prot_D-herbacea_F_contig1105.933.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1105.933.1
Unique Nameprot_D-herbacea_F_contig1105.933.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length158
Homology
BLAST of mRNA_D-herbacea_F_contig1105.933.1 vs. uniprot
Match: A0A6A3PU23_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3PU23_9STRA)

HSP 1 Score: 109 bits (272), Expect = 6.000e-27
Identity = 66/158 (41.77%), Postives = 91/158 (57.59%), Query Frame = 0
Query:    2 ESMVKRFGVKKATKI--PAASRVSTLSKADGPRNPEEKKYIRKFPYREAVGTLIWTAMMTRPDIGCAVRDVARFCENPGPV-------ILQYLLHTKGWGITYDGQGCGLCMEAYRDSDFGACLDKRRSVSGAVLMLAKGAISWRSRMQEVTASGTSE 150
            ES++K+FG + A     P    V  L+KAD P+  E+K  ++  PYR  VG+L++ A  TRPDI  AV  ++RF ENPG         +++YLL TK  GI YDG   G  +EAY D+D+    D R SVSG +LML    + WRS  Q+  A  ++E
Sbjct:   15 ESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRHSVSGTLLMLCDAPVMWRSTFQKTVALSSTE 170          
BLAST of mRNA_D-herbacea_F_contig1105.933.1 vs. uniprot
Match: A0A6A3SPB0_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SPB0_9STRA)

HSP 1 Score: 111 bits (277), Expect = 6.940e-27
Identity = 71/171 (41.52%), Postives = 98/171 (57.31%), Query Frame = 0
Query:    2 ESMVKRFGVKKA----TKIPAASRVSTLSKADGPRNPEEKKYIRKFPYREAVGTLIWTAMMTRPDIGCAVRDVARFCENPGPV-------ILQYLLHTKGWGITYDGQGCGLCMEAYRDSDFGACLDKRRSVSGAVLMLAKGAISWRSRMQEVTASGTSE----VLSEVVK 157
            ES++K+FG + A    T +    R   L+KAD P+  E+K  ++  PYR  VG+L++ A  TRPDI  AV  ++RF ENPG         +++YLL TK  GI YDG   G  +EAY D+D+    D RRSVSG +LML    + WRS  Q+  A  ++E     LS+ VK
Sbjct:   15 ESIIKKFGQENAKPCLTPLEPGVR---LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEGEYMALSDCVK 181          
BLAST of mRNA_D-herbacea_F_contig1105.933.1 vs. uniprot
Match: A0A6A3J149_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3J149_9STRA)

HSP 1 Score: 111 bits (277), Expect = 6.940e-27
Identity = 71/171 (41.52%), Postives = 98/171 (57.31%), Query Frame = 0
Query:    2 ESMVKRFGVKKA----TKIPAASRVSTLSKADGPRNPEEKKYIRKFPYREAVGTLIWTAMMTRPDIGCAVRDVARFCENPGPV-------ILQYLLHTKGWGITYDGQGCGLCMEAYRDSDFGACLDKRRSVSGAVLMLAKGAISWRSRMQEVTASGTSE----VLSEVVK 157
            ES++K+FG + A    T +    R   L+KAD P+  E+K  ++  PYR  VG+L++ A  TRPDI  AV  ++RF ENPG         +++YLL TK  GI YDG   G  +EAY D+D+    D RRSVSG +LML    + WRS  Q+  A  ++E     LS+ VK
Sbjct:   15 ESIIKKFGQENAKPCLTPLEPGVR---LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEDEYMALSDCVK 181          
BLAST of mRNA_D-herbacea_F_contig1105.933.1 vs. uniprot
Match: A0A6G0Q496_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0Q496_9STRA)

HSP 1 Score: 109 bits (273), Expect = 7.290e-27
Identity = 71/169 (42.01%), Postives = 96/169 (56.80%), Query Frame = 0
Query:    2 ESMVKRFGVKKATK--IPAASRVSTLSKADGPRNPEEKKYIRKFPYREAVGTLIWTAMMTRPDIGCAVRDVARFCENPGPV-------ILQYLLHTKGWGITYDGQGCGLCMEAYRDSDFGACLDKRRSVSGAVLMLAKGAISWRSRMQEVTASGTSEV----LSEVVK 157
            ES++K+FG + A     P    V  L+KAD P+  E+K  ++  PYR  VG+L++ A  TRPDI  AV  ++RF ENPG         +++YLL TK  GI YDG   G   EAY D+D+    D RRSVSG +LML    + WRS  Q+  A  ++E     LS+ VK
Sbjct:   15 ESIIKKFGQENAKPWLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVK 181          
BLAST of mRNA_D-herbacea_F_contig1105.933.1 vs. uniprot
Match: A0A6A3GI70_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GI70_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.490e-26
Identity = 71/169 (42.01%), Postives = 97/169 (57.40%), Query Frame = 0
Query:    2 ESMVKRFGVKKATKI--PAASRVSTLSKADGPRNPEEKKYIRKFPYREAVGTLIWTAMMTRPDIGCAVRDVARFCENPGPV-------ILQYLLHTKGWGITYDGQGCGLCMEAYRDSDFGACLDKRRSVSGAVLMLAKGAISWRSRMQEVTASGTSEV----LSEVVK 157
            ES++K+FG + A     P    V  L+KAD P+  E+K  ++  PYR  VG+L++ A  TRPDI  AV  ++RF ENPG         +++YLL TK  GI YDG   G  +EAY D+D+    D RRSVSG +LML    + WRS  Q+  A  ++E     LS+ VK
Sbjct:   56 ESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVK 222          
BLAST of mRNA_D-herbacea_F_contig1105.933.1 vs. uniprot
Match: A0A6A3GCN4_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GCN4_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.640e-26
Identity = 71/169 (42.01%), Postives = 96/169 (56.80%), Query Frame = 0
Query:    2 ESMVKRFGVKKATKI--PAASRVSTLSKADGPRNPEEKKYIRKFPYREAVGTLIWTAMMTRPDIGCAVRDVARFCENPGPV-------ILQYLLHTKGWGITYDGQGCGLCMEAYRDSDFGACLDKRRSVSGAVLMLAKGAISWRSRMQEVTASGTSEV----LSEVVK 157
            ES++K+FG + A     P    V  L+KAD P+  E+K  ++  PYR  VG+L++ A  TRPDI  AV  ++RF ENPG         ++ YLL TK  GI YDG   G  +EAY D+D+    D RRSVSG +LML    + WRS  Q+  A  ++E     LS+ VK
Sbjct:  104 ESIIKKFGQENAKPYLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVHYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVK 270          
BLAST of mRNA_D-herbacea_F_contig1105.933.1 vs. uniprot
Match: A0A6A3VCN8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3VCN8_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.930e-26
Identity = 71/169 (42.01%), Postives = 97/169 (57.40%), Query Frame = 0
Query:    2 ESMVKRFGVK--KATKIPAASRVSTLSKADGPRNPEEKKYIRKFPYREAVGTLIWTAMMTRPDIGCAVRDVARFCENPGPV-------ILQYLLHTKGWGITYDGQGCGLCMEAYRDSDFGACLDKRRSVSGAVLMLAKGAISWRSRMQEVTASGTSEV----LSEVVK 157
            ES++K+FG +  K    P    V  L+KAD P+  E+K  ++  PYR  VG+L++ A  TRPDI  AV  ++RF ENPG         +++YLL TK  GI YDG   G  +EAY D+D+    D RRSVSG +LML    + WRS  Q+  A  ++E     LS+ VK
Sbjct:  112 ESIIKKFGQENTKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVK 278          
BLAST of mRNA_D-herbacea_F_contig1105.933.1 vs. uniprot
Match: A0A6A3Q8N8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q8N8_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.850e-25
Identity = 71/169 (42.01%), Postives = 96/169 (56.80%), Query Frame = 0
Query:    2 ESMVKRFGVKKATKI--PAASRVSTLSKADGPRNPEEKKYIRKFPYREAVGTLIWTAMMTRPDIGCAVRDVARFCENPGPV-------ILQYLLHTKGWGITYDGQGCGLCMEAYRDSDFGACLDKRRSVSGAVLMLAKGAISWRSRMQEVTASGTSEV----LSEVVK 157
            ES++K FG + A     P    V  L+KAD P+  E+K  ++  PYR  VG+L++ A  TRPD+  AV  ++RF ENPG          ++YLL TK  GI YDGQ  G  +EAY D+D+    D RRSVSG +LML    + WRS  Q+  A  ++E     LS+ VK
Sbjct:  361 ESIIKTFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSVVGSLMYLACGTRPDVSVAVAKLSRFLENPGEKHWDSGIKAVRYLLKTKDVGIVYDGQ-LGTHLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVK 527          
BLAST of mRNA_D-herbacea_F_contig1105.933.1 vs. uniprot
Match: A0A6A3YGI7_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YGI7_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.100e-25
Identity = 71/169 (42.01%), Postives = 98/169 (57.99%), Query Frame = 0
Query:    2 ESMVKRFGVKKATKI--PAASRVSTLSKADGPRNPEEKKYIRKFPYREAVGTLIWTAMMTRPDIGCAVRDVARFCENPGPV-------ILQYLLHTKGWGITYDGQGCGLCMEAYRDSDFGACLDKRRSVSGAVLMLAKGAISWRSRMQEVTASGTSEV----LSEVVK 157
            ES++K+FG + A     P    V  L+KAD P+  E+K  ++  PYR  VG+L++ A  TRPDI  AV  ++RF ENPG         +++YLL TK  GI YDG   G  +EAY D+D+    D RRSVSG +LML +  + WRS  Q+  A  ++E     LS+ VK
Sbjct:  659 ESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKLKPYRSLVGSLMYLARGTRPDISVAVAKLSRFPENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGAQLEAYSDADWAGNRDDRRSVSGMLLMLCRAPVVWRSTFQKTVALSSTEAEYLALSDCVK 825          
BLAST of mRNA_D-herbacea_F_contig1105.933.1 vs. uniprot
Match: A0A6A4F359_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F359_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.490e-25
Identity = 70/169 (41.42%), Postives = 97/169 (57.40%), Query Frame = 0
Query:    2 ESMVKRFGVKKATKI--PAASRVSTLSKADGPRNPEEKKYIRKFPYREAVGTLIWTAMMTRPDIGCAVRDVARFCENPGPV-------ILQYLLHTKGWGITYDGQGCGLCMEAYRDSDFGACLDKRRSVSGAVLMLAKGAISWRSRMQEVTASGTSEV----LSEVVK 157
            ES++K+FG + A     P    V  L+KAD P+  E+K  ++  PYR  VG+L++ A  TRPDI  AV  ++RF ENPG         +++YLL TK  GI YDG   G  +EAY D+D+    D RRSVSG +LM+    + WRS  Q+  A  ++E     LS+ VK
Sbjct:  136 ESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQIEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMMCGAPVVWRSTFQKTVALSSTEAEYMALSDCVK 302          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1105.933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A3PU23_9STRA6.000e-2741.77Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A6A3SPB0_9STRA6.940e-2741.52Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A6A3J149_9STRA6.940e-2741.52Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6G0Q496_9STRA7.290e-2742.01Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6A3GI70_9STRA1.490e-2642.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3GCN4_9STRA2.640e-2642.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3VCN8_9STRA4.930e-2642.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3Q8N8_9STRA1.850e-2542.01Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3YGI7_9STRA2.100e-2542.01Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A4F359_9STRA2.490e-2541.42Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1105contigD-herbacea_F_contig1105:57394..57867 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1105.933.1mRNA_D-herbacea_F_contig1105.933.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1105 57391..57867 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1105.933.1 ID=prot_D-herbacea_F_contig1105.933.1|Name=mRNA_D-herbacea_F_contig1105.933.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=158bp
MESMVKRFGVKKATKIPAASRVSTLSKADGPRNPEEKKYIRKFPYREAVG
TLIWTAMMTRPDIGCAVRDVARFCENPGPVILQYLLHTKGWGITYDGQGC
GLCMEAYRDSDFGACLDKRRSVSGAVLMLAKGAISWRSRMQEVTASGTSE
VLSEVVK*
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