prot_D-herbacea_F_contig109.779.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig109.779.1
Unique Nameprot_D-herbacea_F_contig109.779.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length296
Homology
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BLAST of mRNA_D-herbacea_F_contig109.779.1 vs. uniprot
Match: D7G3H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H8_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 7.710e-18
Identity = 56/105 (53.33%), Postives = 73/105 (69.52%), Query Frame = 0 
Query:  176 LSARVSVGAFCRTVVARVTMVDPEVGGTVKHSFTWELLEP-----PSKEATTANVLEGVARVRQILLSARSLRLAGDEDD-AVRGVSLRSEEIAKRCRMHGVVWM 274
            ++ARVS  AFCR VVARVT+ DP+VGGT+K S +WELLEP     P  +A+  N  +  A +R+ L SA+SL LAG  DD A R  + RSEEI KRC +HGV+++
Sbjct:    1 MAARVSTEAFCRAVVARVTVRDPKVGGTLKTSCSWELLEPSASPVPVGKASREN--KSTASIRRQLRSAQSLGLAGTRDDGAERLATQRSEEIVKRCGIHGVLYI 103
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig109.779.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3H8_ECTSI7.710e-1853.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig109contigD-herbacea_F_contig109:656479..678648 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig109.779.1mRNA_D-herbacea_F_contig109.779.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig109 656479..678863 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig109.779.1 ID=prot_D-herbacea_F_contig109.779.1|Name=mRNA_D-herbacea_F_contig109.779.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=296bp
MMRRDHQHWQGKKAPARPGVREVTDGVFLYTTRVHGGGGGGVGPTFIYEV
ESARADLRGVSFAIDFSGSANIVVLKPSSTTLTVPNSEGNAASKKRTTAT
ATTAATTSTATATAKTNNNAVVDDGMGGKRGGTRKSGVTDTGLSLAKACG
ENNEPMKDDDEDRVFADEDGEGSSLLSARVSVGAFCRTVVARVTMVDPEV
GGTVKHSFTWELLEPPSKEATTANVLEGVARVRQILLSARSLRLAGDEDD
AVRGVSLRSEEIAKRCRMHGVVWMQEGWLVCLSTPSDTGEGRGPGA
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