prot_D-herbacea_F_contig111.961.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig111.961.1
Unique Nameprot_D-herbacea_F_contig111.961.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length98
Homology
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BLAST of mRNA_D-herbacea_F_contig111.961.1 vs. uniprot
Match: A0A6H5JNG5_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNG5_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 3.950e-8
Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 0 
Query:    3 EGALDSFWVYDLDPNYDPSAAEEPEPANCPGCEGCAQIRRNLEEQSERNAELERTITALSESRGDVLLENRNLKARLRSLERGGG 87
            E +L SFW YDL P  +P     P+ A    C  CA+ +  LE++   N +L R+I  L+ S+ +V+ E    +A+LRSLE GGG
Sbjct:   56 EESLSSFWDYDLQPRLEPP----PKRAKSSSCPLCAKKQAKLEQEQATNVDLVRSIADLTRSKAEVVGELEAARAKLRSLEHGGG 136
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BLAST of mRNA_D-herbacea_F_contig111.961.1 vs. uniprot
Match: D7FI69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI69_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 3.480e-7
Identity = 32/81 (39.51%), Postives = 44/81 (54.32%), Query Frame = 0 
Query:    3 EGALDSFWVYDLDPNYDPSAAEEPEPANCPGCEGCAQIRRNLEEQSERNAELERTITALSESRGDVLLENRNLKARLRSLE 83
            E +L SFW YDL P  +P        A    C  CA+ +  LE++   N EL R+I  LS S+ +V+ E    +A+LRSLE
Sbjct:    5 EESLSSFWDYDLQPRLEPPTKR----AKSSSCPLCAKKQAKLEQEQATNVELVRSIADLSRSKAEVVRELEAARAKLRSLE 81
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig111.961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JNG5_9PHAE3.950e-840.00Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FI69_ECTSI3.480e-739.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 37..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig111contigD-herbacea_F_contig111:705317..716350 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig111.961.1mRNA_D-herbacea_F_contig111.961.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig111 705317..716391 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig111.961.1 ID=prot_D-herbacea_F_contig111.961.1|Name=mRNA_D-herbacea_F_contig111.961.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=98bp
MAEGALDSFWVYDLDPNYDPSAAEEPEPANCPGCEGCAQIRRNLEEQSER
NAELERTITALSESRGDVLLENRNLKARLRSLERGGGVPHPAPPDPDG
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