEALGMFASNPEARDSFTELMALLAEHFKGMGVAADREREAQEAERKRVQEGPLAREALRRAAEGXXXXXXXXXXXXXXXXXXXXXXXXLRELLMDPCMQR---------ILQECGDPAALARYMRHPEYGPKLQLMARAGLVSF 1285
A ++ L LPEV +A+ Q + +W+TP +K+ R P++ + +PRF A+Q M+ +P A+ + ++P+ F + + + HF+ +G E + R +Q L ++ R+ E ++ +L DP + +L+ C P L++YM +GPK+Q +ARAGLV
Sbjct: 97 AKESSLHLPEVHDAMNQMQNLKPE------------DWMTPAFFEKLGRNPKLCQAMKNPRFTAAIQEMSTNPTAAILKYQNDPDFGVMFKDFLQFMGHHFEELGKI---EEKTAIPTRDDIQRQALT--SMSRSPE---------------------EDAVVQRILADPELXXXXXXXXXXXVLRACQVPGVLSKYMNDKVFGPKIQKLARAGLVQL 276 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig9.15701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_M_contig9.15701.1 >prot_D-herbacea_M_contig9.15701.1 ID=prot_D-herbacea_M_contig9.15701.1|Name=mRNA_D-herbacea_M_contig9.15701.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=413bp MVMLVPDTGAAAAATPAPRHAGERETLDIPEEGGSSLLSVLRLGAPANSKback to top mRNA from alignment at D-herbacea_M_contig9:2358338..2360311+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_M_contig9.15701.1 ID=mRNA_D-herbacea_M_contig9.15701.1|Name=mRNA_D-herbacea_M_contig9.15701.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=1974bp|location=Sequence derived from alignment at D-herbacea_M_contig9:2358338..2360311+ (Desmarestia herbacea DmunM male)back to top Coding sequence (CDS) from alignment at D-herbacea_M_contig9:2358338..2360311+ >mRNA_D-herbacea_M_contig9.15701.1 ID=mRNA_D-herbacea_M_contig9.15701.1|Name=mRNA_D-herbacea_M_contig9.15701.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=2478bp|location=Sequence derived from alignment at D-herbacea_M_contig9:2358338..2360311+ (Desmarestia herbacea DmunM male)back to top |