mRNA_D-herbacea_M_contig9.15697.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig9.15697.1
Unique NamemRNA_D-herbacea_M_contig9.15697.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig9.15697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig9contigD-herbacea_M_contig9:2321531..2322263 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons1
Model size733
Cds size375
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig9.15697.1prot_D-herbacea_M_contig9.15697.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig9 2321856..2322230 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935678.9480126-UTR-D-herbacea_M_contig9:2321530..23218551622935678.9480126-UTR-D-herbacea_M_contig9:2321530..2321855Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig9 2321531..2321855 +
1690880653.9869037-UTR-D-herbacea_M_contig9:2321530..23218551690880653.9869037-UTR-D-herbacea_M_contig9:2321530..2321855Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig9 2321531..2321855 +
1622935679.0287843-UTR-D-herbacea_M_contig9:2322230..23222631622935679.0287843-UTR-D-herbacea_M_contig9:2322230..2322263Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig9 2322231..2322263 +
1690880654.0110807-UTR-D-herbacea_M_contig9:2322230..23222631690880654.0110807-UTR-D-herbacea_M_contig9:2322230..2322263Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig9 2322231..2322263 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935679.0092335-CDS-D-herbacea_M_contig9:2321855..23222301622935679.0092335-CDS-D-herbacea_M_contig9:2321855..2322230Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2321856..2322230 +
1690880654.0015903-CDS-D-herbacea_M_contig9:2321855..23222301690880654.0015903-CDS-D-herbacea_M_contig9:2321855..2322230Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 2321856..2322230 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig9.15697.1

>prot_D-herbacea_M_contig9.15697.1 ID=prot_D-herbacea_M_contig9.15697.1|Name=mRNA_D-herbacea_M_contig9.15697.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=125bp
MKRAPKQCMTHQISAGKVAIIQLVLPNTAACSTCDAITMLKNKQKRARTY
QPPTCLCKSNKSTNNFASLCGTILRSMYIYIKLSATAWSYICLHFRTWEI
DSTAASGCGRTVHRGRRPDNVDTR*
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mRNA from alignment at D-herbacea_M_contig9:2321531..2322263+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig9.15697.1 ID=mRNA_D-herbacea_M_contig9.15697.1|Name=mRNA_D-herbacea_M_contig9.15697.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=733bp|location=Sequence derived from alignment at D-herbacea_M_contig9:2321531..2322263+ (Desmarestia herbacea DmunM male)
ACCCGCGGTCACCATCTATGTACAGCGTCACTTCGATTGTTGTGTTGAAA
AAAAGGCTGTTTTTCATCGCCGCGTGCCGCGTACCTTGCTCGACATAAAT
TACGACTCCCAATGGTGGCAACCACACCCAAGACGCCACCAAGAACGGCA
GCACCCGCGGTTGATTCACCATTCAACTATCACGGTGACCTGGAAACAAA
GTGTCCCTGGCGGGCTATCTTCGATGCGCTATTATAGTCTAGATATCTAT
ATATGAAGCATCATAGAGCACCGACGCATACGGCCAGAATACAAGCAACC
CTACCCCATCGCATTCCACTCCTCCATGAAACGCGCACCAAAGCAATGCA
TGACGCATCAAATTTCGGCGGGCAAAGTCGCCATCATTCAGCTCGTCCTA
CCGAACACGGCTGCCTGCTCGACCTGCGACGCCATTACCATGCTAAAAAA
CAAACAAAAACGAGCACGCACATACCAACCTCCCACGTGTTTGTGCAAAA
GCAATAAAAGCACCAACAACTTCGCGTCGCTGTGCGGTACAATACTTCGA
AGTATGTATATATACATCAAACTCAGCGCAACAGCCTGGTCTTACATCTG
TCTTCATTTCAGGACTTGGGAGATAGATAGCACGGCAGCCTCAGGCTGTG
GGAGGACGGTACACCGCGGTCGTCGGCCAGACAATGTAGACACGCGGTAG
TAAGGCGTGCCATCTCGTTGCGGCACATTTTCC
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Coding sequence (CDS) from alignment at D-herbacea_M_contig9:2321531..2322263+

>mRNA_D-herbacea_M_contig9.15697.1 ID=mRNA_D-herbacea_M_contig9.15697.1|Name=mRNA_D-herbacea_M_contig9.15697.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=750bp|location=Sequence derived from alignment at D-herbacea_M_contig9:2321531..2322263+ (Desmarestia herbacea DmunM male)
ATGAAACGCGCACCAAAGCAATGCATGACGCATCAAATTTCGGCGGGCAA
AGTCGCCATCATTCAGCTCGTCCTACCGAACACGGCTGCCTGCTCGACCT
GCGACGCCATTACCATGCTAAAAAACAAACAAAAACGAGCACGCACATAC
CAACCTCCCACGTGTTTGTGCAAAAGCAATAAAAGCACCAACAACTTCGC
GTCGCTGTGCGGTACAATACTTCGAAGTATGTATATATACATCAAACTCA
GCGCAACAGCCTGGTCTTACATCTGTCTTCATTTCAGGACTTGGGAGATA
GATAGCACGGCAGCCTCAGGCTGTGGGAGGACGGTACACCGCGGTCGTCG
GCCAGACAATGTAGACACGCGGTAGATGAAACGCGCACCAAAGCAATGCA
TGACGCATCAAATTTCGGCGGGCAAAGTCGCCATCATTCAGCTCGTCCTA
CCGAACACGGCTGCCTGCTCGACCTGCGACGCCATTACCATGCTAAAAAA
CAAACAAAAACGAGCACGCACATACCAACCTCCCACGTGTTTGTGCAAAA
GCAATAAAAGCACCAACAACTTCGCGTCGCTGTGCGGTACAATACTTCGA
AGTATGTATATATACATCAAACTCAGCGCAACAGCCTGGTCTTACATCTG
TCTTCATTTCAGGACTTGGGAGATAGATAGCACGGCAGCCTCAGGCTGTG
GGAGGACGGTACACCGCGGTCGTCGGCCAGACAATGTAGACACGCGGTAG
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