mRNA_D-herbacea_M_contig9.15699.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig9.15699.1
Unique NamemRNA_D-herbacea_M_contig9.15699.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig9.15699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig9contigD-herbacea_M_contig9:2347550..2349673 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size416
Cds size414
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig9.15699.1prot_D-herbacea_M_contig9.15699.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig9 2347550..2349673 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935678.026701-CDS-D-herbacea_M_contig9:2347549..23477411622935678.026701-CDS-D-herbacea_M_contig9:2347549..2347741Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2347550..2347741 -
1690880653.7441564-CDS-D-herbacea_M_contig9:2347549..23477411690880653.7441564-CDS-D-herbacea_M_contig9:2347549..2347741Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2347550..2347741 -
1622935678.0432646-CDS-D-herbacea_M_contig9:2348957..23490771622935678.0432646-CDS-D-herbacea_M_contig9:2348957..2349077Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2348958..2349077 -
1690880653.7552292-CDS-D-herbacea_M_contig9:2348957..23490771690880653.7552292-CDS-D-herbacea_M_contig9:2348957..2349077Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2348958..2349077 -
1622935678.0609543-CDS-D-herbacea_M_contig9:2349571..23496731622935678.0609543-CDS-D-herbacea_M_contig9:2349571..2349673Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2349572..2349673 -
1690880653.7653916-CDS-D-herbacea_M_contig9:2349571..23496731690880653.7653916-CDS-D-herbacea_M_contig9:2349571..2349673Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2349572..2349673 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig9.15699.1

>prot_D-herbacea_M_contig9.15699.1 ID=prot_D-herbacea_M_contig9.15699.1|Name=mRNA_D-herbacea_M_contig9.15699.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=138bp
LNLKELFLHENKLWGNIPESLRHLKDLRYLYLYKNKLTGTIPEWLAELSH
LHGLVLGENKLRGQIPWQLGHLHELQDLYLNDNDLDGGIPERLLNCERLQ
RLFLGGNRLTGSVPRYLRHMNDLRELNIERNNLHGEV*
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mRNA from alignment at D-herbacea_M_contig9:2347550..2349673-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig9.15699.1 ID=mRNA_D-herbacea_M_contig9.15699.1|Name=mRNA_D-herbacea_M_contig9.15699.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=2124bp|location=Sequence derived from alignment at D-herbacea_M_contig9:2347550..2349673- (Desmarestia herbacea DmunM male)
CTGAATCTGAAGGAGCTGTTCCTGCACGAGAACAAGCTTTGGGGGAACAT
ACCCGAATCGCTTCGGCACCTGAAGGACCTGCGATATCTGTACTTGTATA
AGGTAATCGAGGAGAAGAAAGATATATATTTTTTTGGCTACCGTTGGGGC
GTCACGATGCTCTCACAACGATCTATGATATATCTACTCGTACAAGGCAA
TCGAGGAGAGGAGGGTTGCCTTTTTTTTGGCTACTGTGGGTTGTCACGAT
GGTCTCATAGCGAGCGGTGCTTCTCTCATGCAGTAGTAGTATGATAGTGA
ACATCTAGATCTACTTCGTATGATAGACCGGTCGTTGTCCACGATAAAAA
ATGCACGCTATGTTATTGCAACCACAGCGTGTATACCTGGACGTAAACAT
CATTTTCACGTAAACATGCCTTCCACGCTAGCATGCCTTCTACATAAATA
GGCCTATTCCACGTGACTTCCAAGTAAACATTCCCTACACACGCAAACAT
GCCTTCCACGTAAACATGCCCCCCCCCCCACGCGCTCTCCACCTTTGCGT
CCTATCACTCGCCGTCACTTCTTCGTTTCCCTCGCAATCAAAATAGAACA
AACTAACTGGCACCATCCCGGAATGGCTAGCCGAGCTGTCGCACCTCCAC
GGGTTAGTTCTGGGGGAGAATAAGCTCAGGGGACAGATACCGTGGCAGCT
GGGACATCTTCATGAGGTGCAGTTAATTGACGAACGTACCACCACCTCCC
CTTCCGAATCACAAATGAATTGGTGTTGCTATCTGGTCACAATCAGCGCC
TGCCCACAAGACAAAAACAATGCATCTAAGAATGGTGACAGCATTGAGTA
TATGTTAGCCAGCGAGTGATGCGGGGATGGAAGCACTGCTGCTGACTGCT
GGGGTGGAGGGGGGTGAAGTAAATTTACGTGTAGTGAAGTCAAGTAAAGT
CGAGTCAAGTGTGGTGACGTGAATTGAGTGGAGAACGAAGCTAAGTGTAG
TGAAGTGAAGTAGGGAGGTGAAGTGAAGTGACGCAGTGAAGTGAAGTGAA
GTAACGTTAAGCTAAGCTAAGTTAATATAATTGAAGTGAAGTGAAATGCC
CCGCGGATGGATGTGCACAGCAACTAACTGGCGTAGGCAAGCAAGTTGTT
TTTCTTCACAATTTCAGGGTAGTAGCAGTGTGACACGGCGCGTGCTAGAC
AGGATTTAGAGTACGAAGAGGTAACAGCTAGAGGGGACATCGGCTGCCGA
ACAGAATAATCCTCGCTGTCGAAGAAACACGCCTCCTTTGAGTCAGCTGC
ATAACAAGTGGCGACAGAGGTTTCTAAACTTGACCGTCAACATACCTGAA
CACATTTAAAGTGTTGTTGGATGTGAAATAACTATTATCATAATTAATTA
TAGACAGACAGCAATATCATAGGTCTGCATATACGGGGACAAAACGCCGT
CCGCCTTTGTCGACATAACCATCCGTCCCCGGCGAAGAGAGCTTTCTACA
TCTATGCAACATAACCACGTCGGGAATGATAGTGGTGGAGGATGAAGGTC
TACCATACGTTCGACTACAACAACAACAGCGCGTGTGGTGATTGTGCAGA
ACAAAAAACACGAACCAACAATAGTCACAGACAAATTGAATTGCTGATCG
ACATTTACTTGTAGAAAATCTCGTATGTGTATCTACGTCAAAATCAACCG
TAGACACATCACACACCGACCAACATCATGCTGTTTTGCGCAACCCCGAT
CGGGCATATACAAGAAACACGCTGGCCAGCAAGACAATGCGGGAGGGCGG
GAGTATGTCCACAAGCACTCTCGCCGTCCTGTGACACTGACAGCGTCACA
ATTTCGCCGATTTTCTGTGCCCCCTGTCTTCCCCTCCACCTATGCAAAAC
TTCCAATACCACAAACAAAAACACTAAATTAGTTGCAAGACTTGTATCTA
AACGACAACGACCTGGACGGGGGTATTCCGGAGAGGCTGCTCAACTGTGA
GCGTCTGCAGCGGCTGTTCTTGGGGGGAAACCGCCTCACAGGAAGCGTCC
CGCGCTACCTGAGACACATGAACGATCTGCGCGAGCTCAACATCGAGAGG
AATAACCTGCACGGAGAGGTATGA
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Coding sequence (CDS) from alignment at D-herbacea_M_contig9:2347550..2349673-

>mRNA_D-herbacea_M_contig9.15699.1 ID=mRNA_D-herbacea_M_contig9.15699.1|Name=mRNA_D-herbacea_M_contig9.15699.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=828bp|location=Sequence derived from alignment at D-herbacea_M_contig9:2347550..2349673- (Desmarestia herbacea DmunM male)
CTGAATCTGAAGGAGCTGTTCCTGCACGAGAACAAGCTTTGGGGGAACAT
ACCCGAATCGCTTCGGCACCTGAAGGACCTGCGATATCTGTACTTGTATA
AGCTGAATCTGAAGGAGCTGTTCCTGCACGAGAACAAGCTTTGGGGGAAC
ATACCCGAATCGCTTCGGCACCTGAAGGACCTGCGATATCTGTACTTGTA
TAAGAACAAACTAACTGGCACCATCCCGGAATGGCTAGCCGAGCTGTCGC
ACCTCCACGGGTTAGTTCTGGGGGAGAATAAGCTCAGGGGACAGATACCG
TGGCAGCTGGGACATCTTCATGAGAACAAACTAACTGGCACCATCCCGGA
ATGGCTAGCCGAGCTGTCGCACCTCCACGGGTTAGTTCTGGGGGAGAATA
AGCTCAGGGGACAGATACCGTGGCAGCTGGGACATCTTCATGAGTTGCAA
GACTTGTATCTAAACGACAACGACCTGGACGGGGGTATTCCGGAGAGGCT
GCTCAACTGTGAGCGTCTGCAGCGGCTGTTCTTGGGGGGAAACCGCCTCA
CAGGAAGCGTCCCGCGCTACCTGAGACACATGAACGATCTGCGCGAGCTC
AACATCGAGAGGAATAACCTGCACGGAGAGGTATGATTGCAAGACTTGTA
TCTAAACGACAACGACCTGGACGGGGGTATTCCGGAGAGGCTGCTCAACT
GTGAGCGTCTGCAGCGGCTGTTCTTGGGGGGAAACCGCCTCACAGGAAGC
GTCCCGCGCTACCTGAGACACATGAACGATCTGCGCGAGCTCAACATCGA
GAGGAATAACCTGCACGGAGAGGTATGA
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