prot_D-herbacea_F_contig110.906.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig110.906.1
Unique Nameprot_D-herbacea_F_contig110.906.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length129
Homology
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BLAST of mRNA_D-herbacea_F_contig110.906.1 vs. uniprot
Match: D8LTX1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTX1_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 7.690e-28
Identity = 84/141 (59.57%), Postives = 95/141 (67.38%), Query Frame = 0 
Query:    1 MSAKIAKRMMASVDDMVSRASLATKRTDLTTSKRKAAKRALLGAPSKR--SGKEGAVVSKSGSISKK-ARKSARRPKMGLLEQARIELRGKSRAVRNVSLLSY-------AVPPDSVKGA---------KSRKAVDHLLRL 122
            MS+KIAKRMM+ VD+MVSRAS ATKRTDL+TSK+KAAKRALL APSKR  SG      S S S++KK AR  A R  MGLL++AR ELRGKS   RNVSLLSY       A    +  GA         KSRKAV+HLL L
Sbjct:    1 MSSKIAKRMMSRVDEMVSRASSATKRTDLSTSKKKAAKRALLQAPSKRKGSGSTSVATSSSRSVTKKSARNKAGRRTMGLLDKARRELRGKSLVARNVSLLSYSSRGEGRAAGAGADSGAAKVGGGVASKSRKAVEHLLLL 141
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig110.906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTX1_ECTSI7.690e-2859.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig110contigD-herbacea_F_contig110:470579..473449 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig110.906.1mRNA_D-herbacea_F_contig110.906.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig110 469701..473628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig110.906.1 ID=prot_D-herbacea_F_contig110.906.1|Name=mRNA_D-herbacea_F_contig110.906.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=129bp
MSAKIAKRMMASVDDMVSRASLATKRTDLTTSKRKAAKRALLGAPSKRSG
KEGAVVSKSGSISKKARKSARRPKMGLLEQARIELRGKSRAVRNVSLLSY
AVPPDSVKGAKSRKAVDHLLRLGQGGAK*
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