prot_D-herbacea_F_contig1100.928.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1100.928.1
Unique Nameprot_D-herbacea_F_contig1100.928.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length328
Homology
BLAST of mRNA_D-herbacea_F_contig1100.928.1 vs. uniprot
Match: A0A6H5K768_9PHAE (FPL domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K768_9PHAE)

HSP 1 Score: 278 bits (712), Expect = 3.310e-81
Identity = 185/344 (53.78%), Postives = 210/344 (61.05%), Query Frame = 0
Query:    1 MSSLILRWSLDNRSPSQQPXXXXXXPLMPPSP--STASEKGGVGVVGVGVEGDGRLRQRELRSSLQAFLEIRQVWRLLSGKGETD-AVLSMAGLGREAEDGHLREGGYLDLDGRDCLACSVITTTMAGTPLDGGRSKGGRKQKRPAGAAAFAA--------NSRRGRSELYLVLDDNAFLLATPDRHRLTNGEVKSTAPLLHLASAPDPTDELRLHIRALSHHPVALMRPVTPPCPSTPRPPAAT--------SGRGFGTKGEAASKAMFGGRGGRGAGGGVVEAGGGDAGSMCDMQAWACELLFENTRSCDLAQKHMDVRRLRLRAEKTQSIVDLLVACVEGR 325
            MSSLILRWSLDN  PSQ+       P  PP P  S+ + +G          G GR RQRELRSSLQAFLE+RQV RLLSG+GE D +VLS+AGLG +A + H  E G LDL GR+CLACS         PL+GG                           + RRGRSE+YLVLDD AFLLATPDR+RL NGE+KS+APLLHLA+A DP D+ RL IRALSH PVALMRPV  P  STP              S     T   A S A             V  +GGGDAGSMCDMQAWACEL FEN RSC LA+KHM+ RRL LR+EKT+ I DLL ACV+GR
Sbjct: 1149 MSSLILRWSLDNSPPSQR------VPAAPPRPPPSSPTSQG----CAEADAGSGRARQRELRSSLQAFLEVRQVLRLLSGRGEADPSVLSIAGLGPQAAE-HPWEDGSLDLGGRECLACSFSE------PLEGGSXXXXXXXXXXXXXXXXXXXXXXXXXXSGRRGRSEMYLVLDDKAFLLATPDRNRLMNGEIKSSAPLLHLAAAVDPADDKRLLIRALSHSPVALMRPVAAPRASTPXXXXXXXXXXXXXXSSSNVATTEGAVSGAS------------VESSGGGDAGSMCDMQAWACELAFENERSCRLARKHMEDRRLWLRSEKTKCITDLLEACVQGR 1463          
BLAST of mRNA_D-herbacea_F_contig1100.928.1 vs. uniprot
Match: D7FXA7_ECTSI (FPL domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA7_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 6.510e-79
Identity = 184/343 (53.64%), Postives = 212/343 (61.81%), Query Frame = 0
Query:    1 MSSLILRWSLDNRSPSQQ-PXXXXXXPLMPPSPSTASEKGGVGVVGVGVEGDGRLRQRELRSSLQAFLEIRQVWRLLSGKGETD-AVLSMAGLGREAEDGHLREGGYLDLDGRDCLACSVITTTMAGTPLDGGRSKGGRKQKRPAGAAAFAA----------NSRRGRSELYLVLDDNAFLLATPDRHRLTNGEVKSTAPLLHLASAPDPTDELRLHIRALSHHPVALMRPVTPPCPSTPRPPAATSGRGFGTKGEAASKAMFGGRGGRGAGGGVVEAGGG------DAGSMCDMQAWACELLFENTRSCDLAQKHMDVRRLRLRAEKTQSIVDLLVACVEGR 325
            MSSLILRWSLDN  PSQ+ P   XXX          +E  G         G+GR RQRELRSSLQAFLE+RQV RLLSG+GE D +VLS+AGLG +AE+ H  E G LDL GR+CLACS+  +      L+GG S  GR                       + RRGRSE+YLVLDD AFLLATPDR+RL NGE+KS+APLLHLA+A DP D+ RL IRALSH PVALMRPV  P  STPR   +++G                         G V           DAGSMCDMQAWACEL FEN RSC LA+KHM+ RRLRLR+EKT+ I DLL ACV+GR
Sbjct:  697 MSSLILRWSLDNSPPSQRVPAPPXXXXXXXXXSQGCAEADG---------GNGRARQRELRSSLQAFLEVRQVLRLLSGRGEADPSVLSIAGLGPQAEE-HPWEDGSLDLGGRECLACSISES------LEGGSS--GRXXXXXXXXXXXXXXXXXXXXXXXSGRRGRSEMYLVLDDKAFLLATPDRNRLMNGEIKSSAPLLHLAAAVDPADDKRLLIRALSHSPVALMRPVAAPRASTPR---SSTGXXXXXXXXXXXXXXX---------XGAVSXXXXXXXXXXDAGSMCDMQAWACELTFENERSCRLARKHMEGRRLRLRSEKTKCITDLLEACVQGR 1009          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1100.928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K768_9PHAE3.310e-8153.78FPL domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FXA7_ECTSI6.510e-7953.64FPL domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1100contigD-herbacea_F_contig1100:39031..45976 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1100.928.1mRNA_D-herbacea_F_contig1100.928.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1100 38916..47727 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1100.928.1 ID=prot_D-herbacea_F_contig1100.928.1|Name=mRNA_D-herbacea_F_contig1100.928.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=328bp
MSSLILRWSLDNRSPSQQPPPPPTTPLMPPSPSTASEKGGVGVVGVGVEG
DGRLRQRELRSSLQAFLEIRQVWRLLSGKGETDAVLSMAGLGREAEDGHL
REGGYLDLDGRDCLACSVITTTMAGTPLDGGRSKGGRKQKRPAGAAAFAA
NSRRGRSELYLVLDDNAFLLATPDRHRLTNGEVKSTAPLLHLASAPDPTD
ELRLHIRALSHHPVALMRPVTPPCPSTPRPPAATSGRGFGTKGEAASKAM
FGGRGGRGAGGGVVEAGGGDAGSMCDMQAWACELLFENTRSCDLAQKHMD
VRRLRLRAEKTQSIVDLLVACVEGRDE*
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