prot_D-herbacea_F_contig117.1227.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig117.1227.1
Unique Nameprot_D-herbacea_F_contig117.1227.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length127
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig117.1227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..65
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..83
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig117contigD-herbacea_F_contig117:327159..327539 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig117.1227.1mRNA_D-herbacea_F_contig117.1227.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig117 327025..327643 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig117.1227.1 ID=prot_D-herbacea_F_contig117.1227.1|Name=mRNA_D-herbacea_F_contig117.1227.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=127bp
MCGVLFFFCLLLRAFFLFIFFLAAVGGRRGRRERWTFPFLERGRGVLNIK
IQLQTGLCLNHGCVCFERQTIFMSAVTIAWYLISSLKRRWRKRVEAALQR
DRRWVGVNAASGRDMRRRPNTRGLTV*
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