prot_D-herbacea_F_contig113.1032.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig113.1032.1
Unique Nameprot_D-herbacea_F_contig113.1032.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length491
Homology
BLAST of mRNA_D-herbacea_F_contig113.1032.1 vs. uniprot
Match: A0A6H5L316_9PHAE (SHSP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L316_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 1.300e-66
Identity = 236/546 (43.22%), Postives = 290/546 (53.11%), Query Frame = 0
Query:    9 TQAFQPSFLAPRAQVTNHAGFWNPVVVPDTATMRCSSPWE---------GRMRNRGRRMQPF-----------RRGLEGWPAAPRFGPAIFAP-EGVFEDCATLQVRDPEVS-ETDGKYKLTFDMPTEVDEDGLDVSVSGRLLTVTARVTREASRGGNPSGGPP--SRGGWVSRSSRTDSVSRSFVLPEGISTSEVAASWITDGKVEVKFNKDTPA----------PTTTDTAGSAAGAXXXXATPPQAVSTASRDSKQTSSAGDAINIDADNKSPTTPTASSSAGYLSSLSXXXXXXXXXXXXXXXXXXXXXXXXXXDPDATTSAPSTASSAEAGRRQPRSVLGALDQEFGEFAKAMWGENVL---RFPTEEEVEA----ARDARAKRXXXXXXXXXXXXXXXX-------RATMAVDIWETDENNGASYVVKIALPEGATRDDVKLAITPDNALRVSFSAEGR------RSVFKDVRLPADAVFSEISAKFEAENEEEGEGK-EVRGEDVVVD---------VSSVKVVVGKAVPPQPRRVDIM 490
            +QAF  +FL+P     + +   +   VP T       PW+         G  R RGR ++              RG++ +   P FGP IFAP EG       LQV DP V  ET+  Y L FD+P  VD DGL+VSVS RLLTV A +TRE           P  +RGGWV+RSSR DSVSRSFVLPEG+  S   AS +++GK EV+FNKD             P T  T G+AA A    A P             TSSA      DA    PT  T S++                       XXXXXXXXXXX P    S P  A+S E    +P     A+DQEF EFAKAMWGE+VL   + PT+EE+      AR+A  KRXXXXXXXXXXXXXXXX       RATMA +I  ++E  G+SYVV+ ALPEG TR+DVKL + P N++RV+ SA         R V+KDV LP DA+ SEISAKFEAE   +G+G  E  GE+             V+ V+V VGKA PPQP+ V+I+
Sbjct:   18 SQAFTSTFLSPSKLAMHRSTSPSSTAVPTTTVTMDCGPWDLECYGVHPFGSERGRGRGVRXXXXXXXXXXXRRNRGIQRY--RPSFGPMIFAPSEGQANQ--HLQVGDPAVILETNDLYTLAFDLPAGVDHDGLEVSVSDRLLTVKASITREQEA-------DPFITRGGWVTRSSRVDSVSRSFVLPEGLVESSATAS-LSEGKAEVRFNKDKSVRGEAASTAAPPITPSTTGTAASAGDTTAAP-------------TSSA------DAGRTPPTDSTGSTAVA--------------------EXXXXXXXXXXXXPVDAASTP--AASTEPRPSRPTFPFEAVDQEFREFAKAMWGEHVLERLQVPTQEELAEQAAMAREAWTKRXXXXXXXXXXXXXXXXKRVLAMRRATMAANISLSEE--GSSYVVRFALPEGTTREDVKLTVNPSNSIRVAVSARSTAAAGPDRPVYKDVVLPKDAILSEISAKFEAEQHRDGKGTIEEEGEEATAGGGGATKEGAVAGVEVTVGKASPPQPKHVEIL 508          
BLAST of mRNA_D-herbacea_F_contig113.1032.1 vs. uniprot
Match: D8LP10_ECTSI (SHSP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP10_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 2.190e-64
Identity = 239/537 (44.51%), Postives = 289/537 (53.82%), Query Frame = 0
Query:    9 TQAFQPSFLAPRAQVTNHAGFWNPVVVPDTATMRCSSPWE---------GRMRNRGR-------RMQPFRRGLEGWPAAPRFGPAIFAP-EGVFEDCATLQVRDPEVS-ETDGKYKLTFDMPTEVDEDGLDVSVSGRLLTVTARVTREASRGGNPSGGPPSRGGWVSRSSRTDSVSRSFVLPEGISTSEVAASWITDGKVEVKFNKDTPAPTTTDTAGSAAGAXXXXATPPQAVSTASRDSKQTSSAGDAINIDADNKSPTTPTASSSAGYLSSLSXXXXXXXXXXXXXXXXXXXXXXXXXXDPDATTSAPSTASSAEAGRRQPRSVLGALDQEFGEFAKAMWGENVL---RFPTEEEVEA----ARDARAKRXXXXXXXXXXXXXXXX-------RATMAVDIWETDENNGASYVVKIALPEGATRDDVKLAITPDNALRVSFSAEGR-------------RSVFKDVRLPADAVFSEISAKFEAE-------NEEEGEGKEVRGEDVVVD---VSSVKVVVGKAVPPQPRRVDIM 490
            +QAF  SF +P     + +   +   VP T      SPW+         GR R RGR            +RG++ +   P FGP IFAP EG  +    L+V DP +  ETD  Y L FD+P  VD DGLDVSVS RLLTV A +TRE     +P     +RGGWV+RSSR DSVSRSFVLPEG+  S   AS + + K EV+FNKD           S  G     A PP   ST        +SAGD             P +S+ AG          X XXXXXXXXXXXXXXXXXXXX        P  +        +P S   A+DQEF EFAKAMWGE+VL   + PT+EE+      AR+A AKR  XXXXXXXXXXXXXX       RATMA DI  +++  G+SYVV+ ALPEG TR+DVKL + P  ++RV+ SA                RSV+KDV LP DA+ SEISAKFEAE       N EEG  K   G         V+ V+V VGKA PPQP+ V+I+
Sbjct:   18 SQAFTSSFFSPSKLAMHRSPSSSSTAVPTTTVTMDCSPWDLECYGVDPFGRERGRGRGGXXXXXXXXXRKRGMQRY--RPSFGPMIFAPSEG--QPNQHLRVGDPVIILETDDLYALAFDLPAGVDHDGLDVSVSDRLLTVKASITREQEA--DPF---TTRGGWVTRSSRVDSVSRSFVLPEGLVESSATAS-LAESKAEVRFNKDK----------SVRGEAASTAAPPVTPSTTGT----VASAGDTT---------AAPASSADAGRTPLTDSTGSXPXXXXXXXXXXXXXXXXXXXXXXXXXXXEPRPS--------RPASPFEAVDQEFREFAKAMWGEDVLERLQVPTQEELAEQAAMAREAWAKREAXXXXXXXXXXXXXXXRVLAMRRATMAADISLSED--GSSYVVRFALPEGTTREDVKLTVNPSKSIRVAVSATSXXXXXXXXXXXXPDRSVYKDVALPKDAILSEISAKFEAEQHPDEKGNAEEGGEKATAGGGGATKEGAVAGVEVTVGKASPPQPKNVEIL 511          
BLAST of mRNA_D-herbacea_F_contig113.1032.1 vs. uniprot
Match: D7FTP7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTP7_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 5.730e-39
Identity = 144/418 (34.45%), Postives = 199/418 (47.61%), Query Frame = 0
Query:   84 VFEDCATLQVRDPEVSETDGKYKLTFDMPTEVDEDGLDVSVSGRLLTVTARVTREASR---GGNPSGGPPSRGGWVSR--SSRTDSVSRSFVLPEGISTSEVAASWITDGKVEVKFNKDTPAPTTTDTAGSAAGAXXXXATPPQAVSTASRDSKQTSSAGDAINIDADNKSPTTPTASSSAG-YLSSLSXXXXXXXXXXXXXXXXXXXXXXXXXXDPDATTSAPSTASSAEAGRRQPRSVLGALDQEFGEFAKAMW-GENVLRFPTEEEVEAARDARAKRXXXXXXXXXXXXXXXXRATMAVDIWETDENNGASYVVKIALPEGATRDDVKLAITPDN-ALRVSFSAEGRRSVFKDVRLPADAVFSEISAKFEAENEEEGEGKE----VRGEDVVVDVSSVKVVVGKAVPPQPRRVDI 489
            V E+C  + + DPEV ETD  Y LTF++P+ + + GL+VSVSGRLLTV AR TRE +      +   G     GWV    +++T++ +RSF LP+ +S  EV ASW  D +V +   K              A      A     V +   DS         + ++  +     P+ASSSA  YL                                          S  +    +P S+L  LD EF    + MW G+  +RFPTEE+V AA  ARA++                RATMA D+ E +      YVVK ALP+GATRDDV+L +TPDN  LRV+F  EG   V K V LP+DA FS+ISA+F  E  + G G      + G     +V+ ++V VG+A P  P+ ++I
Sbjct:   98 VLEECP-MCIPDPEVRETDAGYALTFNLPSGISDTGLEVSVSGRLLTVEARTTREENHDVISKSADKGSEGSKGWVMTRCTTKTNAAARSFTLPDSVSN-EVTASWGNDNQVVINLTK-------------VAHYDPVNAGGMNNVFSTMEDSG-------VVPVERRHGDDQHPSASSSAAEYL----------------------------------------YGSKLDGASLKPSSIL-ELDLEFRSLVRDMWHGDGSVRFPTEEQV-AATVARARKERKKIVKALR------RATMATDVSEKE----LEYVVKFALPQGATRDDVELMVTPDNNGLRVAFFGEGNHMVSKAVCLPSDASFSDISARFTPEPRKRGRGGAAGGGLEGGKKSRNVAGLEVAVGRAAPQLPKSIEI 441          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig113.1032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L316_9PHAE1.300e-6643.22SHSP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LP10_ECTSI2.190e-6444.51SHSP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FTP7_ECTSI5.730e-3934.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 350..451
e-value: 3.8E-6
score: 28.6
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 84..217
e-value: 1.0E-12
score: 49.7
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 97..199
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 98..201
e-value: 8.3E-8
score: 32.3
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 84..213
score: 10.782
IPR031107Small heat shock protein HSP20PANTHERPTHR11527HEAT-SHOCK PROTEIN 20 FAMILY MEMBERcoord: 96..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig113contigD-herbacea_F_contig113:624676..627901 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig113.1032.1mRNA_D-herbacea_F_contig113.1032.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig113 623712..627916 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig113.1032.1 ID=prot_D-herbacea_F_contig113.1032.1|Name=mRNA_D-herbacea_F_contig113.1032.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=491bp
MLAFHACPTQAFQPSFLAPRAQVTNHAGFWNPVVVPDTATMRCSSPWEGR
MRNRGRRMQPFRRGLEGWPAAPRFGPAIFAPEGVFEDCATLQVRDPEVSE
TDGKYKLTFDMPTEVDEDGLDVSVSGRLLTVTARVTREASRGGNPSGGPP
SRGGWVSRSSRTDSVSRSFVLPEGISTSEVAASWITDGKVEVKFNKDTPA
PTTTDTAGSAAGASTTTATPPQAVSTASRDSKQTSSAGDAINIDADNKSP
TTPTASSSAGYLSSLSSARKTSAADDSADLAAEAQQQQSPPADPDATTSA
PSTASSAEAGRRQPRSVLGALDQEFGEFAKAMWGENVLRFPTEEEVEAAR
DARAKRVEAVREARAKKISAFRRATMAVDIWETDENNGASYVVKIALPEG
ATRDDVKLAITPDNALRVSFSAEGRRSVFKDVRLPADAVFSEISAKFEAE
NEEEGEGKEVRGEDVVVDVSSVKVVVGKAVPPQPRRVDIM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031107HSP20
IPR002068A-crystallin/Hsp20_dom
IPR008978HSP20-like_chaperone