prot_D-herbacea_F_contig113.1033.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig113.1033.1
Unique Nameprot_D-herbacea_F_contig113.1033.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length488
Homology
BLAST of mRNA_D-herbacea_F_contig113.1033.1 vs. uniprot
Match: D7FTP7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTP7_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 5.120e-70
Identity = 179/402 (44.53%), Postives = 227/402 (56.47%), Query Frame = 0
Query:  103 FSLPGLLQDCPLQIEDPDVAETDTGYTLTFNLPKEVQEDGVDISVSGRLLTIEVRVTREDKQ---GNAADV-TTGRGGGVSH--SSRTHSAARSFVLPIGVAASDVTASWVSDGKVGVKLDKSPGGTAEESARDKVSIG----VAGGMEDAAGVPV---HGMKKTTDKVSSSAAEYLSGLMSAPQTVNGVEPSRSSXXXXXXXXXXXXXXXXXSSPGRSWRPAGVEGDHRRNRSVLAALDEEFRDLAKAMWC-DGTVRFPTEEQVAATVEAAREERARRVTAMKRATMATDVSEKDLSYVVKVSLPQGATRDDVKLTVTPDN-ALRVSLSGEGRRSVSKDVRLPLDAVLSEVSAKFQADENETNRDDEEEGV---AMPSRGVSSLEVNVGRAVPPQPKQIDI 486
            F LP +L++CP+ I DP+V ETD GY LTFNLP  + + G+++SVSGRLLT+E R TRE+       +AD  + G  G V    +++T++AARSF LP  V+ ++VTASW +D +V + L K        +  D V+ G    V   MED+  VPV   HG  +     SSSAAEYL G                                     G S +P           S +  LD EFR L + MW  DG+VRFPTEEQVAATV  AR+ER + V A++RATMATDVSEK+L YVVK +LPQGATRDDV+L VTPDN  LRV+  GEG   VSK V LP DA  S++SA+F  +  +  R     G       SR V+ LEV VGRA P  PK I+I
Sbjct:   93 FDLPLVLEECPMCIPDPEVRETDAGYALTFNLPSGISDTGLEVSVSGRLLTVEARTTREENHDVISKSADKGSEGSKGWVMTRCTTKTNAAARSFTLPDSVS-NEVTASWGNDNQVVINLTK-------VAHYDPVNAGGMNNVFSTMEDSGVVPVERRHGDDQHPS-ASSSAAEYLYGS---------------------------------KLDGASLKP-----------SSILELDLEFRSLVRDMWHGDGSVRFPTEEQVAATVARARKERKKIVKALRRATMATDVSEKELEYVVKFALPQGATRDDVELMVTPDNNGLRVAFFGEGNHMVSKAVCLPSDASFSDISARFTPEPRKRGRGGAAGGGLEGGKKSRNVAGLEVAVGRAAPQLPKSIEI 441          
BLAST of mRNA_D-herbacea_F_contig113.1033.1 vs. uniprot
Match: D8LP10_ECTSI (SHSP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP10_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 1.630e-50
Identity = 197/522 (37.74%), Postives = 258/522 (49.43%), Query Frame = 0
Query:   31 QAFQPVSLFMPPSTTTMMRSTKTARLPSRTTPCTVMRYQSPWDLAANSASRVQPAGGSSPKRWSGY------------------TLGPMTFSLPGLLQDCPLQIEDPDVA-ETDTGYTLTFNLPKEVQEDGVDISVSGRLLTIEVRVTREDKQGNAADVTTGRGGGVSHSSRTHSAARSFVLPIGVAASDVTASWV-SDGKVGVKLDKSPGGTAEESARDKVSIGVAGGMEDAAGVPVHGMKKTTDKVSSSAAEYLSGLMSAPQTVNGVEPSRSSXXXXXXXXXXXXXXXXXSSPGRSWRPAGVEGDHRRNRSVLAALDEEFRDLAKAMWCDGTV---RFPTEEQVAATVEAAREERARR------------------VTAMKRATMATDVS--EKDLSYVVKVSLPQGATRDDVKLTVTPDNALRVSLSGEGR-------------RSVSKDVRLPLDAVLSEVSAKFQADENETNRDDEEEGVAMPSRG---------VSSLEVNVGRAVPPQPKQIDIL 487
            QAF   S F  PS   M RS  ++     TT  TV    SPWDL       V P G    +   G                   + GPM F+      +  L++ DP +  ETD  Y L F+LP  V  DG+D+SVS RLLT++  +TRE +    AD  T RGG V+ SSR  S +RSFVLP G+  S  TAS   S  +V    DKS  G A  +A   V+    G +  A          TT   +SSA    + L  +  +          XXXXXXXXXXXXXXXXX    R  RPA          S   A+D+EFR+ AKAMW +  +   + PT+E++A     ARE  A+R                  V AM+RATMA D+S  E   SYVV+ +LP+G TR+DVKLTV P  ++RV++S                 RSV KDV LP DA+LSE+SAKF+A+++   + + EEG    + G         V+ +EV VG+A PPQPK ++IL
Sbjct:   19 QAF--TSSFFSPSKLAMHRSPSSSSTAVPTT--TVTMDCSPWDLECYG---VDPFGRERGRGRGGXXXXXXXXXRKRGMQRYRPSFGPMIFAPSEGQPNQHLRVGDPVIILETDDLYALAFDLPAGVDHDGLDVSVSDRLLTVKASITREQE----ADPFTTRGGWVTRSSRVDSVSRSFVLPEGLVESSATASLAESKAEVRFNKDKSVRGEAASTAAPPVTPSTTGTVASAG--------DTTAAPASSADAGRTPLTDSTGSXPXXXXXXXXXXXXXXXXXXXXXXXXXXXEPRPSRPA----------SPFEAVDQEFREFAKAMWGEDVLERLQVPTQEELAEQAAMAREAWAKREAXXXXXXXXXXXXXXXRVLAMRRATMAADISLSEDGSSYVVRFALPEGTTREDVKLTVNPSKSIRVAVSATSXXXXXXXXXXXXPDRSVYKDVALPKDAILSEISAKFEAEQHPDEKGNAEEGGEKATAGGGGATKEGAVAGVEVTVGKASPPQPKNVEIL 511          
BLAST of mRNA_D-herbacea_F_contig113.1033.1 vs. uniprot
Match: A0A6H5L316_9PHAE (SHSP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L316_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 4.140e-50
Identity = 184/528 (34.85%), Postives = 247/528 (46.78%), Query Frame = 0
Query:   31 QAFQPVSLFMPPSTTTMMRSTKTARLPSRTTPCTVMRYQSPWDLAANSASRVQPAGGSSPKRWSGY-----------------------TLGPMTFSLPGLLQDCPLQIEDPDVA-ETDTGYTLTFNLPKEVQEDGVDISVSGRLLTIEVRVTREDKQGNAADVTTGRGGGVSHSSRTHSAARSFVLPIGVAASDVTASWVSDGKVGVKL--DKSPGGTAEESARDKVS---IGVAGGMEDAAGVPVH----GMKKTTDKVSSSAAEYLSGLMSAPQTVNGVEPSRSSXXXXXXXXXXXXXXXXXSSPGRSWRPAGVEGDHRRNRSVLAALDEEFRDLAKAMWCDGTV---RFPTEEQVAATVEAAREE------------------RARRVTAMKRATMATDVS--EKDLSYVVKVSLPQGATRDDVKLTVTPDNALRVSLSGEGR------RSVSKDVRLPLDAVLSEVSAKFQADENETNRDD-EEEGVAMPSRG--------VSSLEVNVGRAVPPQPKQIDIL 487
            QAF   S F+ PS   M RST  +     TT  TV     PWDL       V P G S   R  G                        + GPM F+      +  LQ+ DP V  ET+  YTL F+LP  V  DG+++SVS RLLT++  +TRE +    AD    RGG V+ SSR  S +RSFVLP G+  S  TAS +S+GK  V+   DKS  G A  +A   ++    G A    D    P      G    TD   S+A                V+ +                    S+P  S  P        R      A+D+EFR+ AKAMW +  +   + PT+E++A     ARE                     +RV AM+RATMA ++S  E+  SYVV+ +LP+G TR+DVKLTV P N++RV++S          R V KDV LP DA+LSE+SAKF+A+++   +   EEEG    + G        V+ +EV VG+A PPQPK ++IL
Sbjct:   19 QAF--TSTFLSPSKLAMHRSTSPSSTAVPTT--TVTMDCGPWDLECYG---VHPFG-SERGRGRGVRXXXXXXXXXXXRRNRGIQRYRPSFGPMIFAPSEGQANQHLQVGDPAVILETNDLYTLAFDLPAGVDHDGLEVSVSDRLLTVKASITREQE----ADPFITRGGWVTRSSRVDSVSRSFVLPEGLVESSATAS-LSEGKAEVRFNKDKSVRGEAASTAAPPITPSTTGTAASAGDTTAAPTSSADAGRTPPTDSTGSTAVAEXXXXXXXXXXXXPVDAA--------------------STPAASTEPRPS-----RPTFPFEAVDQEFREFAKAMWGEHVLERLQVPTQEELAEQAAMAREAWTKRXXXXXXXXXXXXXXXXKRVLAMRRATMAANISLSEEGSSYVVRFALPEGTTREDVKLTVNPSNSIRVAVSARSTAAAGPDRPVYKDVVLPKDAILSEISAKFEAEQHRDGKGTIEEEGEEATAGGGGATKEGAVAGVEVTVGKASPPQPKHVEIL 508          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig113.1033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTP7_ECTSI5.120e-7044.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LP10_ECTSI1.630e-5037.74SHSP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L316_9PHAE4.140e-5034.85SHSP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 120..223
e-value: 3.9E-5
score: 23.7
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 370..446
e-value: 2.1E-6
score: 29.6
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 109..238
e-value: 1.2E-10
score: 42.9
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 366..444
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 120..219
IPR031107Small heat shock protein HSP20PANTHERPTHR11527HEAT-SHOCK PROTEIN 20 FAMILY MEMBERcoord: 120..217
coord: 361..444
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..487
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availableTMHMMTMhelixcoord: 7..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig113contigD-herbacea_F_contig113:629258..634644 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig113.1033.1mRNA_D-herbacea_F_contig113.1033.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig113 628967..634721 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig113.1033.1 ID=prot_D-herbacea_F_contig113.1033.1|Name=mRNA_D-herbacea_F_contig113.1033.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=488bp
MTTKSAHTAAACIVAVILSAIASFNPMRPVQAFQPVSLFMPPSTTTMMRS
TKTARLPSRTTPCTVMRYQSPWDLAANSASRVQPAGGSSPKRWSGYTLGP
MTFSLPGLLQDCPLQIEDPDVAETDTGYTLTFNLPKEVQEDGVDISVSGR
LLTIEVRVTREDKQGNAADVTTGRGGGVSHSSRTHSAARSFVLPIGVAAS
DVTASWVSDGKVGVKLDKSPGGTAEESARDKVSIGVAGGMEDAAGVPVHG
MKKTTDKVSSSAAEYLSGLMSAPQTVNGVEPSRSSSAAAAAAAAAEEEEE
EESSPGRSWRPAGVEGDHRRNRSVLAALDEEFRDLAKAMWCDGTVRFPTE
EQVAATVEAAREERARRVTAMKRATMATDVSEKDLSYVVKVSLPQGATRD
DVKLTVTPDNALRVSLSGEGRRSVSKDVRLPLDAVLSEVSAKFQADENET
NRDDEEEGVAMPSRGVSSLEVNVGRAVPPQPKQIDIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031107HSP20
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom