prot_D-herbacea_F_contig113.1034.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig113.1034.1
Unique Nameprot_D-herbacea_F_contig113.1034.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length1388
Homology
BLAST of mRNA_D-herbacea_F_contig113.1034.1 vs. uniprot
Match: A0A6H5KHC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHC8_9PHAE)

HSP 1 Score: 749 bits (1934), Expect = 7.300e-241
Identity = 582/1473 (39.51%), Postives = 750/1473 (50.92%), Query Frame = 0
Query:    1 QSLVPPSIVELSSTRVVLAWRATRGSCSIRTEAEVDPTDSQEWANLENDEACRPTCKTSRINYRRSSGKKAKATRVEVLEVDHVELQTCSCGCPQCIR-GEEDPPPAQEGEPTA-GCACTRCSPVYGGGLGCWRSVYQGPDCRCQIELQHGNALHHFRLLVRARRPPPERRGFRRPRRQDSPTATSKRHGMAPSVGDNTGDNARAATFVDDSPQRPSSQRYRRKRHSGIDIDYSDTDRSDAPLTLIRYDDVVSHD-TDSMEGGVE---CRMSAGTT----------SPPLESEELSSTSPVR--WFSSASVFVDSRPPPISLHGIGTALVLTWPPPDRFSGSENVSYILEQWSHITAVTTYSTATTVTSEMPTTSRG-NCRFQNRLQEKSGRHLRRHXXXXQGPYRPKPSDDKEVFSVGTRCWFVPSPLENGKRYWYRLRLVHEGGRSVAGPWASHDTSVDPPRCIETGQHDLVLIFPRAIDNHRVDRARGEVKDTDGSRYITPETQ------------LPSSSTSQRYPSTMTTDKTEGHAAAGEDPESEREPDAASGSTHERYGS-----LTEGNGAVPGNER-EVPVVWYTLEGLEKTGSRWIELYRGSSSEVIVE-------------------------------------------GLDANTLNAFRVGIEVDMTELRRRSLGPLESLGLESPPPS----GINALRPLSSNTSTATFTLATMPPRSLRYNNNNCTS---LGVVRPAFRRKNGGSPA--TLLVAPGGSPSR------RLPWNPATNAVMSQMKKEGFAVHDVAATSGGGFYLEQPPPLSRLGRLQGSDDTAGTEGDVIGDG-GQGWFRRDYSDRVEFSTGPAAPRFAAFVAGGVEQQVKVWWAEPQHAVD--TSPPGGPHPPVAA-IADSATVETSMHINSTSAESNESANHYQGLLNHVTTAHKGGDDDGNTPALLRSPVFTLDVLDPVSG-----CLRSVCSGPDLWADIGRSS---SSSSPGDLVPITPATAYFVRLSARTSCGQPEGTVGSVVLTAPPAPVLELVGGGVADDT----------GVATLRAFWTTDVTTSFLPTGENPPRFSTALEMAQAWEAGPPHHGVGRTTATVPVPRSATPGRRYAHAPRGVEKGEGGGTRDCSRVTSNGKQRPLSSEAGHAADVKVDAGGGLCWTLGASSWRKPPRGGRTTRGFRVIWRGFDGES-------EAFTPPLPPGMRFAFRVRIECCYGVALSAVTVYQTARVLPLPPKGLAASLATHESRAGTMSKCVRLSWGPPEPGHGKNVVTSFAVEALRQPQARPGDAKSRREHDAIGAY--------WRHVCSCPNTSCLDPDTLGIAHITADYRVRAEGPGGIGPWCEPLHVDLVSSVASDAPNYHDPDSAVTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERPMMSYVRPGSRERDSLTGEVRRRPWTARRP 1341
            +SL+PPSIVEL+S  VVL+WRA  G CSI+ E   + + SQEWANL+ D         +R +   + G   +   V++ +VDHVELQTC CGCP+C+  G+E+    ++G+     C+C  CS    G  GCWR VYQGP   C+++L  GN +H FRLLVRAR PPP  R F RP          K   ++ S  D +G   +           P  +R RR+         S  D     +TL+     ++   + S  GG +   C  S+G +          S PL  E  ++T+  +  WF S SVFVDSRPP ++LHGIGTALVLTWP     +G E VSYILEQWS  TA  T S    V    P T +G       R  +KS R  RRH    +    PK  D KE F+VGTRCWF+P+ L+ G RYWYRL L+HEGG+ V G W S+ TSV PPRCI      LVL  PRA+D+     + GE +D    R  +P+ Q            LP+     R       +  E     G+   +   P  ++G   E++G+     +T       G E+ E P+VWYTLEG      RW+ LYRG S EV+VE                                           GL+ + L  FR+GI+VD+TELR RSLGPL SL LE   P        A+ P+++   T T   +  P R+ R  +  C S     VVRPA R K+       T  +  G S  +      R  W+PAT+   S+M++EGFA HD +AT GGGFYLE+P  L   GRLQ     A  E   IG G G+G   R+YS  VEF+T P APR+AAFV G    QVK+WWAEP+  ++  T+P     P  A   A  A    S  +     E+ ES    Q +   V      GD    +P   + P+FT+ +L+P +        R V SGP  W  +GR     S+S  G    + P+TA+ V L    +  QPE  V +VV+TAPPAPV+E +   VA+++          G  TL+A W TD+   +LP G + P  S ALEMA   EAG    GVG+T A     + A  G+ +A +PR                TS    RP S        V+ DAG G  WTLG+SSW +          F ++WRG +G +       EA  PPLPPGMRF FRVR+EC +GVA+SA TVY+TARV PL PKGL A L THESRAG +S+CVRL W    PGHG NVVTSF V+A R   + P D  +R   DA   +        W+ V SCP   CLDP TLG+ H+ ADYRVRAEGPGG GPWCEPL VDL+  V  D P      + +  +  XXXXXXXXXX                  R  M +VRPG+R RD LTGE RRR W  +RP
Sbjct:   19 KSLLPPSIVELNSDNVVLSWRAAIGRCSIQVENPDNISASQEWANLDED---------TRKHQHDADGWVKRFGGVKLFDVDHVELQTC-CGCPRCLHEGDENGQENEDGDIKGRACSCLCCSSARCG-RGCWRPVYQGPHNHCRVQLVQGNRMHFFRLLVRARLPPPNMRNFMRP----------KNGVVSGSDPDTSGGVMQPNDGGSPDLSLPDRRRQRRRNEYSRIPTVSCCDPE--AVTLLSSSPALARGGSRSTAGGGDAHACYRSSGRSQQRGGVGVSLSTPLGDESRATTAAGKNVWFVSDSVFVDSRPPAVTLHGIGTALVLTWPALAGLTGGEQVSYILEQWSQATATMTPS----VNRTSPRTDQGVPAELDGR--QKSPRGHRRHHNHRRHLAPPKQVDLKEAFAVGTRCWFMPTGLKTGMRYWYRLSLIHEGGKGVGGMWVSYSTSVIPPRCIGMTSRALVLSLPRALDDTARSGSEGESQD----RRNSPDRQHHADHNNKSDEHLPTPRDENRLSVDNDAEHLEALEMDGQRLGTRNLPTGSAGDKTEKHGNAEDVGVTTNQHPNGGEEKIEQPMVWYTLEGFSVEEKRWVALYRGPSPEVVVEVQKTTFDVETHLAHLPLLPMLQRSIRLPVDVYRNAGVPPLTQQGLEPSALVRFRLGIDVDITELRHRSLGPLASLELEPTSPDVFGFAATAVAPVAAAAPT-TCGESLCPKRTQR--SQTCPSPARSAVVRPALRLKSAAEATNQTRPIGHGASNPKTDLGRNRWQWSPATSPAASKMRREGFAFHDASATVGGGFYLERP--LLSWGRLQCHSGGAMWECCAIGAGAGEGGQCREYSACVEFATAPLAPRYAAFVVGE-SPQVKLWWAEPKPDLESSTAPSAFVRPSSAPPFATPARGRGSHRL--ALVEAQESPPGRQSISVAV------GDRSAVSPYAQQHPLFTVTLLEPATDGDHPPLRRRVYSGPQQWLGLGRYPEFLSASGAGVFAELAPSTAFAVGLCTNATDSQPESEVQAVVVTAPPAPVMEPIA--VANNSAAAEAEGEVFGAVTLKATWRTDIDQRYLPAGIDLPPLSIALEMAHVSEAGLSARGVGQTAA-----KGAQNGQ-HASSPRTAALAT---ATVAVSPTSPNTVRPSSGT--RDIPVRTDAGFGQSWTLGSSSWGRLRSWAEE---FEIVWRGEEGGAGKEKGVVEAQLPPLPPGMRFLFRVRVECPFGVAVSASTVYETARVAPLSPKGLRACLTTHESRAGNISRCVRLFWDAFHPGHGINVVTSFTVQARRLRPSSPEDQVTR---DANHPHPPPTPAHPWQDVSSCPEIGCLDPATLGVPHVLADYRVRAEGPGGKGPWCEPLRVDLL--VQEDTPR-----NGLCLSSGXXXXXXXXXXAVSSVTFAAAEQEKRHSGRQPMDFVRPGARARDPLTGEARRRLWANQRP 1418          
BLAST of mRNA_D-herbacea_F_contig113.1034.1 vs. uniprot
Match: D7FTP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP8_ECTSI)

HSP 1 Score: 666 bits (1719), Expect = 1.580e-211
Identity = 530/1455 (36.43%), Postives = 680/1455 (46.74%), Query Frame = 0
Query:    1 QSLVPPSIVELSSTRVVLAWRATRGSCSIRTEAEVDPTDSQEWANLENDEACRPTCKTSRINYRRSSGKKAKATRVEVLEVDHVELQTCSCGCPQCIR-GEEDPPPAQEGEPTAGCACT-RCSPVYGGGLGCWRSVYQGPDCRCQIELQHGNALHHFRLLVRARRPPPERRGFRRPRRQDSPTATSKRHGMAPSVGDNTGDNARAATFVDDSPQRPSSQRYRRKR-HSGID-IDYSDTDRSDAPLTLIRYDDVVSHDTD-SMEGGVE---CRMSAG----------TTSPPLESEELSSTSPVR--WFSSASVFVDSRPPPISLHGIGTALVLTWPPPDRFSGSENVSYILEQWSHITAVTTYSTATTVTSEMPTTSRGN-CRFQNRLQEKSGRHLRRHXXXXQGPYRPKPSDDKEVFSVGTRCWFVPSPLENGKRYWYRLRLVHEGGRSVAGPWASHDTSVDPPRCIETGQHDLVLIFPRAIDNHRVDRARG------EVKDTDGSRYITPETQLPSSSTSQRYPSTMTTDKTEGHAAAGEDPESEREPDAASGSTHERYGSLTEGNGAVPGNEREVPVVWYTLEGLEKTGSRWIELYRGSSSEVIVEGLDANTLNAFRVGIEVDMTELRRRSLGPLESLGLE--SPPPSGINALRPLSSNTSTATFTLATMPPRSLRYNNN--NCTSLGVVRPAFRRKNGGSPATLLVAPGGSPS-----RRLPWNPATNAVMSQMKKEGFAVHDVAATSGGGFYLEQPPPLSRLGRLQGSDDTAGTEGDVIGDGGQGWFRRDYSDRVEFSTGPAAPRFAAFVAGGVEQQVKVWWAEPQHAVDTSPPGGPHPPVAAIADSATVETSMHINSTSAESNESANHYQGLLNHVTTAHKGGDDDGNTPALLRSPVFTLDVLDPVSGCLRSVCSGPDLWADIGRSS---SSSSPGDLVPITPATAYFVRLSARTSCGQPEGTVGSVVLTAPPAPVLELVGGGVADDT----------GVATLRAFWTTDVTTSFLPTGENPPRFSTALEMAQAWEAGPPHHGVGRTTATVPVPRSATPGRRYAHAPRGVEKGEGGGTRDCSRVTSNGKQRPLSSEAGHAADVKVDAGGGLCWTLGASSWRKPPRGGRTTRGFRVIWRGFDGES-------EAFTPPLPPGMRFAFRVRIECCYGVALSAVTVYQTARVLPLPPKGLAASLATHESRAGTMSKCVRLSWGPPEPGHGKNVVTSFAVEALRQPQARPGDAKSRREHDAIGAY--------WRHVCSCPNTSCLDPDTLGIAHITADYRVRAEGPGGIGPWCEPLHVDLVSSVASDAPNYHDPDSAVTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE---RPMMSYVRPGSRERDSLTGEVRRRPWTARRPHRHRRHRQRSVIPSSPSTVAVMPPSTAVVAAQHRQRRASSHKKFLSG 1388
            +SL+PPSIVEL+   VVL+WRA  G CSI  E   + ++SQEWANL+ D         +R +   + G   K+  V++ +VDHVELQTC CGCP+C+  G+E+    + G    G AC+ RC      G GCWR VYQGP  +C+++L  GN +H FRLLVRAR PPP  R + RP          K   +  S  D +G   +           P+ +R RR+  +SGI  +   D +     +TL      ++H    S  GG +   C  S G          + S PL  E  ++T+  +  WF S SVFVDSRPP ++LHGIGTALVLTWP     SG E +SYILEQWS  T   T     T     P T +G       R + + G      XXX   P  PK  D KE F+VGTRCWF+P+ L+ G RYWYRL L+H+GG+ V G W S+ TSV PPRC+      LVL  PRA+D    D AR       E  + DG    T           +  P+    DKTE +  A                  E  G  T  +      + E P+VWYTLEG      RW+ LYRG S EV+VEGL+ +TL  FR+GI+VD+TELR RSLGPL SL LE  SP   G+ A     +  +  T     + P+  +      + T   VVRPA R K+       +     +P       R  W+PA +   S+M++EGFA HD  AT GGGFYLE+P  L   GRLQ                                                                                                                  H  G++         +P+             R   SG   W  +GR     S++  G    +  +TA+ V L  + +  QPE  V +VV+TAPPAPV+E +   VA+D+          G  TL+A W TD+    LP G + P    ALEMA   EAG    GVG T A V      +   + A +P          T D   V+         S       V+ DAG G  WTLG+SSW    R       F ++WRG +G +       EA +PPLPPGMRF FRVR+EC +GVA+SA TVY+TA V+PL PKGL A LATHESRAG  S+CVRL W    PGHGKNV+TSF V+A R   + P D  +R   DA   +        W+ VCSCP   CLDP TLG+ H+ ADYRVRAEGPGG GPWCEPL VDL+    +       P       XXXXXXXXXX                       R  M +VRPG+R RD LTGE RRR W  +RP +         +P  P+ VA +    AVV A+ R    + H+  L+G
Sbjct:   28 KSLLPPSIVELNRDSVVLSWRAALGKCSIHAENPDNISESQEWANLDED---------TRNHQHAADGSAKKSGDVKIFDVDHVELQTC-CGCPRCLHEGDENNQKDEGGGSLEGRACSCRCCSSARCGRGCWRPVYQGPHNQCRVQLVQGNKMHFFRLLVRARLPPPSMRNYMRP----------KSGVVLGSDPDTSGGVMQPNDGGSHDLTSPNRRRQRRQNEYSGIPTVTCCDPEE----VTLWSGSPALAHGGSCSTAGGGDVHACDRSPGRGQQRGGVGVSLSTPLGDESRATTAAGKSVWFVSDSVFVDSRPPAVTLHGIGTALVLTWPALAGLSGGEQISYILEQWSQATTTPTPFLNRT----SPRTDQGAPSELDGRPKSRRGHXXXXXXXXHLAP--PKQVDLKEAFAVGTRCWFMPTGLKTGMRYWYRLSLIHDGGKGVGGKWVSYSTSVAPPRCVGMTSRALVLSLPRALD----DAARSGSEEHLEAPEMDGQPLET-----------RSLPTGSAGDKTEEYGDA------------------EDVGVTTNQHPNGEEEKIEQPMVWYTLEGFLVEEKRWVALYRGPSPEVVVEGLEPSTLVRFRLGIDVDITELRHRSLGPLASLELEPTSPDAVGVAATAAAPAAAAAPTTCGENLCPKRTQLGQACPSPTRTVVVRPALRLKSTAEAKKSVGHGARNPKTDLGRNRWQWSPAKSPAASKMRREGFAFHDATATVGGGFYLERP--LLSWGRLQ-----------------------------------------------------------------------------------------------------------------CHSDGEE---------TPIR------------RQAYSGLRQWLGLGRYPEFFSANGAGVCAELATSTAFAVGLCTKATDSQPESEVQAVVVTAPPAPVMEPIA--VANDSAAAEAEGEVFGAVTLKATWRTDIDQRHLPAGIDLPPLLIALEMAHIPEAGLSARGVGETAAKV------SQNGQQASSPGTAALTTATATVDGRAVSPTSPNTARPSSGTQNIPVRTDAGFGQSWTLGSSSWG---RSRSRAEEFEIVWRGEEGGAGTEKGVVEAQSPPLPPGMRFLFRVRVECRFGVAVSASTVYETAPVVPLSPKGLRACLATHESRAGNTSRCVRLLWDAFHPGHGKNVITSFTVQARRPRPSSPEDQVTR---DANHPHPPPTPAHPWQVVCSCPEIGCLDPATLGVPHVLADYRVRAEGPGGKGPWCEPLRVDLLVQEDTPRNGLCLPSGGXXXXXXXXXXXXXXCESSGAVSSVTFVAAKQEKRHSGRQPMDFVRPGARARDPLTGEARRRLWVNQRPLK---------VPPPPAAVATLVLPGAVVTARTRTTAMAEHRCRLAG 1260          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig113.1034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KHC8_9PHAE7.300e-24139.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTP8_ECTSI1.580e-21136.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1388..1388
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 770..927
e-value: 49.0
score: 5.5
coord: 296..429
e-value: 0.03
score: 23.5
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 309..594
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 1076..1257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig113contigD-herbacea_F_contig113:641705..649080 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig113.1034.1mRNA_D-herbacea_F_contig113.1034.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig113 641705..649080 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig113.1034.1 ID=prot_D-herbacea_F_contig113.1034.1|Name=mRNA_D-herbacea_F_contig113.1034.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=1388bp
QSLVPPSIVELSSTRVVLAWRATRGSCSIRTEAEVDPTDSQEWANLENDE
ACRPTCKTSRINYRRSSGKKAKATRVEVLEVDHVELQTCSCGCPQCIRGE
EDPPPAQEGEPTAGCACTRCSPVYGGGLGCWRSVYQGPDCRCQIELQHGN
ALHHFRLLVRARRPPPERRGFRRPRRQDSPTATSKRHGMAPSVGDNTGDN
ARAATFVDDSPQRPSSQRYRRKRHSGIDIDYSDTDRSDAPLTLIRYDDVV
SHDTDSMEGGVECRMSAGTTSPPLESEELSSTSPVRWFSSASVFVDSRPP
PISLHGIGTALVLTWPPPDRFSGSENVSYILEQWSHITAVTTYSTATTVT
SEMPTTSRGNCRFQNRLQEKSGRHLRRHHHHHQGPYRPKPSDDKEVFSVG
TRCWFVPSPLENGKRYWYRLRLVHEGGRSVAGPWASHDTSVDPPRCIETG
QHDLVLIFPRAIDNHRVDRARGEVKDTDGSRYITPETQLPSSSTSQRYPS
TMTTDKTEGHAAAGEDPESEREPDAASGSTHERYGSLTEGNGAVPGNERE
VPVVWYTLEGLEKTGSRWIELYRGSSSEVIVEGLDANTLNAFRVGIEVDM
TELRRRSLGPLESLGLESPPPSGINALRPLSSNTSTATFTLATMPPRSLR
YNNNNCTSLGVVRPAFRRKNGGSPATLLVAPGGSPSRRLPWNPATNAVMS
QMKKEGFAVHDVAATSGGGFYLEQPPPLSRLGRLQGSDDTAGTEGDVIGD
GGQGWFRRDYSDRVEFSTGPAAPRFAAFVAGGVEQQVKVWWAEPQHAVDT
SPPGGPHPPVAAIADSATVETSMHINSTSAESNESANHYQGLLNHVTTAH
KGGDDDGNTPALLRSPVFTLDVLDPVSGCLRSVCSGPDLWADIGRSSSSS
SPGDLVPITPATAYFVRLSARTSCGQPEGTVGSVVLTAPPAPVLELVGGG
VADDTGVATLRAFWTTDVTTSFLPTGENPPRFSTALEMAQAWEAGPPHHG
VGRTTATVPVPRSATPGRRYAHAPRGVEKGEGGGTRDCSRVTSNGKQRPL
SSEAGHAADVKVDAGGGLCWTLGASSWRKPPRGGRTTRGFRVIWRGFDGE
SEAFTPPLPPGMRFAFRVRIECCYGVALSAVTVYQTARVLPLPPKGLAAS
LATHESRAGTMSKCVRLSWGPPEPGHGKNVVTSFAVEALRQPQARPGDAK
SRREHDAIGAYWRHVCSCPNTSCLDPDTLGIAHITADYRVRAEGPGGIGP
WCEPLHVDLVSSVASDAPNYHDPDSAVTAAAAAKLPATGSGGGGGGGGGV
MYEKEPPPPERPMMSYVRPGSRERDSLTGEVRRRPWTARRPHRHRRHRQR
SVIPSSPSTVAVMPPSTAVVAAQHRQRRASSHKKFLSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036116FN3_sf
IPR003961FN3_dom