prot_D-herbacea_F_contig109.780.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig109.780.1
Unique Nameprot_D-herbacea_F_contig109.780.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length362
Homology
BLAST of mRNA_D-herbacea_F_contig109.780.1 vs. uniprot
Match: D7FL74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL74_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 2.520e-92
Identity = 138/258 (53.49%), Postives = 181/258 (70.16%), Query Frame = 0
Query:   52 SDVSAARLEPVFLAAESEDGAAAEGSPADPEACQTVVFFHIPKTGGESLNDLWREKPNSQRLFGWEN-YRWIGLRTTGLGHEQQKRVMTNLRPWMSVEPMKRHSVLELHCGDALSFMQAKQALATMRVNHEKNNCGLYAFTILRSPLEWVVSLYDDICHRRLRGHKESCPQKEDMTSRQEMLEFPHKDGMVSYLLHGWDGWNSPGPVDEFDVEDVSEVLRGSLDLVVTTKEVPKLRHFLTTRFAARAGSLTAEQEETL 308
            +D S A   PV     S +GA    +P DP+ CQT++FFHIPKTGGES+N L   +P  Q    W++ Y W   R TGL   +QK  + +++PW+   P +RH ++E HCGDALSFMQA++AL TMR  H KN+CG +AFT++R PLEW+VSLYDD+CHRRLRGHK++CPQ++ MT +QEML +PH+DG+VSYL HG+ GW SPGPVDE  VE++ E     LDLV  T EVP++R +LT RF A  G LT + E+ L
Sbjct:   62 ADKSGAPAAPVS----SGEGATTSRAPWDPQGCQTILFFHIPKTGGESINQL---RPGIQ---WWKSAYDWSSFRITGLELTEQKNHLKSMKPWLKESPSQRHKLIEFHCGDALSFMQAREALETMRHEHAKNDCGFFAFTMVRPPLEWLVSLYDDLCHRRLRGHKDTCPQQDSMTPKQEMLAYPHRDGLVSYLAHGFKGWASPGPVDEGTVEEMLESFGRHLDLVALTSEVPQIRRYLTKRFVAPHGVLTPQVEDAL 309          
BLAST of mRNA_D-herbacea_F_contig109.780.1 vs. uniprot
Match: D7G147_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G147_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 7.680e-87
Identity = 122/214 (57.01%), Postives = 159/214 (74.30%), Query Frame = 0
Query:  134 QKRVMTNLRPWMSVEPMKRHSVLELHCGDALSFMQAKQALATMRVNHEKNNCGLYAFTILRSPLEWVVSLYDDICHRRLRGHKESCPQKEDMTSRQEMLEFPHKDGMVSYLLHGWDGWNSPGPVDEFDVEDVSEVLRGSLDLVVTTKEVPKLRHFLTTRFAARAGSLTAEQEETLKGREVQNVNMEKTVTVSDFTQDELQRLNATVQLDWKLYQ 347
            + R    L+PW+   P +RH ++E HCGDALSFMQA++AL TMR  H KN+CG +AFT++R PLEW+VSLYDD+CHRRL+GHKE+CPQ+  MT +QEML +PH+DG+VSYL HG++GW SPG VDE  VE++ E     LDLV  T EVP++R +LT RF A  G LT + E+ L   E+QN N  KT+ +SDF  DEL +LN+T+QLDW LY+
Sbjct:   11 EARETLTLKPWLQESPSQRHKLIEFHCGDALSFMQAREALETMRHEHAKNDCGFFAFTMVRQPLEWLVSLYDDLCHRRLKGHKETCPQQNSMTPKQEMLAYPHRDGLVSYLAHGFNGWASPGSVDERTVEEILESFGRHLDLVALTSEVPQIRRYLTRRFVAPHGVLTPQVEDNLDRGELQNANKVKTIRLSDFDPDELAQLNSTIQLDWMLYE 224          
BLAST of mRNA_D-herbacea_F_contig109.780.1 vs. uniprot
Match: A0A6H5J9V3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V3_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 3.090e-84
Identity = 120/208 (57.69%), Postives = 156/208 (75.00%), Query Frame = 0
Query:  142 RPWMSVEPMKRHSVLELHCGDALSFMQAKQALATMRVNHEKNNCGLYAFTILRSPLEWVVSLYDDICHRRLRGHKESCPQK--EDMTSRQEMLEFPHKDGMVSYLLHGWDGWNSPGPVDEFDVEDVSEVLRGSLDLVVTTKEVPKLRHFLTTRFAARAGSLTAEQEETLKGREVQNVNMEKTVTVSDFTQDELQRLNATVQLDWKLYQ 347
            +PW+   P  RH ++E HCGDALS MQA++AL TMR  H KN+CG +AFT++R PLEW+VSLYDD+CHRRLRGHK++CPQ+  + MT +QEML +PH+DG+VSYL HG++GW SPGPVDE  VE++ E     LDLV  T EVP++R +LT RF A  G LT + E+ L   E+QN N  KT+ +SDF  DEL +LN+T+QLDW LY+
Sbjct:    9 KPWLKESPSHRHKLIEFHCGDALSLMQAREALETMRHEHAKNDCGFFAFTMVRPPLEWLVSLYDDLCHRRLRGHKDTCPQQAGDSMTPKQEMLAYPHRDGLVSYLAHGFNGWASPGPVDEGTVEEILESFGRHLDLVALTSEVPQIRRYLTKRFVAPHGVLTPQVEDALHRGELQNANKVKTIRLSDFDPDELAQLNSTIQLDWMLYE 216          
BLAST of mRNA_D-herbacea_F_contig109.780.1 vs. uniprot
Match: A0A6H5K7U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U3_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.520e-8
Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 0
Query:   68 SEDGAAAEGSPADPEACQTVVFFHIPKTGGESLNDLWREKPNSQRLFGWENYRWIGLRTT 127
            S +GA    +P DP+ CQT++FFHIPKTGGES+N L    P  +  + W ++R  GL  T
Sbjct:   72 SGEGATTSRAPWDPQGCQTILFFHIPKTGGESINQLRPGVPWWKSAYDWSSFRITGLELT 131          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig109.780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FL74_ECTSI2.520e-9253.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G147_ECTSI7.680e-8757.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9V3_9PHAE3.090e-8457.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7U3_9PHAE1.520e-846.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005331SulfotransferasePFAMPF03567Sulfotransfer_2coord: 86..248
e-value: 1.4E-4
score: 21.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 24..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 36..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..361
NoneNo IPR availableTMHMMTMhelixcoord: 21..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig109contigD-herbacea_F_contig109:679141..718956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig109.780.1mRNA_D-herbacea_F_contig109.780.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig109 679014..719541 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig109.780.1 ID=prot_D-herbacea_F_contig109.780.1|Name=mRNA_D-herbacea_F_contig109.780.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=362bp
MRGPANAHIGATACRTKANRILRALTGAALLLTLAYGVQTARSGWVVLKN
PSDVSAARLEPVFLAAESEDGAAAEGSPADPEACQTVVFFHIPKTGGESL
NDLWREKPNSQRLFGWENYRWIGLRTTGLGHEQQKRVMTNLRPWMSVEPM
KRHSVLELHCGDALSFMQAKQALATMRVNHEKNNCGLYAFTILRSPLEWV
VSLYDDICHRRLRGHKESCPQKEDMTSRQEMLEFPHKDGMVSYLLHGWDG
WNSPGPVDEFDVEDVSEVLRGSLDLVVTTKEVPKLRHFLTTRFAARAGSL
TAEQEETLKGREVQNVNMEKTVTVSDFTQDELQRLNATVQLDWKLYQHFA
RGPRPWSTSRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005331Sulfotransferase