prot_D-herbacea_F_contig113.1035.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig113.1035.1
Unique Nameprot_D-herbacea_F_contig113.1035.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length258
Homology
BLAST of mRNA_D-herbacea_F_contig113.1035.1 vs. uniprot
Match: D7FTP9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTP9_ECTSI)

HSP 1 Score: 282 bits (721), Expect = 1.630e-92
Identity = 151/258 (58.53%), Postives = 173/258 (67.05%), Query Frame = 0
Query:   10 IDRIRVKNGYGLNTSALSSSVIGRFDASSEKRCAINRSWEHRYTKDAEFQMAQLQSNHPVRKVLHMQKCYPETVRRLNNKNQRGXXXXXXXXXXXXXXXXRWCRMDDARSTFEXXXXXXXXXXXXQPIKDV---------LVKSETRERVAREYQFCRGKMVFNRTKGREAEVEGILTGKSPLEKHSPLFPARATHQQLLGLVHRPNFPNRPAPEVPRERKWLGDNVGWEGNRGLPTPQAGRNAKDGEVWPWPSSQFP 258
            +++IRVKNGYG  TS LS+SVIG FDASSE+R A NR+W  +Y  DA FQM QLQ NHPVRKVLHMQKCYPETV RLN + +                  RW R + A + +             Q              L  + TR R   EY FCR KM +NRT+GREAEV+GILTG SPL+K  PLFPA+ATHQQLLGLVHRP  P++PAP VPRERKWLGDNVGWEGNRG+ TP AGRNAKDGEV PWPSSQ+P
Sbjct:    1 MEQIRVKNGYGFLTSTLSASVIGDFDASSEERKATNRAWNQKYDTDAVFQMRQLQGNHPVRKVLHMQKCYPETVFRLNRQGR------THEPDADRPISGRWHR-NPAPNNYNTSVATQQRHRRPQSSLQADRSADGGHELSGNTTRRRGGYEYHFCRDKMAYNRTRGREAEVDGILTGTSPLDKRLPLFPAKATHQQLLGLVHRPTHPDKPAPAVPRERKWLGDNVGWEGNRGMATPPAGRNAKDGEVHPWPSSQYP 251          
BLAST of mRNA_D-herbacea_F_contig113.1035.1 vs. uniprot
Match: A0A7S2XVD6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVD6_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.670e-11
Identity = 36/95 (37.89%), Postives = 52/95 (54.74%), Query Frame = 0
Query:  166 TKGREAEVEGILTGKSPLEKHSPLFPARATHQQLLGLVHR--PNFPNRPAPEVPRERKWLGDNVGWEGNRGLPTPQA-GRNAKDGEVWPWPSSQF 257
            T G      G    + P  +  P+FP  A+HQ  L +  +   + P + AP   +  +WLGD VGWE NRGLPTP   G + KDG + PWP++++
Sbjct:    5 TNGARPVTHGGFASRHPSPE--PIFPQGASHQTQLTIDKKLVGDDPRKSAPPTKQPLRWLGDGVGWENNRGLPTPPGVGADGKDGAIKPWPTTKY 97          
BLAST of mRNA_D-herbacea_F_contig113.1035.1 vs. uniprot
Match: A0A835Z766_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z766_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 7.120e-9
Identity = 36/84 (42.86%), Postives = 52/84 (61.90%), Query Frame = 0
Query:    4 AAAGESIDRIRVKNGYGLNTSALSSSVIGRFDASSEKRCAINRSWEHRYTKDAEFQMAQLQSNHPVRKVLHMQKCYPETVRRLN 87
            A AG  + + RV NGYG  TS  S S IG +DAS+ KR   + ++  ++  DA +Q  +    HP +K LH+QKCYP+TV+ L+
Sbjct:    6 ADAGVEVHQRRVVNGYGSTTSLFSPSNIGLYDASALKRQQQSAAFVKQFEADAHYQRQEYSRKHPFKKQLHLQKCYPQTVKLLD 89          
BLAST of mRNA_D-herbacea_F_contig113.1035.1 vs. uniprot
Match: A0A482SA97_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SA97_9ARCH)

HSP 1 Score: 51.2 bits (121), Expect = 2.240e-5
Identity = 27/56 (48.21%), Postives = 34/56 (60.71%), Query Frame = 0
Query:  176 ILTGKSPLEKHSPLFPARATHQQLLGLVHRPNFP--NRPAPEVPRERKWLGDNVGW 229
            I+ G +P+ K   LFP  ATH Q+L L +    P  N+  PEVPR RKW GD+ GW
Sbjct:    4 IIGGTAPMPKIE-LFPQGATHTQILALTNTLKAPDANKLPPEVPRLRKWRGDDKGW 58          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig113.1035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FTP9_ECTSI1.630e-9258.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XVD6_9STRA1.670e-1137.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z766_9STRA7.120e-942.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482SA97_9ARCH2.240e-548.21Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig113contigD-herbacea_F_contig113:649839..653840 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig113.1035.1mRNA_D-herbacea_F_contig113.1035.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig113 649839..653840 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig113.1035.1 ID=prot_D-herbacea_F_contig113.1035.1|Name=mRNA_D-herbacea_F_contig113.1035.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=258bp
MATAAAGESIDRIRVKNGYGLNTSALSSSVIGRFDASSEKRCAINRSWEH
RYTKDAEFQMAQLQSNHPVRKVLHMQKCYPETVRRLNNKNQRGGGHPSST
DSTTPPASSRWCRMDDARSTFESQQQQQQQQQQQQPIKDVLVKSETRERV
AREYQFCRGKMVFNRTKGREAEVEGILTGKSPLEKHSPLFPARATHQQLL
GLVHRPNFPNRPAPEVPRERKWLGDNVGWEGNRGLPTPQAGRNAKDGEVW
PWPSSQFP
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