prot_D-herbacea_F_contig116.1171.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig116.1171.1
Unique Nameprot_D-herbacea_F_contig116.1171.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length521
Homology
BLAST of mRNA_D-herbacea_F_contig116.1171.1 vs. uniprot
Match: D8LT38_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT38_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 1.920e-119
Identity = 249/539 (46.20%), Postives = 317/539 (58.81%), Query Frame = 0
Query:    1 MPQGRRVRITP------------EEATFPAPAPHCLGPFSVRGVNDPSAQSAKDKKKKIEDVSSAFSSRTGFF--GRSKRAPKRNDVAGASAKRAAVSFVISLTQSFSRWVWGSTPTSGSASHPQLALDRQWLLADADGCRAYAMPMLPLLQTVTLTLARGIKGSVPVQLMVKAGTIAAHETSMWLEGWQAKFDEDNAIHTRLERWAVASEALSESLMLRRRTLFDVNTGFDA-RRKTTEALERLLAYWRSAQEMAETAKSEAATRLVERQSSLGAGRMGGALDKKVALQLFKKWVRSDDRDKVLIMHRSGPPAGEA---VVQTVGYIHVDLDTPTPILREFIRRFCGDWLNEHAKARGERFDMENSKGELVRRGREGDKDTPTAMEMVQSRVNKGTRGTEAVVYVQNEINRKDPEADVEAVLIPTQDILDPEATPAFDDEL-------DSGDEQASGRGKPKSKKRKNKAGGGDEXXXXXXXXXXXMDGSTNGTDNEGSIGSMGSDIAEHMDDPFAMMQIDEQEVKEEQSKTVEAATA 514
            MP GRRVR+ P            E    P P  H  GPF V GV +       DKK K    +SA +        G +K  P     +GA+A   A S     T + +     S     + S P L LDRQWLL +A  C+AYAMP+LP++Q + + L  GI+ S  VQ+ +K   +  H+    LE WQ KFD+D+ +H RLERWA  SE  S+ LMLRRR LFDV  GF   +R+  EA+E +LA W S QEM + AKS AAT L   Q + G G +GG L ++V +QLFKKWV+SDDR KV+IMHRSG  A E    VVQ VGYI VDLDTPTP+LREFIRR+CG WLNEHAK  G+ F ME++ GE+VRR REG K   TAM+MVQ R+NK TR TE+V++V++E +R DP+A+VE VLIP +D LDPE+TP F+D +       D+GD     +G  K  + ++ A GGDE            D  +       SIGSMGSD+ E  DDPFA MQ D Q+ K+  +      TA
Sbjct:  867 MPYGRRVRVEPTDPSSVYLLPEAEAGACPRPPSHAFGPFYVVGVKE---SRQNDKKDKAAAAASALAGNLASKEPGDTKERPATGLGSGAAATTPAESIGEGGTAAGADGGEDSVVDLKAQSSPVLILDRQWLLEEAPLCQAYAMPILPVIQKILMVLRTGIRDSSVVQVAIKVAVVGTHQHRDRLERWQTKFDDDSDMHARLERWAAGSEDRSKRLMLRRRKLFDVEEGFQPEKRRVMEAVESVLALWTSLQEMTDFAKSAAATGLASTQGADGKGMIGGKLGREVVVQLFKKWVQSDDRTKVIIMHRSGKAANEPAVEVVQVVGYIKVDLDTPTPVLREFIRRYCGGWLNEHAK--GDHFVMEDTTGEIVRRNREGGKLNATAMDMVQERINKTTRDTESVIFVRDERSRTDPDAEVELVLIPEKDFLDPESTPTFEDGVNAHEEGNDNGDGDVDAKGARKKHREEDGADGGDESDAGGRSSDFSSDQFS------ASIGSMGSDLEEDEDDPFAAMQKDLQDEKDAHNSATNNDTA 1394          
BLAST of mRNA_D-herbacea_F_contig116.1171.1 vs. uniprot
Match: A0A6H5KFP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP2_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 3.400e-89
Identity = 228/585 (38.97%), Postives = 291/585 (49.74%), Query Frame = 0
Query:    1 MPQGRRVRITPEEATF------------PAPAPHCLGPFSVRGVNDPSAQSAKDKKKKIEDVSSAFSSRTGFFGRSKRAPKRNDVAGASAKRAAVSFVISLTQSFSRWVWGST---PTSG-----SASHPQLALDRQWLLADADGCRAYAMPMLPLLQTVTLTLARGIKGSVPVQLMVKAGTIAAHETSMWLEGWQAKFDEDNAIHTRLERWAVASEALSESLMLRRRTLFDVNTGFDA-RRKTTEALERLLAYWR----------------------------------------SAQEMAETAKSEAATRLVERQSSLGAGRMGGALDKKVALQLFKKWVRSDDRDKVLIMHRSGPPAGEA---VVQTVGYIHVDLDTPTPILREFIRRFCGDWLNEHAKARGERFDMENSKGELVRRGREGDKDTPTAMEMVQSRVNKGTRGTEAVVYVQNEINRKDPEADVEAVLIPTQDILDPEATPAFDD-------ELDSGDEQASGRGKPKSKKRKNKAGGGDEXXXXXXXXXXXMDGSTNGTDNEGSIGSMGSDIAEHMDDPFAMMQIDEQEVKEEQSKTVEAATA 514
            MP GRRVR+ P + +             P P  H  GPF V GV + S QS  DKK+K                                  AA +  ++L ++ +    G T   P +G     +A+ P  ++D       ADG                        G     L   A +I     + + +  Q KFD+D+ +H RLERWA  SEA S+ LMLRRR LFDV  GF   +R+  EA+E +LA W                                         S QEM + AKS AAT L   Q + G G +GG L ++V +QLFKKWV+SDDR KV+IMHRSG  A E    VVQ VGYI VDLDTPTP+LREFIRRFCG WLNEHAK  G+ F ME++ G +VRR REG K   TAM+MVQ R+NK TR TE+V++VQ+E +R DP+A+VE VLIP +D LDPE+TP F+D       E D GD     +G  K  + ++ A GGDE            D  +       SIGSMGSD+ E  DDPFA MQ D Q+ K+  +   +  TA
Sbjct:  151 MPYGRRVRVEPTDPSSVYFLPEAGTRACPRPPSHAFGPFYVVGVKE-SRQS--DKKEK----------------------------------AAATAALALAENLASKEPGDTRERPATGLGSGAAATTPAESIDEGGTAVGADG-------------------GEDSLGD----LKSHAPSIFGFLNTAFSDREQTKFDDDSNMHARLERWAAGSEAWSKRLMLRRRKLFDVEEGFQPEKRRVMEAVESVLALWTRILQPACRGDLRVWRSRRNMKTDETVATFSLALFGGTLNPSLQEMTDFAKSAAATGLASTQGADGKGIIGGKLGREVVVQLFKKWVQSDDRTKVIIMHRSGKAANEPAVEVVQVVGYIKVDLDTPTPVLREFIRRFCGGWLNEHAK--GDHFVMEDATGTVVRRNREGGKQNATAMDMVQERINKATRDTESVIFVQDERSRTDPDAEVELVLIPEKDFLDPESTPTFEDGVNADEGEKDHGDGDVDAQGARKKHREEDGADGGDERYADGRSSDVSSDQFS------ASIGSMGSDLEEDEDDPFAAMQKDLQDEKDAHNSATKNDTA 667          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig116.1171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LT38_ECTSI1.920e-11946.20B box-type domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5KFP2_9PHAE3.400e-8938.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig116contigD-herbacea_F_contig116:273682..281059 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig116.1171.1mRNA_D-herbacea_F_contig116.1171.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig116 273682..281071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig116.1171.1 ID=prot_D-herbacea_F_contig116.1171.1|Name=mRNA_D-herbacea_F_contig116.1171.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=521bp
MPQGRRVRITPEEATFPAPAPHCLGPFSVRGVNDPSAQSAKDKKKKIEDV
SSAFSSRTGFFGRSKRAPKRNDVAGASAKRAAVSFVISLTQSFSRWVWGS
TPTSGSASHPQLALDRQWLLADADGCRAYAMPMLPLLQTVTLTLARGIKG
SVPVQLMVKAGTIAAHETSMWLEGWQAKFDEDNAIHTRLERWAVASEALS
ESLMLRRRTLFDVNTGFDARRKTTEALERLLAYWRSAQEMAETAKSEAAT
RLVERQSSLGAGRMGGALDKKVALQLFKKWVRSDDRDKVLIMHRSGPPAG
EAVVQTVGYIHVDLDTPTPILREFIRRFCGDWLNEHAKARGERFDMENSK
GELVRRGREGDKDTPTAMEMVQSRVNKGTRGTEAVVYVQNEINRKDPEAD
VEAVLIPTQDILDPEATPAFDDELDSGDEQASGRGKPKSKKRKNKAGGGD
EGDASDADSSSDMDGSTNGTDNEGSIGSMGSDIAEHMDDPFAMMQIDEQE
VKEEQSKTVEAATADAYAAL*
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