prot_D-herbacea_F_contig113.1027.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig113.1027.1
Unique Nameprot_D-herbacea_F_contig113.1027.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length473
Homology
BLAST of mRNA_D-herbacea_F_contig113.1027.1 vs. uniprot
Match: D7G031_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G031_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 5.600e-92
Identity = 222/573 (38.74%), Postives = 287/573 (50.09%), Query Frame = 0
Query:    1 MGVPVLLCSDHRLNCAATRSLGGGENGAAVSDEPDGGTCANRGMRDVVRRVRGMLDVVEESLRDEPVTLKAVRGEVGEML-----------------VKLYVSRRPDARWTIQHDLFDRLLRLADPLEAYFRANPDSRSLRSAEWQAVREATSIVDPALEVITKVHGKKS--------------CPEDNATNQPQXXXXXXXXXXXX---------QGVFVAESINLYANLHQSFVYPAQDIR--------------------VSNERDGPVVSRQVEALTGEARAQLEVLTTGMEGSGLGRAREDVEMISVVLDPRFKACCPIACVNGGNALKLKALTSVTAQLRRFKDAVLEPPVAGGGAAAGGDGDAGNAGVXXXXXAGRVPAVKLSRLEKMRQAQDRAL-----------------------------------GLGDSRGTGGGGSGGFGADDGGWRAEDAVRELGEYMLEAPSKKHGLLAYWKLHGTDTLDSGTGQVVLPARWPHLGLLARLYAGMETTSRQGERYCRG------DLGGAVDRLQRS-LPPSEVERMVVLRFNTDLL 471
            MGVPVL+CS +RL+ A + SLG    G A  D+     CAN  MRDVVRR   M++V E    +  V   A                            L  +R    RWT  H LF+RLL+LA PL A+FR  P  RSL+ +EWQA+RE  SI++PALEV+ KVH ++                 E   T+                        +G+F+AESI L+ANLH SF+YP QDIR                     +     P  S++V  LT EA+A LE +  GME SGLGRARED E +S++LDPRFK CC   CV+GG+ALKL+AL +V++QLR+F+D   E                     XXXXX        +SRL+KMRQAQ                                       G  D+R                  +EDA  EL EY+LE  SK+H LL+YW+LHGTDTLDSGTG+VVL ARWPHL L+ARLYAG+++TSRQGER+  G      +LG AV  LQR  +PP  +E+M+++R N  ++
Sbjct:  350 MGVPVLVCSSYRLHSAVSCSLGCAAAGGAGEDK-----CANAKMRDVVRRAVSMVEVFEHWRPEGGVFAAAXXXXXXXXXXXXXXXXXXXXXXXXXXAALARARGSTTRWTDSHALFERLLQLAGPLNAHFRQAPTDRSLQPSEWQAIRETASILEPALEVLAKVHAREEGXXXXXXXXEEGRRAAEGVGTSAAAAACNGGDRGAAGAAARDKKKPRGIFLAESIELHANLHCSFIYPLQDIRGDALATAATGEGVAAAPAMVAAGAGAAPFCSKRVAELTPEAQALLEAVAEGMEESGLGRAREDTEAVSMLLDPRFKQCCASTCVDGGSALKLRALKAVSSQLRKFRDPASEAGXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXVSRLDKMRQAQKMEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGEVDNR-----------------LSEDARAELEEYLLEPASKRHELLSYWRLHGTDTLDSGTGEVVLAARWPHLALVARLYAGIDSTSRQGERHFGGGSGGGAELGAAVRSLQRGGMPPWRIEQMLLVRLNRHVV 899          
BLAST of mRNA_D-herbacea_F_contig113.1027.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 1.290e-31
Identity = 132/476 (27.73%), Postives = 208/476 (43.70%), Query Frame = 0
Query:    1 MGVPVLLCSDHRLNCAATRSLGGGENGAAVSDEPDGGTCANRGMRDVVRRVRGMLDVVEESLRDEPVTLKAVRGEVGEMLVKLYVSRRPDARWTIQHDLFDRLLRLADPLEAYFRANP-DSRSLRSAEWQAVREATSIVDPALEVITKVHGKKSCPEDNATNQPQXXXXXXXXXXXXQGVFVAESINLYANLHQSFVYPAQDIRVSNERDGPVVSRQVEALTGEARAQLEVLTTGMEGSGLGRAREDVEMISVVLDPRFKACCPIACVNGGNALKLKALTSVTAQLRRFKDAVLEPPVAGGGAAAGGDGDAGNAGVXXXXXAGRVPAVKLSRLEKMRQAQDRALGLGDSRGTGGGGSGGFGADDGGWRAEDAV-RELGEYMLEAPSKK---HGLLAYWKLHGTDTLDSGTGQVVLPARWPHLGLLARLYAGMETTSRQGERYCRGDLGGAVDRLQRSLPPSEVERMVVLRFNTDLL 471
            +GVPV+ C+ HR+N A   +LG   NG             N+ M D+++++  ++ V   S  +    LK ++    ++     + RR D RWT Q  + DRLL L  P+  YFR  P +SR L   EW    E  S++    EV  ++ G K                            +++++ +   + +     +  IR  N  +   +  QV  L+  A+  LEVL   ME   +G+A + VE +S ++DPR K+       NG   L+ KA   + A + +F     EP  A           A    V     A +    KLSRLE+ R A+  A        + GG SG   A          + RE+  Y+ E    +     +L +W   GTD++ S TG V  PA  P+L  +ARL+ G+E +S Q ER     L   +  L+ ++   +VERM+++R N  L+
Sbjct:  378 LGVPVVKCNCHRVNTAVLWALGIAGNGRR-----------NKVMGDLMKKLAALVGVFSHSAVNND-KLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKD-------------------------THISQAMFIIHEVMEMLREDSHPIRAQNATEPEEM--QVLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAKLENGSATLRKKAEEDLKAVIAQFDVQPSEPAPA----------PAPVLNVDPVEPASK--RKKLSRLEERRAARVAAA-------SDGGASGSVQAQGSATNRRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSA-LSHLIGHLRCNMLSRKVERMMLIRLNRHLV 794          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig113.1027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G031_ECTSI5.600e-9238.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JRT6_9PHAE1.290e-3127.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig113contigD-herbacea_F_contig113:568785..571059 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig113.1027.1mRNA_D-herbacea_F_contig113.1027.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig113 553950..572029 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig113.1027.1 ID=prot_D-herbacea_F_contig113.1027.1|Name=mRNA_D-herbacea_F_contig113.1027.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=473bp
MGVPVLLCSDHRLNCAATRSLGGGENGAAVSDEPDGGTCANRGMRDVVRR
VRGMLDVVEESLRDEPVTLKAVRGEVGEMLVKLYVSRRPDARWTIQHDLF
DRLLRLADPLEAYFRANPDSRSLRSAEWQAVREATSIVDPALEVITKVHG
KKSCPEDNATNQPQQQQQQQQDQQQQQGVFVAESINLYANLHQSFVYPAQ
DIRVSNERDGPVVSRQVEALTGEARAQLEVLTTGMEGSGLGRAREDVEMI
SVVLDPRFKACCPIACVNGGNALKLKALTSVTAQLRRFKDAVLEPPVAGG
GAAAGGDGDAGNAGVAAAGGAGRVPAVKLSRLEKMRQAQDRALGLGDSRG
TGGGGSGGFGADDGGWRAEDAVRELGEYMLEAPSKKHGLLAYWKLHGTDT
LDSGTGQVVLPARWPHLGLLARLYAGMETTSRQGERYCRGDLGGAVDRLQ
RSLPPSEVERMVVLRFNTDLLV*
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